RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 COL4A1P02462 1669 aa15.89■□□□□ 0.13
ATP2C1-201ENST00000328560 PP2D1A8MPX8 630 aa15.89■□□□□ 0.13
ATP2C1-201ENST00000328560 STAT6P42226 847 aa15.89■□□□□ 0.13
ATP2C1-201ENST00000328560 IL17AQ16552 155 aa15.89■□□□□ 0.13
ATP2C1-201ENST00000328560 FBXO33Q7Z6M2 555 aa15.89■□□□□ 0.13
ATP2C1-201ENST00000328560 ACRBPQ8NEB7 543 aa15.89■□□□□ 0.13
ATP2C1-201ENST00000328560 ECM29Q5VYK3 1845 aa15.89■□□□□ 0.13
ATP2C1-201ENST00000328560 USP17L3A6NCW0 530 aa15.89■□□□□ 0.13
ATP2C1-201ENST00000328560 USP17L4A6NCW7 530 aa15.89■□□□□ 0.13
ATP2C1-201ENST00000328560 KIF5CO60282 957 aa15.89■□□□□ 0.13
ATP2C1-201ENST00000328560 KIF5BP33176 963 aa15.89■□□□□ 0.13
ATP2C1-201ENST00000328560 KRT31Q15323 416 aa15.89■□□□□ 0.13
ATP2C1-201ENST00000328560 TERF2Q15554 542 aa15.89■□□□□ 0.13
ATP2C1-201ENST00000328560 KIF4BQ2VIQ3 1234 aa15.89■□□□□ 0.13
ATP2C1-201ENST00000328560 USP17L1Q7RTZ2 530 aa15.89■□□□□ 0.13
ATP2C1-201ENST00000328560 HEATR3Q7Z4Q2 680 aa15.89■□□□□ 0.13
ATP2C1-201ENST00000328560 NELFBQ8WX92 580 aa15.89■□□□□ 0.13
ATP2C1-201ENST00000328560 TNFRSF25Q93038 417 aa15.89■□□□□ 0.13
ATP2C1-201ENST00000328560 CTAGE1Q96RT6 745 aa15.89■□□□□ 0.13
ATP2C1-201ENST00000328560 CPVLQ9H3G5 476 aa15.89■□□□□ 0.13
ATP2C1-201ENST00000328560 FHOD1Q9Y613 1164 aa15.89■□□□□ 0.13
ATP2C1-201ENST00000328560 BAZ2AQ9UIF9 1905 aaKnown RBP15.89■□□□□ 0.13
ATP2C1-201ENST00000328560 CCDC194A0A1B0GVG4 234 aa15.88■□□□□ 0.13
ATP2C1-201ENST00000328560 TXLNAP40222 546 aa15.88■□□□□ 0.13
ATP2C1-201ENST00000328560 APTXQ7Z2E3 356 aaKnown RBP15.88■□□□□ 0.13
ATP2C1-201ENST00000328560 AMOTL1Q8IY63 956 aa15.88■□□□□ 0.13
ATP2C1-201ENST00000328560 SLC44A5Q8NCS7 719 aa15.88■□□□□ 0.13
ATP2C1-201ENST00000328560 GPR101Q96P66 508 aaPredicted RBP15.88■□□□□ 0.13
ATP2C1-201ENST00000328560 ANKRD2Q9GZV1 360 aa15.88■□□□□ 0.13
ATP2C1-201ENST00000328560 ADGRG1Q9Y653 693 aa15.88■□□□□ 0.13
ATP2C1-201ENST00000328560 CHD4Q14839 1912 aa15.88■□□□□ 0.13
ATP2C1-201ENST00000328560 GOLGA8HP0CJ92 632 aa15.88■□□□□ 0.13
ATP2C1-201ENST00000328560 MAP3K9P80192 1104 aa15.88■□□□□ 0.13
ATP2C1-201ENST00000328560 DIXDC1Q155Q3 683 aa15.88■□□□□ 0.13
ATP2C1-201ENST00000328560 BLIDQ8IZY5 108 aa15.88■□□□□ 0.13
ATP2C1-201ENST00000328560 PNMA1Q8ND90 353 aa15.88■□□□□ 0.13
ATP2C1-201ENST00000328560 ANKRD20A12PQ8NF67 263 aa15.88■□□□□ 0.13
ATP2C1-201ENST00000328560 MTRQ99707 1265 aa15.88■□□□□ 0.13
ATP2C1-201ENST00000328560 SAP30BPQ9UHR5 308 aaKnown RBP15.88■□□□□ 0.13
ATP2C1-201ENST00000328560 CCNL1Q9UK58 526 aaPredicted RBP15.88■□□□□ 0.13
ATP2C1-201ENST00000328560 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.88■□□□□ 0.13
ATP2C1-201ENST00000328560 PAK1Q13153 545 aa15.88■□□□□ 0.13
ATP2C1-201ENST00000328560 PFKFB3Q16875 520 aaPredicted RBP15.88■□□□□ 0.13
ATP2C1-201ENST00000328560 FAM182BQ5T319 152 aa15.88■□□□□ 0.13
ATP2C1-201ENST00000328560 NHSL1Q5SYE7 1610 aa15.87■□□□□ 0.13
ATP2C1-201ENST00000328560 TAF1P21675 1872 aa15.87■□□□□ 0.13
ATP2C1-201ENST00000328560 MFAP3LO75121 409 aa15.87■□□□□ 0.13
ATP2C1-201ENST00000328560 RFC4P35249 363 aa15.87■□□□□ 0.13
ATP2C1-201ENST00000328560 PANX2Q96RD6 677 aa15.87■□□□□ 0.13
ATP2C1-201ENST00000328560 MRFAP1Q9Y605 127 aa15.87■□□□□ 0.13
ATP2C1-201ENST00000328560 LRP5O75197 1615 aa15.87■□□□□ 0.13
ATP2C1-201ENST00000328560 FAM205AQ6ZU69 1335 aa15.87■□□□□ 0.13
ATP2C1-201ENST00000328560 TRIM49BA6NDI0 452 aa15.87■□□□□ 0.13
ATP2C1-201ENST00000328560 TFRCP02786 760 aaKnown RBP15.87■□□□□ 0.13
ATP2C1-201ENST00000328560 GYPCP04921 128 aa15.87■□□□□ 0.13
ATP2C1-201ENST00000328560 CDKAL1Q5VV42 579 aa15.87■□□□□ 0.13
ATP2C1-201ENST00000328560 ATP8A2Q9NTI2 1148 aa15.87■□□□□ 0.13
ATP2C1-201ENST00000328560 ORC4O43929 436 aa15.87■□□□□ 0.13
ATP2C1-201ENST00000328560 KIF20AO95235 890 aa15.87■□□□□ 0.13
ATP2C1-201ENST00000328560 INF2Q27J81 1249 aa15.87■□□□□ 0.13
ATP2C1-201ENST00000328560 ARPP21Q9UBL0 812 aaPredicted RBP15.87■□□□□ 0.13
ATP2C1-201ENST00000328560 RPN1P04843 607 aaKnown RBP15.86■□□□□ 0.13
ATP2C1-201ENST00000328560 UBXN1Q04323 297 aa15.86■□□□□ 0.13
ATP2C1-201ENST00000328560 KIFC2Q96AC6 838 aa15.86■□□□□ 0.13
ATP2C1-201ENST00000328560 VAT1LQ9HCJ6 419 aa15.86■□□□□ 0.13
ATP2C1-201ENST00000328560 KCNJ18B7U540 433 aa15.86■□□□□ 0.13
ATP2C1-201ENST00000328560 GTPBP6O43824 516 aaPredicted RBP15.86■□□□□ 0.13
ATP2C1-201ENST00000328560 ABL1P00519 1130 aa15.86■□□□□ 0.13
ATP2C1-201ENST00000328560 TSPY3P0CV98 308 aa15.86■□□□□ 0.13
ATP2C1-201ENST00000328560 TSPY8P0CW00 308 aa15.86■□□□□ 0.13
ATP2C1-201ENST00000328560 KCNJ12Q14500 433 aa15.86■□□□□ 0.13
ATP2C1-201ENST00000328560 RCSD1Q6JBY9 416 aa15.86■□□□□ 0.13
ATP2C1-201ENST00000328560 SLF1Q9BQI6 1058 aa15.86■□□□□ 0.13
ATP2C1-201ENST00000328560 UBAP1LF5GYI3 381 aa15.85■□□□□ 0.13
ATP2C1-201ENST00000328560 PCP11498 1178 aaKnown RBP15.85■□□□□ 0.13
ATP2C1-201ENST00000328560 KRT9P35527 623 aa15.85■□□□□ 0.13
ATP2C1-201ENST00000328560 UBA7P41226 1012 aa15.85■□□□□ 0.13
ATP2C1-201ENST00000328560 PRCPP42785 496 aa15.85■□□□□ 0.13
ATP2C1-201ENST00000328560 COPB1P53618 953 aaKnown RBP15.85■□□□□ 0.13
ATP2C1-201ENST00000328560 E2F4Q16254 413 aa15.85■□□□□ 0.13
ATP2C1-201ENST00000328560 RASGRP2Q7LDG7 609 aa15.85■□□□□ 0.13
ATP2C1-201ENST00000328560 CNGA4Q8IV77 575 aa15.85■□□□□ 0.13
ATP2C1-201ENST00000328560 ZNF444Q8N0Y2 327 aaPredicted RBP15.85■□□□□ 0.13
ATP2C1-201ENST00000328560 TGFBRAP1Q8WUH2 860 aa15.85■□□□□ 0.13
ATP2C1-201ENST00000328560 PARD6BQ9BYG5 372 aa15.85■□□□□ 0.13
ATP2C1-201ENST00000328560 TIAM2Q8IVF5 1701 aa15.85■□□□□ 0.13
ATP2C1-201ENST00000328560 MYH14Q7Z406 1995 aaKnown RBP15.85■□□□□ 0.13
ATP2C1-201ENST00000328560 RNF225M0QZC1 329 aaPredicted RBP15.85■□□□□ 0.13
ATP2C1-201ENST00000328560 CALML3P27482 149 aa15.85■□□□□ 0.13
ATP2C1-201ENST00000328560 PLA2G4AP47712 749 aa15.85■□□□□ 0.13
ATP2C1-201ENST00000328560 TYW1BQ6NUM6 668 aa15.85■□□□□ 0.13
ATP2C1-201ENST00000328560 PDXDC2PQ6P474 469 aa15.85■□□□□ 0.13
ATP2C1-201ENST00000328560 DTHD1Q6ZMT9 781 aa15.85■□□□□ 0.13
ATP2C1-201ENST00000328560 SH3RF3Q8TEJ3 882 aaPredicted RBP15.85■□□□□ 0.13
ATP2C1-201ENST00000328560 NARFQ9UHQ1 456 aa15.85■□□□□ 0.13
ATP2C1-201ENST00000328560 SPTY2D1Q68D10 685 aaPredicted RBP15.85■□□□□ 0.13
ATP2C1-201ENST00000328560 MAPKAPK5Q8IW41 473 aa15.85■□□□□ 0.13
ATP2C1-201ENST00000328560 GOLGA1Q92805 767 aa15.85■□□□□ 0.13
ATP2C1-201ENST00000328560 CICQ96RK0 1608 aaPredicted RBP15.84■□□□□ 0.13
ATP2C1-201ENST00000328560 LDHBP07195 334 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms