RNA–Protein interactions for RNA: ENST00000323871.9

PXN-203, Transcript of paxillin, humanhuman

TSL 2

Gene PXN, Length 5,457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-203ENST00000323871 SMC1BQ8NDV3 1235 aa19.7■□□□□ 0.74
PXN-203ENST00000323871 METP08581 1390 aa19.7■□□□□ 0.74
PXN-203ENST00000323871 KLRF2D3W0D1 207 aa19.7■□□□□ 0.74
PXN-203ENST00000323871 PRR16Q569H4 304 aa19.7■□□□□ 0.74
PXN-203ENST00000323871 DALRD3Q5D0E6 543 aaKnown RBP19.7■□□□□ 0.74
PXN-203ENST00000323871 TBC1D31Q96DN5 1066 aa19.7■□□□□ 0.74
PXN-203ENST00000323871 NKIRAS1Q9NYS0 192 aa19.7■□□□□ 0.74
PXN-203ENST00000323871 TERF1P54274 439 aa19.7■□□□□ 0.74
PXN-203ENST00000323871 SFMBT2Q5VUG0 894 aa19.7■□□□□ 0.74
PXN-203ENST00000323871 PPP1R21Q6ZMI0 780 aa19.7■□□□□ 0.74
PXN-203ENST00000323871 SRGAP1Q7Z6B7 1085 aa19.7■□□□□ 0.74
PXN-203ENST00000323871 DPP9Q86TI2 863 aa19.7■□□□□ 0.74
PXN-203ENST00000323871 TMTC1Q8IUR5 882 aa19.7■□□□□ 0.74
PXN-203ENST00000323871 FANCBQ8NB91 859 aa19.7■□□□□ 0.74
PXN-203ENST00000323871 COPRSQ9NQ92 184 aa19.7■□□□□ 0.74
PXN-203ENST00000323871 ADD3Q9UEY8 706 aaKnown RBP19.7■□□□□ 0.74
PXN-203ENST00000323871 RABGAP1Q9Y3P9 1069 aa19.7■□□□□ 0.74
PXN-203ENST00000323871 TMEM232C9JQI7 657 aa19.7■□□□□ 0.74
PXN-203ENST00000323871 PSMC4P43686 418 aa19.7■□□□□ 0.74
PXN-203ENST00000323871 USP44Q9H0E7 712 aa19.7■□□□□ 0.74
PXN-203ENST00000323871 PLA2G4DQ86XP0 818 aa19.69■□□□□ 0.74
PXN-203ENST00000323871 NAPGQ99747 312 aaPredicted RBP19.69■□□□□ 0.74
PXN-203ENST00000323871 AP5M1Q9H0R1 490 aa19.69■□□□□ 0.74
PXN-203ENST00000323871 GREM2Q9H772 168 aa19.69■□□□□ 0.74
PXN-203ENST00000323871 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.69■□□□□ 0.74
PXN-203ENST00000323871 UTP11Q9Y3A2 253 aaKnown RBP19.69■□□□□ 0.74
PXN-203ENST00000323871 V9GYY5 206 aaPredicted RBP19.69■□□□□ 0.74
PXN-203ENST00000323871 TNKSO95271 1327 aa19.69■□□□□ 0.74
PXN-203ENST00000323871 GOLGA6CA6NDK9 693 aa19.69■□□□□ 0.74
PXN-203ENST00000323871 GOLGA6BA6NDN3 693 aa19.69■□□□□ 0.74
PXN-203ENST00000323871 GOLGA6DP0CG33 693 aa19.69■□□□□ 0.74
PXN-203ENST00000323871 SCG2P13521 617 aa19.69■□□□□ 0.74
PXN-203ENST00000323871 ITIH3Q06033 890 aa19.69■□□□□ 0.74
PXN-203ENST00000323871 CCDC6Q16204 474 aa19.69■□□□□ 0.74
PXN-203ENST00000323871 LRRC47Q8N1G4 583 aaKnown RBP19.69■□□□□ 0.74
PXN-203ENST00000323871 MED10Q9BTT4 135 aa19.69■□□□□ 0.74
PXN-203ENST00000323871 GOLGA6AQ9NYA3 693 aa19.69■□□□□ 0.74
PXN-203ENST00000323871 TBC1D7Q9P0N9 293 aa19.69■□□□□ 0.74
PXN-203ENST00000323871 ZKSCAN5Q9Y2L8 839 aa19.69■□□□□ 0.74
PXN-203ENST00000323871 XPOTO43592 962 aaKnown RBP19.69■□□□□ 0.74
PXN-203ENST00000323871 NELFCDQ8IXH7 590 aa19.69■□□□□ 0.74
PXN-203ENST00000323871 GTF3C6Q969F1 213 aa19.69■□□□□ 0.74
PXN-203ENST00000323871 NDUFB9Q9Y6M9 179 aa19.69■□□□□ 0.74
PXN-203ENST00000323871 HECW2Q9P2P5 1572 aa19.69■□□□□ 0.74
PXN-203ENST00000323871 IGSF1Q8N6C5 1336 aa19.69■□□□□ 0.74
PXN-203ENST00000323871 USP6P35125 1406 aa19.69■□□□□ 0.74
PXN-203ENST00000323871 hCG_1984214I3L0E3 225 aa19.69■□□□□ 0.74
PXN-203ENST00000323871 NPR1P16066 1061 aa19.69■□□□□ 0.74
PXN-203ENST00000323871 ZNF713Q8N859 430 aaPredicted RBP19.69■□□□□ 0.74
PXN-203ENST00000323871 GSDMBQ8TAX9 411 aa19.69■□□□□ 0.74
PXN-203ENST00000323871 ATRIPQ8WXE1 791 aa19.69■□□□□ 0.74
PXN-203ENST00000323871 SECISBP2LQ93073 1101 aaKnown RBP19.69■□□□□ 0.74
PXN-203ENST00000323871 DHX36Q9H2U1 1008 aaKnown RBP19.69■□□□□ 0.74
PXN-203ENST00000323871 KCNK9Q9NPC2 374 aa19.69■□□□□ 0.74
PXN-203ENST00000323871 DDX25Q9UHL0 483 aaKnown RBP19.69■□□□□ 0.74
PXN-203ENST00000323871 ERCC6LQ2NKX8 1250 aa19.68■□□□□ 0.74
PXN-203ENST00000323871 ATG3Q9NT62 314 aa19.68■□□□□ 0.74
PXN-203ENST00000323871 ASAP1Q9ULH1 1129 aa19.68■□□□□ 0.74
PXN-203ENST00000323871 PCDHA12Q9UN75 941 aa19.68■□□□□ 0.74
PXN-203ENST00000323871 SAMD9LQ8IVG5 1584 aa19.68■□□□□ 0.74
PXN-203ENST00000323871 OR52Z1P0C646 297 aa19.68■□□□□ 0.74
PXN-203ENST00000323871 FANCCQ00597 558 aa19.68■□□□□ 0.74
PXN-203ENST00000323871 AMNQ9BXJ7 453 aa19.68■□□□□ 0.74
PXN-203ENST00000323871 IMPACTQ9P2X3 320 aa19.68■□□□□ 0.74
PXN-203ENST00000323871 GCC2Q8IWJ2 1684 aa19.68■□□□□ 0.74
PXN-203ENST00000323871 KLHL30Q0D2K2 578 aa19.68■□□□□ 0.74
PXN-203ENST00000323871 SND1Q7KZF4 910 aaKnown RBP eCLIP19.68■□□□□ 0.745e-9■□□□□ 8.6
PXN-203ENST00000323871 ABCA8O94911 1581 aa19.68■□□□□ 0.74
PXN-203ENST00000323871 CDC37L1Q7L3B6 337 aa19.68■□□□□ 0.74
PXN-203ENST00000323871 MYOCDQ8IZQ8 938 aa19.68■□□□□ 0.74
PXN-203ENST00000323871 FAM184BQ9ULE4 1060 aa19.68■□□□□ 0.74
PXN-203ENST00000323871 DMP1Q13316 513 aaPredicted RBP19.67■□□□□ 0.74
PXN-203ENST00000323871 MCM6Q14566 821 aa19.67■□□□□ 0.74
PXN-203ENST00000323871 SETDB1Q15047 1291 aa19.67■□□□□ 0.74
PXN-203ENST00000323871 PPP2R5AQ15172 486 aa19.67■□□□□ 0.74
PXN-203ENST00000323871 CSRNP1Q96S65 589 aa19.67■□□□□ 0.74
PXN-203ENST00000323871 MAPK8IP1Q9UQF2 711 aa19.67■□□□□ 0.74
PXN-203ENST00000323871 GIPC1O14908 333 aa19.67■□□□□ 0.74
PXN-203ENST00000323871 CCDC110Q8TBZ0 833 aa19.67■□□□□ 0.74
PXN-203ENST00000323871 ERVK-7P63135 1459 aa19.67■□□□□ 0.74
PXN-203ENST00000323871 IREB2P48200 963 aaKnown RBP19.67■□□□□ 0.74
PXN-203ENST00000323871 LGSNQ5TDP6 509 aa19.67■□□□□ 0.74
PXN-203ENST00000323871 SDR42E1Q8WUS8 393 aa19.67■□□□□ 0.74
PXN-203ENST00000323871 ABCD1P33897 745 aa19.67■□□□□ 0.74
PXN-203ENST00000323871 NOSTRINQ8IVI9 506 aa19.67■□□□□ 0.74
PXN-203ENST00000323871 UBLCP1Q8WVY7 318 aaPredicted RBP19.67■□□□□ 0.74
PXN-203ENST00000323871 COL4A3BPQ9Y5P4 624 aa19.66■□□□□ 0.74
PXN-203ENST00000323871 NT5C2P49902 561 aa19.66■□□□□ 0.74
PXN-203ENST00000323871 LRRC24Q50LG9 513 aa19.66■□□□□ 0.74
PXN-203ENST00000323871 MAGEF1Q9HAY2 307 aa19.66■□□□□ 0.74
PXN-203ENST00000323871 ZBTB1Q9Y2K1 713 aa19.66■□□□□ 0.74
PXN-203ENST00000323871 HSPD1P10809 573 aaKnown RBP19.66■□□□□ 0.74
PXN-203ENST00000323871 POLGP54098 1239 aaPredicted RBP19.66■□□□□ 0.74
PXN-203ENST00000323871 SEPT12Q8IYM1 358 aa19.66■□□□□ 0.74
PXN-203ENST00000323871 PDZD4Q76G19 769 aaPredicted RBP19.66■□□□□ 0.74
PXN-203ENST00000323871 TLDC2A0PJX2 215 aa19.65■□□□□ 0.74
PXN-203ENST00000323871 K7ENM7 598 aa19.65■□□□□ 0.74
PXN-203ENST00000323871 TTLL1O95922 423 aa19.65■□□□□ 0.74
PXN-203ENST00000323871 XRCC5P13010 732 aaKnown RBP19.65■□□□□ 0.74
PXN-203ENST00000323871 GEN1Q17RS7 908 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms