RNA–Protein interactions for RNA: ENST00000329913.3

GDF3-201, Transcript of growth differentiation factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF3, Length 1,239 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3-201ENST00000329913 CAPN2P17655 700 aa11.4□□□□□ -0.58
GDF3-201ENST00000329913 ADCYAP1R1P41586 468 aa11.4□□□□□ -0.58
GDF3-201ENST00000329913 USP14P54578 494 aa11.4□□□□□ -0.58
GDF3-201ENST00000329913 MAP3K12Q12852 859 aa11.4□□□□□ -0.58
GDF3-201ENST00000329913 FAM47AQ5JRC9 791 aa11.4□□□□□ -0.58
GDF3-201ENST00000329913 NCAPG2Q86XI2 1143 aa11.4□□□□□ -0.58
GDF3-201ENST00000329913 STK11IPQ8N1F8 1099 aa11.4□□□□□ -0.58
GDF3-201ENST00000329913 GTF3C2Q8WUA4 911 aaPredicted RBP11.4□□□□□ -0.58
GDF3-201ENST00000329913 LPAR1Q92633 364 aa11.4□□□□□ -0.58
GDF3-201ENST00000329913 ZNF512BQ96KM6 892 aaPredicted RBP11.4□□□□□ -0.58
GDF3-201ENST00000329913 EHD4Q9H223 541 aa11.4□□□□□ -0.58
GDF3-201ENST00000329913 RYDENQ9NUL5 291 aaKnown RBP11.4□□□□□ -0.58
GDF3-201ENST00000329913 DNM1LO00429 736 aa11.39□□□□□ -0.59
GDF3-201ENST00000329913 RAD21O60216 631 aa11.39□□□□□ -0.59
GDF3-201ENST00000329913 TAL1P17542 331 aaPredicted RBP11.39□□□□□ -0.59
GDF3-201ENST00000329913 ITGB8P26012 769 aa11.39□□□□□ -0.59
GDF3-201ENST00000329913 SLC9C2Q5TAH2 1124 aa11.39□□□□□ -0.59
GDF3-201ENST00000329913 GPR153Q6NV75 609 aa11.39□□□□□ -0.59
GDF3-201ENST00000329913 LBX2Q6XYB7 198 aa11.39□□□□□ -0.59
GDF3-201ENST00000329913 TTC6Q86TZ1 520 aa11.39□□□□□ -0.59
GDF3-201ENST00000329913 MYLIPQ8WY64 445 aa11.39□□□□□ -0.59
GDF3-201ENST00000329913 SPATC1LQ9H0A9 340 aa11.39□□□□□ -0.59
GDF3-201ENST00000329913 BMP2KQ9NSY1 1161 aaPredicted RBP11.39□□□□□ -0.59
GDF3-201ENST00000329913 GINM1Q9NU53 330 aa11.39□□□□□ -0.59
GDF3-201ENST00000329913 FBXO28Q9NVF7 368 aa11.39□□□□□ -0.59
GDF3-201ENST00000329913 PRKAG2Q9UGJ0 569 aa11.39□□□□□ -0.59
GDF3-201ENST00000329913 NOP58Q9Y2X3 529 aaKnown RBP11.39□□□□□ -0.59
GDF3-201ENST00000329913 A0A0G2JMZ2 1700 aa11.38□□□□□ -0.59
GDF3-201ENST00000329913 TRIM43BA6NCK2 446 aa11.38□□□□□ -0.59
GDF3-201ENST00000329913 TTLL13PA6NNM8 815 aa11.38□□□□□ -0.59
GDF3-201ENST00000329913 KBTBD13C9JR72 458 aa11.38□□□□□ -0.59
GDF3-201ENST00000329913 POTEB2H3BUK9 544 aa11.38□□□□□ -0.59
GDF3-201ENST00000329913 GTPBP6O43824 516 aaPredicted RBP11.38□□□□□ -0.59
GDF3-201ENST00000329913 GABBR2O75899 941 aa11.38□□□□□ -0.59
GDF3-201ENST00000329913 FLOT1O75955 427 aa11.38□□□□□ -0.59
GDF3-201ENST00000329913 HOXC6P09630 235 aa11.38□□□□□ -0.59
GDF3-201ENST00000329913 EPHB4P54760 987 aa11.38□□□□□ -0.59
GDF3-201ENST00000329913 GABPAQ06546 454 aa11.38□□□□□ -0.59
GDF3-201ENST00000329913 ZNF697Q5TEC3 545 aa11.38□□□□□ -0.59
GDF3-201ENST00000329913 SLC39A5Q6ZMH5 540 aa11.38□□□□□ -0.59
GDF3-201ENST00000329913 SIAH1Q8IUQ4 282 aa11.38□□□□□ -0.59
GDF3-201ENST00000329913 TRIM43Q96BQ3 446 aaPredicted RBP11.38□□□□□ -0.59
GDF3-201ENST00000329913 CDX2Q99626 313 aaPredicted RBP11.38□□□□□ -0.59
GDF3-201ENST00000329913 TTYH1Q9H313 450 aaPredicted RBP11.38□□□□□ -0.59
GDF3-201ENST00000329913 PDLIM7Q9NR12 457 aa11.38□□□□□ -0.59
GDF3-201ENST00000329913 RLFQ13129 1914 aa11.38□□□□□ -0.59
GDF3-201ENST00000329913 MBD4O95243 580 aa11.37□□□□□ -0.59
GDF3-201ENST00000329913 PGK1P00558 417 aa11.37□□□□□ -0.59
GDF3-201ENST00000329913 IGHA2P01877 340 aa11.37□□□□□ -0.59
GDF3-201ENST00000329913 SLC4A3P48751 1232 aa11.37□□□□□ -0.59
GDF3-201ENST00000329913 IRX5P78411 483 aaPredicted RBP11.37□□□□□ -0.59
GDF3-201ENST00000329913 HNRNPUQ00839 825 aaKnown RBP eCLIP11.37□□□□□ -0.59
GDF3-201ENST00000329913 LRRC41Q15345 812 aa11.37□□□□□ -0.59
GDF3-201ENST00000329913 CHMP4CQ96CF2 233 aa11.37□□□□□ -0.59
GDF3-201ENST00000329913 CRNKL1Q9BZJ0 848 aaKnown RBP11.37□□□□□ -0.59
GDF3-201ENST00000329913 DCP1AQ9NPI6 582 aaPredicted RBP11.37□□□□□ -0.59
GDF3-201ENST00000329913 TCRBV5S4A2TA0A5A2 114 aa11.36□□□□□ -0.59
GDF3-201ENST00000329913 PQBP1O60828 265 aaKnown RBP11.36□□□□□ -0.59
GDF3-201ENST00000329913 TLE2Q04725 743 aa11.36□□□□□ -0.59
GDF3-201ENST00000329913 ICA1Q05084 483 aa11.36□□□□□ -0.59
GDF3-201ENST00000329913 COG2Q14746 738 aa11.36□□□□□ -0.59
GDF3-201ENST00000329913 TMEM132BQ14DG7 1078 aa11.36□□□□□ -0.59
GDF3-201ENST00000329913 MAFAQ8NHW3 353 aaPredicted RBP11.36□□□□□ -0.59
GDF3-201ENST00000329913 RHPN1Q8TCX5 695 aa11.36□□□□□ -0.59
GDF3-201ENST00000329913 MAML3Q96JK9 1138 aa11.36□□□□□ -0.59
GDF3-201ENST00000329913 NUP88Q99567 741 aaPredicted RBP11.36□□□□□ -0.59
GDF3-201ENST00000329913 TTC28Q96AY4 2481 aa11.36□□□□□ -0.59
GDF3-201ENST00000329913 BAZ2AQ9UIF9 1905 aaKnown RBP11.35□□□□□ -0.59
GDF3-201ENST00000329913 SEPT4O43236 478 aa11.35□□□□□ -0.59
GDF3-201ENST00000329913 OLFML2BQ68BL8 750 aa11.35□□□□□ -0.59
GDF3-201ENST00000329913 EFCAB3Q8N7B9 438 aa11.35□□□□□ -0.59
GDF3-201ENST00000329913 ARRDC4Q8NCT1 418 aa11.35□□□□□ -0.59
GDF3-201ENST00000329913 BOLA2Q9H3K6 86 aa11.35□□□□□ -0.59
GDF3-201ENST00000329913 SEMA6BQ9H3T3 888 aa11.35□□□□□ -0.59
GDF3-201ENST00000329913 CHD9Q3L8U1 2897 aa11.35□□□□□ -0.59
GDF3-201ENST00000329913 MUC3AQ02505 3323 aa11.35□□□□□ -0.59
GDF3-201ENST00000329913 COL11A1P12107 1806 aaPredicted RBP11.35□□□□□ -0.59
GDF3-201ENST00000329913 ZNF236Q9UL36 1845 aa11.35□□□□□ -0.59
GDF3-201ENST00000329913 MYADML2A6NDP7 307 aa11.34□□□□□ -0.59
GDF3-201ENST00000329913 MSCO60682 206 aa11.34□□□□□ -0.59
GDF3-201ENST00000329913 EEF2P13639 858 aaKnown RBP11.34□□□□□ -0.59
GDF3-201ENST00000329913 FAM83BQ5T0W9 1011 aa11.34□□□□□ -0.59
GDF3-201ENST00000329913 FAM109BQ6ICB4 259 aaPredicted RBP11.34□□□□□ -0.59
GDF3-201ENST00000329913 TMEM179Q6ZVK1 233 aa11.34□□□□□ -0.59
GDF3-201ENST00000329913 USP38Q8NB14 1042 aa11.34□□□□□ -0.59
GDF3-201ENST00000329913 MMP19Q99542 508 aa11.34□□□□□ -0.59
GDF3-201ENST00000329913 MFRPQ9BY79 579 aa11.34□□□□□ -0.59
GDF3-201ENST00000329913 VCPKMTQ9H867 229 aa11.34□□□□□ -0.59
GDF3-201ENST00000329913 XPNPEP3Q9NQH7 507 aa11.34□□□□□ -0.59
GDF3-201ENST00000329913 DDX49Q9Y6V7 483 aaKnown RBP11.34□□□□□ -0.59
GDF3-201ENST00000329913 A0A1W2PQ45 241 aaPredicted RBP11.33□□□□□ -0.6
GDF3-201ENST00000329913 A0A1W2PQY0 241 aa11.33□□□□□ -0.6
GDF3-201ENST00000329913 USP17L12C9JPN9 530 aa11.33□□□□□ -0.6
GDF3-201ENST00000329913 USP17L21D6R901 530 aa11.33□□□□□ -0.6
GDF3-201ENST00000329913 RBAK-RBAKDNI3L0D1 243 aa11.33□□□□□ -0.6
GDF3-201ENST00000329913 SMARCA5O60264 1052 aaPredicted RBP11.33□□□□□ -0.6
GDF3-201ENST00000329913 IFIT2P09913 472 aaKnown RBP11.33□□□□□ -0.6
GDF3-201ENST00000329913 FOSL2P15408 326 aa11.33□□□□□ -0.6
GDF3-201ENST00000329913 PTGS1P23219 599 aa11.33□□□□□ -0.6
GDF3-201ENST00000329913 CDK8P49336 464 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms