RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 USP17L22D6RA61 530 aa18.8■□□□□ 0.6
LRRC28-202ENST00000331450 USP17L17D6RBQ6 530 aa18.8■□□□□ 0.6
LRRC28-202ENST00000331450 USP17L19D6RCP7 530 aa18.8■□□□□ 0.6
LRRC28-202ENST00000331450 USP17L20D6RJB6 530 aa18.8■□□□□ 0.6
LRRC28-202ENST00000331450 USP17L24Q0WX57 530 aa18.8■□□□□ 0.6
LRRC28-202ENST00000331450 TMTC2Q8N394 836 aa18.8■□□□□ 0.6
LRRC28-202ENST00000331450 ASCC2Q9H1I8 757 aaPredicted RBP18.8■□□□□ 0.6
LRRC28-202ENST00000331450 RNF186Q9NXI6 227 aa18.8■□□□□ 0.6
LRRC28-202ENST00000331450 SAGE1Q9NXZ1 904 aa18.8■□□□□ 0.6
LRRC28-202ENST00000331450 CA12O43570 354 aa18.79■□□□□ 0.6
LRRC28-202ENST00000331450 RAD21O60216 631 aa18.79■□□□□ 0.6
LRRC28-202ENST00000331450 BMP3P12645 472 aa18.79■□□□□ 0.6
LRRC28-202ENST00000331450 TROAPQ12815 778 aa18.79■□□□□ 0.6
LRRC28-202ENST00000331450 TAF1CQ15572 869 aaPredicted RBP18.79■□□□□ 0.6
LRRC28-202ENST00000331450 Q6ZUG5 572 aa18.79■□□□□ 0.6
LRRC28-202ENST00000331450 PARK7Q99497 189 aaKnown RBP18.79■□□□□ 0.6
LRRC28-202ENST00000331450 TANGO6Q9C0B7 1094 aa18.79■□□□□ 0.6
LRRC28-202ENST00000331450 PNMA3Q9UL41 463 aa18.79■□□□□ 0.6
LRRC28-202ENST00000331450 MGAMO43451 1857 aa18.79■□□□□ 0.6
LRRC28-202ENST00000331450 MYPNQ86TC9 1320 aa18.78■□□□□ 0.6
LRRC28-202ENST00000331450 CYP2C8P10632 490 aa18.78■□□□□ 0.6
LRRC28-202ENST00000331450 SLC1A4P43007 532 aa18.78■□□□□ 0.6
LRRC28-202ENST00000331450 ZNF543Q08ER8 600 aa18.78■□□□□ 0.6
LRRC28-202ENST00000331450 CRHR2Q13324 411 aa18.78■□□□□ 0.6
LRRC28-202ENST00000331450 TOB2Q14106 344 aaPredicted RBP18.78■□□□□ 0.6
LRRC28-202ENST00000331450 LBX2Q6XYB7 198 aa18.78■□□□□ 0.6
LRRC28-202ENST00000331450 ZNF654Q8IZM8 581 aa18.78■□□□□ 0.6
LRRC28-202ENST00000331450 MYH6P13533 1939 aa18.78■□□□□ 0.6
LRRC28-202ENST00000331450 ZSWIM8A7E2V4 1837 aa18.77■□□□□ 0.6
LRRC28-202ENST00000331450 SPDYE16A6NNV3 312 aaPredicted RBP18.77■□□□□ 0.6
LRRC28-202ENST00000331450 PLA2G6O60733 806 aa18.77■□□□□ 0.6
LRRC28-202ENST00000331450 DDAH1O94760 285 aa18.77■□□□□ 0.6
LRRC28-202ENST00000331450 OSBPP22059 807 aa18.77■□□□□ 0.6
LRRC28-202ENST00000331450 EVCP57679 992 aa18.77■□□□□ 0.6
LRRC28-202ENST00000331450 IRX3P78415 501 aaPredicted RBP18.77■□□□□ 0.6
LRRC28-202ENST00000331450 APOA5Q6Q788 366 aa18.77■□□□□ 0.6
LRRC28-202ENST00000331450 POTEEQ6S8J3 1075 aa18.77■□□□□ 0.6
LRRC28-202ENST00000331450 KCTD1Q719H9 257 aa18.77■□□□□ 0.6
LRRC28-202ENST00000331450 ALDH8A1Q9H2A2 487 aaPredicted RBP18.77■□□□□ 0.6
LRRC28-202ENST00000331450 FBXO28Q9NVF7 368 aa18.77■□□□□ 0.6
LRRC28-202ENST00000331450 BRPF3Q9ULD4 1205 aa18.77■□□□□ 0.6
LRRC28-202ENST00000331450 MTMR7Q9Y216 660 aa18.77■□□□□ 0.6
LRRC28-202ENST00000331450 NID2Q14112 1375 aa18.77■□□□□ 0.6
LRRC28-202ENST00000331450 CCDC69A6NI79 296 aa18.76■□□□□ 0.59
LRRC28-202ENST00000331450 TRPA1O75762 1119 aa18.76■□□□□ 0.59
LRRC28-202ENST00000331450 HERVK_113P62684 666 aa18.76■□□□□ 0.59
LRRC28-202ENST00000331450 COG2Q14746 738 aa18.76■□□□□ 0.59
LRRC28-202ENST00000331450 GRM4Q14833 912 aa18.76■□□□□ 0.59
LRRC28-202ENST00000331450 ASPRV1Q53RT3 343 aa18.76■□□□□ 0.59
LRRC28-202ENST00000331450 GPATCH4Q5T3I0 446 aaKnown RBP18.76■□□□□ 0.59
LRRC28-202ENST00000331450 BTNL9Q6UXG8 535 aa18.76■□□□□ 0.59
LRRC28-202ENST00000331450 NFXL1Q6ZNB6 911 aa18.76■□□□□ 0.59
LRRC28-202ENST00000331450 CATIPQ7Z7H3 387 aa18.76■□□□□ 0.59
LRRC28-202ENST00000331450 BRF1Q92994 677 aa18.76■□□□□ 0.59
LRRC28-202ENST00000331450 MAP3K14Q99558 947 aa18.76■□□□□ 0.59
LRRC28-202ENST00000331450 P2RX7Q99572 595 aaKnown RBP18.76■□□□□ 0.59
LRRC28-202ENST00000331450 R3HDMLQ9H3Y0 253 aa18.76■□□□□ 0.59
LRRC28-202ENST00000331450 ZFYVE28Q9HCC9 887 aa18.76■□□□□ 0.59
LRRC28-202ENST00000331450 PDRG1Q9NUG6 133 aa18.76■□□□□ 0.59
LRRC28-202ENST00000331450 FEM1BQ9UK73 627 aa18.76■□□□□ 0.59
LRRC28-202ENST00000331450 PPP1R9AQ9ULJ8 1098 aa18.76■□□□□ 0.59
LRRC28-202ENST00000331450 ADAMTS5Q9UNA0 930 aa18.76■□□□□ 0.59
LRRC28-202ENST00000331450 FRMPD2Q68DX3 1309 aaPredicted RBP18.75■□□□□ 0.59
LRRC28-202ENST00000331450 TLR2O60603 784 aa18.75■□□□□ 0.59
LRRC28-202ENST00000331450 FLOT1O75955 427 aa18.75■□□□□ 0.59
LRRC28-202ENST00000331450 DSG3P32926 999 aa18.75■□□□□ 0.59
LRRC28-202ENST00000331450 STAT2P52630 851 aa18.75■□□□□ 0.59
LRRC28-202ENST00000331450 CCDC96Q2M329 555 aa18.75■□□□□ 0.59
LRRC28-202ENST00000331450 CHMP4CQ96CF2 233 aa18.75■□□□□ 0.59
LRRC28-202ENST00000331450 SLF1Q9BQI6 1058 aa18.75■□□□□ 0.59
LRRC28-202ENST00000331450 MYL10Q9BUA6 226 aa18.75■□□□□ 0.59
LRRC28-202ENST00000331450 RBBP6Q7Z6E9 1792 aaKnown RBP18.74■□□□□ 0.59
LRRC28-202ENST00000331450 KLF18A0A0U1RQI7 1052 aa18.74■□□□□ 0.59
LRRC28-202ENST00000331450 PALM3A6NDB9 673 aaPredicted RBP18.74■□□□□ 0.59
LRRC28-202ENST00000331450 TMEM232C9JQI7 657 aa18.74■□□□□ 0.59
LRRC28-202ENST00000331450 BCRP11274 1271 aa18.74■□□□□ 0.59
LRRC28-202ENST00000331450 RCAN1P53805 252 aa18.74■□□□□ 0.59
LRRC28-202ENST00000331450 FGD1P98174 961 aa18.74■□□□□ 0.59
LRRC28-202ENST00000331450 APOBRQ0VD83 1088 aa18.74■□□□□ 0.59
LRRC28-202ENST00000331450 TTBK2Q6IQ55 1244 aa18.74■□□□□ 0.59
LRRC28-202ENST00000331450 FAM160B2Q86V87 743 aa18.74■□□□□ 0.59
LRRC28-202ENST00000331450 SMCR8Q8TEV9 937 aaPredicted RBP18.74■□□□□ 0.59
LRRC28-202ENST00000331450 GTF3C2Q8WUA4 911 aaPredicted RBP18.74■□□□□ 0.59
LRRC28-202ENST00000331450 ATG4CQ96DT6 458 aa18.74■□□□□ 0.59
LRRC28-202ENST00000331450 MAD2L2Q9UI95 211 aa18.74■□□□□ 0.59
LRRC28-202ENST00000331450 SLC12A7Q9Y666 1083 aa18.74■□□□□ 0.59
LRRC28-202ENST00000331450 TBC1D8O95759 1140 aa18.73■□□□□ 0.59
LRRC28-202ENST00000331450 PARP1P09874 1014 aaKnown RBP18.73■□□□□ 0.59
LRRC28-202ENST00000331450 GOLGA8HP0CJ92 632 aa18.73■□□□□ 0.59
LRRC28-202ENST00000331450 CALM1P0DP23 149 aa18.73■□□□□ 0.59
LRRC28-202ENST00000331450 CALM2P0DP24 149 aa18.73■□□□□ 0.59
LRRC28-202ENST00000331450 CALM3P0DP25 149 aa18.73■□□□□ 0.59
LRRC28-202ENST00000331450 GCLCP48506 637 aaPredicted RBP18.73■□□□□ 0.59
LRRC28-202ENST00000331450 NEK4P51957 841 aa18.73■□□□□ 0.59
LRRC28-202ENST00000331450 AK2P54819 239 aa18.73■□□□□ 0.59
LRRC28-202ENST00000331450 NOM1Q5C9Z4 860 aaKnown RBP18.73■□□□□ 0.59
LRRC28-202ENST00000331450 C17orf99Q6UX52 265 aa18.73■□□□□ 0.59
LRRC28-202ENST00000331450 STAG2Q8N3U4 1231 aa18.73■□□□□ 0.59
LRRC28-202ENST00000331450 PRPF38AQ8NAV1 312 aaKnown RBP18.73■□□□□ 0.59
LRRC28-202ENST00000331450 BEGAINQ9BUH8 593 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms