RNA–Protein interactions for RNA: ENST00000332904.7

CDHR1-201, Transcript of cadherin related family member 1, humanhuman

TSL 1 (best) BASIC

Gene CDHR1, Length 2,694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1-201ENST00000332904 GSDMAQ96QA5 445 aa20.22■□□□□ 0.83
CDHR1-201ENST00000332904 AGPAT5Q9NUQ2 364 aa20.22■□□□□ 0.83
CDHR1-201ENST00000332904 ZSWIM5Q9P217 1185 aa20.22■□□□□ 0.83
CDHR1-201ENST00000332904 RDXP35241 583 aaKnown RBP20.22■□□□□ 0.83
CDHR1-201ENST00000332904 NNTQ13423 1086 aa20.22■□□□□ 0.83
CDHR1-201ENST00000332904 OPA1O60313 960 aa20.21■□□□□ 0.83
CDHR1-201ENST00000332904 SSBP05455 408 aaKnown RBP eCLIP20.21■□□□□ 0.83
CDHR1-201ENST00000332904 ELF1P32519 619 aa20.21■□□□□ 0.83
CDHR1-201ENST00000332904 LSP1P33241 339 aa20.21■□□□□ 0.83
CDHR1-201ENST00000332904 NAP1L1P55209 391 aaKnown RBP20.21■□□□□ 0.83
CDHR1-201ENST00000332904 DDR1Q08345 913 aa20.21■□□□□ 0.83
CDHR1-201ENST00000332904 CREG2Q8IUH2 290 aa20.21■□□□□ 0.83
CDHR1-201ENST00000332904 FOXP1Q9H334 677 aaPredicted RBP20.21■□□□□ 0.83
CDHR1-201ENST00000332904 KLC4Q9NSK0 619 aa20.21■□□□□ 0.83
CDHR1-201ENST00000332904 GDAQ9Y2T3 454 aa20.21■□□□□ 0.83
CDHR1-201ENST00000332904 XDHP47989 1333 aa20.21■□□□□ 0.83
CDHR1-201ENST00000332904 CCDC189A1A4V9 331 aa20.21■□□□□ 0.83
CDHR1-201ENST00000332904 KRT86O43790 486 aa20.21■□□□□ 0.83
CDHR1-201ENST00000332904 KLK7P49862 253 aa20.21■□□□□ 0.83
CDHR1-201ENST00000332904 SKOR1P84550 965 aa20.21■□□□□ 0.83
CDHR1-201ENST00000332904 IFT88Q13099 833 aa20.21■□□□□ 0.83
CDHR1-201ENST00000332904 AMOTL1Q8IY63 956 aa20.21■□□□□ 0.83
CDHR1-201ENST00000332904 SHISA4Q96DD7 197 aa20.21■□□□□ 0.83
CDHR1-201ENST00000332904 MCM8Q9UJA3 840 aa20.21■□□□□ 0.83
CDHR1-201ENST00000332904 TACC3Q9Y6A5 838 aa20.21■□□□□ 0.83
CDHR1-201ENST00000332904 MYH13Q9UKX3 1938 aa20.21■□□□□ 0.83
CDHR1-201ENST00000332904 PLEKHG1Q9ULL1 1385 aa20.21■□□□□ 0.83
CDHR1-201ENST00000332904 H7C1W4 665 aa20.2■□□□□ 0.82
CDHR1-201ENST00000332904 HDLBPQ00341 1268 aaKnown RBP20.2■□□□□ 0.82
CDHR1-201ENST00000332904 PAK1Q13153 545 aa20.2■□□□□ 0.82
CDHR1-201ENST00000332904 NEDD9Q14511 834 aa20.2■□□□□ 0.82
CDHR1-201ENST00000332904 RRP12Q5JTH9 1297 aaKnown RBP20.2■□□□□ 0.82
CDHR1-201ENST00000332904 KRT26Q7Z3Y9 468 aa20.2■□□□□ 0.82
CDHR1-201ENST00000332904 CHUKO15111 745 aa20.2■□□□□ 0.82
CDHR1-201ENST00000332904 IFNAR1P17181 557 aa20.2■□□□□ 0.82
CDHR1-201ENST00000332904 TRIM14Q14142 442 aa20.2■□□□□ 0.82
CDHR1-201ENST00000332904 CEP57Q86XR8 500 aa20.2■□□□□ 0.82
CDHR1-201ENST00000332904 IRF2BP1Q8IU81 584 aa20.2■□□□□ 0.82
CDHR1-201ENST00000332904 CCDC13Q8IYE1 715 aa20.2■□□□□ 0.82
CDHR1-201ENST00000332904 SLC52A2Q9HAB3 445 aa20.2■□□□□ 0.82
CDHR1-201ENST00000332904 AATFQ9NY61 560 aaKnown RBP eCLIP20.2■□□□□ 0.82
CDHR1-201ENST00000332904 WDR17Q8IZU2 1322 aa20.2■□□□□ 0.82
CDHR1-201ENST00000332904 FRMD3A2A2Y4 597 aa20.2■□□□□ 0.82
CDHR1-201ENST00000332904 HSF2BPO75031 334 aa20.2■□□□□ 0.82
CDHR1-201ENST00000332904 SF3B2Q13435 895 aaKnown RBP20.2■□□□□ 0.82
CDHR1-201ENST00000332904 PPP2R5AQ15172 486 aa20.2■□□□□ 0.82
CDHR1-201ENST00000332904 KIRREL3Q8IZU9 778 aa20.2■□□□□ 0.82
CDHR1-201ENST00000332904 ZNF622Q969S3 477 aaKnown RBP eCLIP20.2■□□□□ 0.82
CDHR1-201ENST00000332904 TMEM87BQ96K49 555 aa20.2■□□□□ 0.82
CDHR1-201ENST00000332904 DNAJC7Q99615 494 aa20.2■□□□□ 0.82
CDHR1-201ENST00000332904 MTRQ99707 1265 aa20.2■□□□□ 0.82
CDHR1-201ENST00000332904 A1CFQ9NQ94 594 aaKnown RBP20.2■□□□□ 0.82
CDHR1-201ENST00000332904 IDH1O75874 414 aaKnown RBP20.19■□□□□ 0.82
CDHR1-201ENST00000332904 TTLL7Q6ZT98 887 aa20.19■□□□□ 0.82
CDHR1-201ENST00000332904 RPAINQ86UA6 219 aa20.19■□□□□ 0.82
CDHR1-201ENST00000332904 SGMS1Q86VZ5 419 aa20.19■□□□□ 0.82
CDHR1-201ENST00000332904 TRIM22Q8IYM9 498 aa20.19■□□□□ 0.82
CDHR1-201ENST00000332904 SPATA4Q8NEY3 305 aa20.19■□□□□ 0.82
CDHR1-201ENST00000332904 NUP133Q8WUM0 1156 aa20.19■□□□□ 0.82
CDHR1-201ENST00000332904 CEP131Q9UPN4 1083 aa20.19■□□□□ 0.82
CDHR1-201ENST00000332904 AXIN2Q9Y2T1 843 aa20.19■□□□□ 0.82
CDHR1-201ENST00000332904 CAPN6Q9Y6Q1 641 aa20.19■□□□□ 0.82
CDHR1-201ENST00000332904 TRIM75PA6NK02 468 aa20.19■□□□□ 0.82
CDHR1-201ENST00000332904 PDHBP11177 359 aa20.19■□□□□ 0.82
CDHR1-201ENST00000332904 ZNF174Q15697 407 aa20.19■□□□□ 0.82
CDHR1-201ENST00000332904 TSR1Q2NL82 804 aaKnown RBP20.19■□□□□ 0.82
CDHR1-201ENST00000332904 CCDC40Q4G0X9 1142 aa20.19■□□□□ 0.82
CDHR1-201ENST00000332904 CCDC70Q6NSX1 233 aa20.19■□□□□ 0.82
CDHR1-201ENST00000332904 NFRKBQ6P4R8 1299 aa20.19■□□□□ 0.82
CDHR1-201ENST00000332904 MB21D1Q8N884 522 aa20.19■□□□□ 0.82
CDHR1-201ENST00000332904 ZNF473Q8WTR7 871 aaKnown RBP20.19■□□□□ 0.82
CDHR1-201ENST00000332904 ESYT3A0FGR9 886 aa20.18■□□□□ 0.82
CDHR1-201ENST00000332904 ZSCAN5CA6NGD5 496 aaPredicted RBP20.18■□□□□ 0.82
CDHR1-201ENST00000332904 PARP1P09874 1014 aaKnown RBP20.18■□□□□ 0.82
CDHR1-201ENST00000332904 MIEF2Q96C03 454 aa20.18■□□□□ 0.82
CDHR1-201ENST00000332904 RWDD2AQ9UIY3 292 aa20.18■□□□□ 0.82
CDHR1-201ENST00000332904 ODF2LQ9ULJ1 636 aa20.18■□□□□ 0.82
CDHR1-201ENST00000332904 STK36Q9NRP7 1315 aa20.18■□□□□ 0.82
CDHR1-201ENST00000332904 PRDM1O75626 825 aa20.18■□□□□ 0.82
CDHR1-201ENST00000332904 PAX7P23759 505 aa20.18■□□□□ 0.82
CDHR1-201ENST00000332904 PMS1P54277 932 aaKnown RBP20.18■□□□□ 0.82
CDHR1-201ENST00000332904 RTN1Q16799 776 aa20.18■□□□□ 0.82
CDHR1-201ENST00000332904 SPRED3Q2MJR0 410 aa20.18■□□□□ 0.82
CDHR1-201ENST00000332904 LMOD2Q6P5Q4 547 aa20.18■□□□□ 0.82
CDHR1-201ENST00000332904 NHEJ1Q9H9Q4 299 aaPredicted RBP20.18■□□□□ 0.82
CDHR1-201ENST00000332904 MLXIPQ9HAP2 919 aa20.18■□□□□ 0.82
CDHR1-201ENST00000332904 LRWD1Q9UFC0 647 aa20.18■□□□□ 0.82
CDHR1-201ENST00000332904 ZNF233A6NK53 670 aa20.17■□□□□ 0.82
CDHR1-201ENST00000332904 C21orf2O43822 256 aa20.17■□□□□ 0.82
CDHR1-201ENST00000332904 SNRPA1P09661 255 aaKnown RBP20.17■□□□□ 0.82
CDHR1-201ENST00000332904 FAM153BP0C7A2 387 aa20.17■□□□□ 0.82
CDHR1-201ENST00000332904 NF2P35240 595 aa20.17■□□□□ 0.82
CDHR1-201ENST00000332904 MCAMP43121 646 aa20.17■□□□□ 0.82
CDHR1-201ENST00000332904 KRT83P78385 493 aa20.17■□□□□ 0.82
CDHR1-201ENST00000332904 FAM153CQ494X1 144 aa20.17■□□□□ 0.82
CDHR1-201ENST00000332904 PREPLQ4J6C6 727 aaPredicted RBP20.17■□□□□ 0.82
CDHR1-201ENST00000332904 PLBD2Q8NHP8 589 aa20.17■□□□□ 0.82
CDHR1-201ENST00000332904 WASF1Q92558 559 aa20.17■□□□□ 0.82
CDHR1-201ENST00000332904 EPN3Q9H201 632 aa20.17■□□□□ 0.82
CDHR1-201ENST00000332904 SLC40A1Q9NP59 571 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms