RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 PDXDC2PQ6P474 469 aa25.36■■□□□ 1.65
PNKP-201ENST00000322344 REXO1L1PQ8IX06 675 aa25.36■■□□□ 1.65
PNKP-201ENST00000322344 TC2NQ8N9U0 490 aa25.36■■□□□ 1.65
PNKP-201ENST00000322344 FEZ1Q99689 392 aa25.36■■□□□ 1.65
PNKP-201ENST00000322344 ARID3AQ99856 593 aa25.36■■□□□ 1.65
PNKP-201ENST00000322344 MAD2L2Q9UI95 211 aa25.36■■□□□ 1.65
PNKP-201ENST00000322344 PPP1R3GB7ZBB8 358 aa25.36■■□□□ 1.65
PNKP-201ENST00000322344 CD44P16070 742 aaKnown RBP25.36■■□□□ 1.65
PNKP-201ENST00000322344 ATP2B4P23634 1241 aa25.36■■□□□ 1.65
PNKP-201ENST00000322344 FAM196AQ6ZSG2 479 aa25.36■■□□□ 1.65
PNKP-201ENST00000322344 TGFBRAP1Q8WUH2 860 aa25.36■■□□□ 1.65
PNKP-201ENST00000322344 RPGRQ92834 1020 aaKnown RBP25.36■■□□□ 1.65
PNKP-201ENST00000322344 NAV1Q8NEY1 1877 aa25.35■■□□□ 1.65
PNKP-201ENST00000322344 VEGFAP15692 232 aaPredicted RBP25.35■■□□□ 1.65
PNKP-201ENST00000322344 DIXDC1Q155Q3 683 aa25.35■■□□□ 1.65
PNKP-201ENST00000322344 CCDC93Q567U6 631 aa25.35■■□□□ 1.65
PNKP-201ENST00000322344 C4orf32Q8N8J7 132 aa25.35■■□□□ 1.65
PNKP-201ENST00000322344 CERKQ8TCT0 537 aa25.35■■□□□ 1.65
PNKP-201ENST00000322344 RMND1Q9NWS8 449 aa25.35■■□□□ 1.65
PNKP-201ENST00000322344 SLC4A8Q2Y0W8 1093 aa25.34■■□□□ 1.65
PNKP-201ENST00000322344 FILIP1LQ4L180 1135 aa25.34■■□□□ 1.65
PNKP-201ENST00000322344 STAG2Q8N3U4 1231 aa25.34■■□□□ 1.65
PNKP-201ENST00000322344 RTFDC1Q9BY42 306 aaPredicted RBP25.34■■□□□ 1.65
PNKP-201ENST00000322344 CCDC194A0A1B0GVG4 234 aa25.34■■□□□ 1.65
PNKP-201ENST00000322344 GOLGA8FQ08AF8 430 aa25.34■■□□□ 1.65
PNKP-201ENST00000322344 GOLGA8DPQ0D2H9 430 aa25.34■■□□□ 1.65
PNKP-201ENST00000322344 IL17AQ16552 155 aa25.34■■□□□ 1.65
PNKP-201ENST00000322344 KLHL10Q6JEL2 608 aa25.34■■□□□ 1.65
PNKP-201ENST00000322344 APTXQ7Z2E3 356 aaKnown RBP25.34■■□□□ 1.65
PNKP-201ENST00000322344 PPP2R2CQ9Y2T4 447 aa25.34■■□□□ 1.65
PNKP-201ENST00000322344 SPATA31A6Q5VVP1 1343 aa25.33■■□□□ 1.65
PNKP-201ENST00000322344 M0R2N6 131 aa25.33■■□□□ 1.65
PNKP-201ENST00000322344 PLCG2P16885 1265 aa25.33■■□□□ 1.65
PNKP-201ENST00000322344 NAA30Q147X3 362 aaPredicted RBP25.33■■□□□ 1.65
PNKP-201ENST00000322344 PRR5LQ6MZQ0 368 aa25.33■■□□□ 1.65
PNKP-201ENST00000322344 USP17L3A6NCW0 530 aa25.32■■□□□ 1.64
PNKP-201ENST00000322344 USP17L4A6NCW7 530 aa25.32■■□□□ 1.64
PNKP-201ENST00000322344 PALM3A6NDB9 673 aaPredicted RBP25.32■■□□□ 1.64
PNKP-201ENST00000322344 CASP1P29466 404 aa25.32■■□□□ 1.64
PNKP-201ENST00000322344 GPSM2P81274 684 aa25.32■■□□□ 1.64
PNKP-201ENST00000322344 PTPN21Q16825 1174 aa25.32■■□□□ 1.64
PNKP-201ENST00000322344 TRIM65Q6PJ69 517 aa25.32■■□□□ 1.64
PNKP-201ENST00000322344 USP17L1Q7RTZ2 530 aa25.32■■□□□ 1.64
PNKP-201ENST00000322344 ZNF397Q8NF99 534 aaPredicted RBP25.32■■□□□ 1.64
PNKP-201ENST00000322344 GPKOWQ92917 476 aaPredicted RBP eCLIP25.32■■□□□ 1.64
PNKP-201ENST00000322344 PANX2Q96RD6 677 aa25.32■■□□□ 1.64
PNKP-201ENST00000322344 CD209Q9NNX6 404 aa25.32■■□□□ 1.64
PNKP-201ENST00000322344 FAM205AQ6ZU69 1335 aa25.32■■□□□ 1.64
PNKP-201ENST00000322344 AKR1B15C9JRZ8 316 aaPredicted RBP25.32■■□□□ 1.64
PNKP-201ENST00000322344 UBAP1LF5GYI3 381 aa25.32■■□□□ 1.64
PNKP-201ENST00000322344 IL1R1P14778 569 aa25.32■■□□□ 1.64
PNKP-201ENST00000322344 RASA1P20936 1047 aa25.32■■□□□ 1.64
PNKP-201ENST00000322344 GRIK5Q16478 980 aa25.32■■□□□ 1.64
PNKP-201ENST00000322344 CRY2Q49AN0 593 aa25.32■■□□□ 1.64
PNKP-201ENST00000322344 FAM182BQ5T319 152 aa25.32■■□□□ 1.64
PNKP-201ENST00000322344 TMEM47Q9BQJ4 181 aa25.32■■□□□ 1.64
PNKP-201ENST00000322344 BARHL2Q9NY43 387 aa25.32■■□□□ 1.64
PNKP-201ENST00000322344 ADD3Q9UEY8 706 aaKnown RBP25.32■■□□□ 1.64
PNKP-201ENST00000322344 DNAI1Q9UI46 699 aa25.32■■□□□ 1.64
PNKP-201ENST00000322344 GPR75-ASB3A0A0A6YYF3 556 aa25.31■■□□□ 1.64
PNKP-201ENST00000322344 ADAMTS3O15072 1205 aa25.31■■□□□ 1.64
PNKP-201ENST00000322344 STX17P56962 302 aa25.31■■□□□ 1.64
PNKP-201ENST00000322344 ST5P78524 1137 aa25.31■■□□□ 1.64
PNKP-201ENST00000322344 MAPKAPK5Q8IW41 473 aa25.31■■□□□ 1.64
PNKP-201ENST00000322344 SLF2Q8IX21 1173 aa25.31■■□□□ 1.64
PNKP-201ENST00000322344 RBM17Q96I25 401 aaKnown RBP25.31■■□□□ 1.64
PNKP-201ENST00000322344 SRRTQ9BXP5 876 aaKnown RBP25.31■■□□□ 1.64
PNKP-201ENST00000322344 RWDD2AQ9UIY3 292 aa25.31■■□□□ 1.64
PNKP-201ENST00000322344 GGA1Q9UJY5 639 aa25.31■■□□□ 1.64
PNKP-201ENST00000322344 LAD1O00515 517 aa25.3■■□□□ 1.64
PNKP-201ENST00000322344 UFL1O94874 794 aa25.3■■□□□ 1.64
PNKP-201ENST00000322344 BTDP43251 543 aa25.3■■□□□ 1.64
PNKP-201ENST00000322344 WWC2Q6AWC2 1192 aa25.3■■□□□ 1.64
PNKP-201ENST00000322344 C16orf86Q6ZW13 317 aa25.3■■□□□ 1.64
PNKP-201ENST00000322344 NAA15Q9BXJ9 866 aaKnown RBP25.3■■□□□ 1.64
PNKP-201ENST00000322344 PCDHA6Q9UN73 950 aa25.3■■□□□ 1.64
PNKP-201ENST00000322344 PCDHA8Q9Y5H6 950 aa25.3■■□□□ 1.64
PNKP-201ENST00000322344 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.3■■□□□ 1.641e-6■■□□□ 13.1
PNKP-201ENST00000322344 PBX1P40424 430 aa25.3■■□□□ 1.64
PNKP-201ENST00000322344 ADKP55263 362 aaKnown RBP25.3■■□□□ 1.64
PNKP-201ENST00000322344 SPAG1Q07617 926 aa25.3■■□□□ 1.64
PNKP-201ENST00000322344 DTHD1Q6ZMT9 781 aa25.3■■□□□ 1.64
PNKP-201ENST00000322344 PPFIBP1Q86W92 1011 aa25.3■■□□□ 1.64
PNKP-201ENST00000322344 SPZ1Q9BXG8 430 aa25.3■■□□□ 1.64
PNKP-201ENST00000322344 STXBP3O00186 592 aa25.29■■□□□ 1.64
PNKP-201ENST00000322344 SEMA3FQ13275 785 aa25.29■■□□□ 1.64
PNKP-201ENST00000322344 ZNF658Q5TYW1 1059 aaPredicted RBP25.29■■□□□ 1.64
PNKP-201ENST00000322344 RRAGBQ5VZM2 374 aa25.29■■□□□ 1.64
PNKP-201ENST00000322344 SMAP1Q8IYB5 467 aaPredicted RBP25.29■■□□□ 1.64
PNKP-201ENST00000322344 CCDC12Q8WUD4 166 aaPredicted RBP25.29■■□□□ 1.64
PNKP-201ENST00000322344 FAM163AQ96GL9 167 aaPredicted RBP25.29■■□□□ 1.64
PNKP-201ENST00000322344 STX8Q9UNK0 236 aa25.29■■□□□ 1.64
PNKP-201ENST00000322344 CTNND2Q9UQB3 1225 aa25.29■■□□□ 1.64
PNKP-201ENST00000322344 TYW1BQ6NUM6 668 aa25.29■■□□□ 1.64
PNKP-201ENST00000322344 HEATR3Q7Z4Q2 680 aa25.29■■□□□ 1.64
PNKP-201ENST00000322344 TEX11Q8IYF3 940 aa25.29■■□□□ 1.64
PNKP-201ENST00000322344 SMYD4Q8IYR2 804 aaPredicted RBP25.29■■□□□ 1.64
PNKP-201ENST00000322344 NEDD1Q8NHV4 660 aa25.29■■□□□ 1.64
PNKP-201ENST00000322344 BLZF1Q9H2G9 400 aa25.29■■□□□ 1.64
PNKP-201ENST00000322344 ITIH6Q6UXX5 1313 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms