RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 SLC22A31A6NKX4 558 aa2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 SCAMP3O14828 347 aaKnown RBP2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 RECKO95980 971 aa2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 TPP2P29144 1249 aaPredicted RBP2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 AFMP43652 599 aa2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 SLITRK4Q8IW52 837 aa2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 ALPK1Q96QP1 1244 aa2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 ASCC2Q9H1I8 757 aaPredicted RBP2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 SYNMO15061 1565 aa2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 PTPRKQ15262 1439 aa2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 TEX14Q8IWB6 1497 aa2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 RAD51AP2Q09MP3 1159 aa2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 CREG2Q8IUH2 290 aa2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 DUSP15Q9H1R2 295 aaPredicted RBP2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 DUSP13Q9UII6 198 aa2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 CTNND2Q9UQB3 1225 aa2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 RNF17Q9BXT8 1623 aaKnown RBP2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 IMPDH2P12268 514 aa2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 RAC2P15153 192 aa2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 LTKP29376 864 aa2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 GDNFP39905 211 aa2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 CCNFP41002 786 aa2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 CLEC16AQ2KHT3 1053 aa2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 CDCP2Q5VXM1 449 aa2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 NLRC3Q7RTR2 1065 aa2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 TSPYL5Q86VY4 417 aaPredicted RBP2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 ZSWIM9Q86XI8 627 aa2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 TMEM40Q8WWA1 233 aa2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 SYTL4Q96C24 671 aaPredicted RBP2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 EAF1Q96JC9 268 aaPredicted RBP2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 CNNM2Q9H8M5 875 aa2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 SLAMF8Q9P0V8 285 aa2.72□□□□□ -1.97
CCDC144A-201ENST00000328495 MEIS3P2A8K0S8 358 aa2.71□□□□□ -1.98
CCDC144A-201ENST00000328495 ESR1P03372 595 aa2.71□□□□□ -1.98
CCDC144A-201ENST00000328495 SRFP11831 508 aa2.71□□□□□ -1.98
CCDC144A-201ENST00000328495 CLCQ05315 142 aa2.71□□□□□ -1.98
CCDC144A-201ENST00000328495 KCNMB1Q16558 191 aa2.71□□□□□ -1.98
CCDC144A-201ENST00000328495 GAB4Q2WGN9 574 aa2.71□□□□□ -1.98
CCDC144A-201ENST00000328495 ZNF394Q53GI3 561 aa2.71□□□□□ -1.98
CCDC144A-201ENST00000328495 PCDHGB7Q9Y5F8 929 aa2.71□□□□□ -1.98
CCDC144A-201ENST00000328495 MADDQ8WXG6 1647 aa2.71□□□□□ -1.98
CCDC144A-201ENST00000328495 CLEC3AO75596 197 aa2.71□□□□□ -1.98
CCDC144A-201ENST00000328495 UBOX5O94941 541 aa2.71□□□□□ -1.98
CCDC144A-201ENST00000328495 EGR3Q06889 387 aa2.71□□□□□ -1.98
CCDC144A-201ENST00000328495 ATG4CQ96DT6 458 aa2.71□□□□□ -1.98
CCDC144A-201ENST00000328495 GOLGA2P5Q9HBQ8 144 aa2.71□□□□□ -1.98
CCDC144A-201ENST00000328495 TMEM59LQ9UK28 342 aa2.71□□□□□ -1.98
CCDC144A-201ENST00000328495 KIF21BO75037 1637 aa2.71□□□□□ -1.98
CCDC144A-201ENST00000328495 LRRN2O75325 713 aa2.7□□□□□ -1.98
CCDC144A-201ENST00000328495 HSPA6P17066 643 aa2.7□□□□□ -1.98
CCDC144A-201ENST00000328495 OGFOD2Q6N063 350 aa2.7□□□□□ -1.98
CCDC144A-201ENST00000328495 ZNF654Q8IZM8 581 aa2.7□□□□□ -1.98
CCDC144A-201ENST00000328495 MRRFQ96E11 262 aaKnown RBP2.7□□□□□ -1.98
CCDC144A-201ENST00000328495 KIRREL1Q96J84 757 aa2.7□□□□□ -1.98
CCDC144A-201ENST00000328495 FERD3LQ96RJ6 166 aa2.7□□□□□ -1.98
CCDC144A-201ENST00000328495 FAM53CQ9NYF3 392 aa2.7□□□□□ -1.98
CCDC144A-201ENST00000328495 ZNRF3Q9ULT6 936 aa2.7□□□□□ -1.98
CCDC144A-201ENST00000328495 CARMIL2Q6F5E8 1435 aa2.7□□□□□ -1.98
CCDC144A-201ENST00000328495 TNFRSF10CO14798 259 aa2.7□□□□□ -1.98
CCDC144A-201ENST00000328495 NME1P15531 152 aaKnown RBP2.7□□□□□ -1.98
CCDC144A-201ENST00000328495 POLR2BP30876 1174 aaKnown RBP2.7□□□□□ -1.98
CCDC144A-201ENST00000328495 NMIQ13287 307 aaPredicted RBP2.7□□□□□ -1.98
CCDC144A-201ENST00000328495 TTC6Q86TZ1 520 aa2.7□□□□□ -1.98
CCDC144A-201ENST00000328495 ENOX1Q8TC92 643 aaKnown RBP2.7□□□□□ -1.98
CCDC144A-201ENST00000328495 DHX38Q92620 1227 aaKnown RBP2.7□□□□□ -1.98
CCDC144A-201ENST00000328495 SPATA32Q96LK8 384 aa2.7□□□□□ -1.98
CCDC144A-201ENST00000328495 DDX41Q9UJV9 622 aaKnown RBP2.7□□□□□ -1.98
CCDC144A-201ENST00000328495 CCDC9Q9Y3X0 531 aaKnown RBP2.7□□□□□ -1.98
CCDC144A-201ENST00000328495 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.7□□□□□ -1.98
CCDC144A-201ENST00000328495 POU5F2Q8N7G0 328 aa2.7□□□□□ -1.98
CCDC144A-201ENST00000328495 VWCEQ96DN2 955 aa2.7□□□□□ -1.98
CCDC144A-201ENST00000328495 KRTAP9-2Q9BYQ4 174 aa2.7□□□□□ -1.98
CCDC144A-201ENST00000328495 C19orf73Q9NVV2 129 aa2.7□□□□□ -1.98
CCDC144A-201ENST00000328495 PCDHA11Q9Y5I1 949 aa2.7□□□□□ -1.98
CCDC144A-201ENST00000328495 AHDC1Q5TGY3 1603 aaPredicted RBP2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 DNAJC25-GNG10A0A024R161 153 aa2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 WASH4PA8MWX3 477 aa2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 GLI1P08151 1106 aa2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 COL9A2Q14055 689 aaPredicted RBP2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 TMEM67Q5HYA8 995 aa2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 NBPF12Q5TAG4 269 aaPredicted RBP2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 SYTL5Q8TDW5 730 aaPredicted RBP2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 MKRN2Q9H000 416 aaKnown RBP2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 SHISA3A0PJX4 238 aa2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 FARP2O94887 1054 aaPredicted RBP2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 YBX3P16989 372 aaKnown RBP eCLIP2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 HK2P52789 917 aa2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 RACK1P63244 317 aaKnown RBP2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 DUSP4Q13115 394 aa2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 NBPF9Q3BBW0 867 aa2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 RALGPS1Q5JS13 557 aa2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 FBXW10Q5XX13 1052 aa2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 OXR1Q8N573 874 aa2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 DHRS1Q96LJ7 313 aa2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 ANTXR1Q9H6X2 564 aa2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 LRRC10BA6NIK2 292 aa2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 INTS3Q68E01 1043 aaKnown RBP2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 MPZL3Q6UWV2 235 aa2.69□□□□□ -1.98
CCDC144A-201ENST00000328495 METTL16Q86W50 562 aaKnown RBP2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms