RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 PABPC4Q13310 644 aaKnown RBP eCLIP24.66■■□□□ 1.541e-323■■■■□ 21
YBX1-201ENST00000321358 CCL15Q16663 113 aa24.66■■□□□ 1.54
YBX1-201ENST00000321358 ASPRV1Q53RT3 343 aa24.66■■□□□ 1.54
YBX1-201ENST00000321358 FANCBQ8NB91 859 aa24.66■■□□□ 1.54
YBX1-201ENST00000321358 CAPNS2Q96L46 248 aa24.66■■□□□ 1.54
YBX1-201ENST00000321358 SLKQ9H2G2 1235 aaPredicted RBP24.66■■□□□ 1.54
YBX1-201ENST00000321358 TPCN1Q9ULQ1 816 aa24.66■■□□□ 1.54
YBX1-201ENST00000321358 GNAQP50148 359 aa24.66■■□□□ 1.54
YBX1-201ENST00000321358 IKQ13123 557 aaPredicted RBP24.66■■□□□ 1.54
YBX1-201ENST00000321358 TANGO6Q9C0B7 1094 aa24.66■■□□□ 1.54
YBX1-201ENST00000321358 SH2B1Q9NRF2 756 aaPredicted RBP24.66■■□□□ 1.54
YBX1-201ENST00000321358 ATAD5Q96QE3 1844 aa24.65■■□□□ 1.54
YBX1-201ENST00000321358 DHX16O60231 1041 aaKnown RBP24.65■■□□□ 1.54
YBX1-201ENST00000321358 SNHG28P0DPA3 235 aa24.65■■□□□ 1.54
YBX1-201ENST00000321358 RXRAP19793 462 aa24.65■■□□□ 1.54
YBX1-201ENST00000321358 SREBF2Q12772 1141 aa24.65■■□□□ 1.54
YBX1-201ENST00000321358 STK3Q13188 491 aa24.65■■□□□ 1.54
YBX1-201ENST00000321358 GRM4Q14833 912 aa24.65■■□□□ 1.54
YBX1-201ENST00000321358 RTN1Q16799 776 aa24.65■■□□□ 1.54
YBX1-201ENST00000321358 FAM83BQ5T0W9 1011 aa24.65■■□□□ 1.54
YBX1-201ENST00000321358 RAB11FIP4Q86YS3 637 aa24.65■■□□□ 1.54
YBX1-201ENST00000321358 CCDC144CPQ8IYA2 1237 aa24.65■■□□□ 1.54
YBX1-201ENST00000321358 MS4A4AQ96JQ5 239 aa24.65■■□□□ 1.54
YBX1-201ENST00000321358 RPAP3Q9H6T3 665 aaPredicted RBP24.65■■□□□ 1.54
YBX1-201ENST00000321358 RBM28Q9NW13 759 aaKnown RBP24.65■■□□□ 1.54
YBX1-201ENST00000321358 FAM155AB1AL88 458 aaPredicted RBP24.64■■□□□ 1.53
YBX1-201ENST00000321358 ZNF543Q08ER8 600 aa24.64■■□□□ 1.53
YBX1-201ENST00000321358 KIAA1755Q5JYT7 1200 aa24.64■■□□□ 1.53
YBX1-201ENST00000321358 HSCBQ8IWL3 235 aa24.64■■□□□ 1.53
YBX1-201ENST00000321358 CHURC1Q8WUH1 139 aa24.64■■□□□ 1.53
YBX1-201ENST00000321358 NUP88Q99567 741 aaPredicted RBP24.64■■□□□ 1.53
YBX1-201ENST00000321358 GPCPD1Q9NPB8 672 aa24.64■■□□□ 1.53
YBX1-201ENST00000321358 AGTPBP1Q9UPW5 1226 aa24.64■■□□□ 1.53
YBX1-201ENST00000321358 FRMPD2Q68DX3 1309 aaPredicted RBP24.63■■□□□ 1.53
YBX1-201ENST00000321358 USP17L15C9J2P7 530 aa24.63■■□□□ 1.53
YBX1-201ENST00000321358 USP17L13C9JLJ4 530 aa24.63■■□□□ 1.53
YBX1-201ENST00000321358 USP17L11C9JVI0 530 aa24.63■■□□□ 1.53
YBX1-201ENST00000321358 USP17L18D6R9N7 530 aa24.63■■□□□ 1.53
YBX1-201ENST00000321358 USP17L22D6RA61 530 aa24.63■■□□□ 1.53
YBX1-201ENST00000321358 USP17L17D6RBQ6 530 aa24.63■■□□□ 1.53
YBX1-201ENST00000321358 USP17L19D6RCP7 530 aa24.63■■□□□ 1.53
YBX1-201ENST00000321358 USP17L20D6RJB6 530 aa24.63■■□□□ 1.53
YBX1-201ENST00000321358 USP17L24Q0WX57 530 aa24.63■■□□□ 1.53
YBX1-201ENST00000321358 DGKZQ13574 1117 aa24.63■■□□□ 1.53
YBX1-201ENST00000321358 OTUD7BQ6GQQ9 843 aa24.63■■□□□ 1.53
YBX1-201ENST00000321358 CPLX2Q6PUV4 134 aaKnown RBP24.63■■□□□ 1.53
YBX1-201ENST00000321358 KCTD1Q719H9 257 aa24.63■■□□□ 1.53
YBX1-201ENST00000321358 SNX21Q969T3 373 aa24.63■■□□□ 1.53
YBX1-201ENST00000321358 LZTS2Q9BRK4 669 aa24.63■■□□□ 1.53
YBX1-201ENST00000321358 FEM1BQ9UK73 627 aa24.63■■□□□ 1.53
YBX1-201ENST00000321358 TMEM232C9JQI7 657 aa24.62■■□□□ 1.53
YBX1-201ENST00000321358 CPLX1O14810 134 aa24.62■■□□□ 1.53
YBX1-201ENST00000321358 STAT2P52630 851 aa24.62■■□□□ 1.53
YBX1-201ENST00000321358 CCT2P78371 535 aaKnown RBP24.62■■□□□ 1.53
YBX1-201ENST00000321358 REM2Q8IYK8 340 aaPredicted RBP24.62■■□□□ 1.53
YBX1-201ENST00000321358 KLRF2D3W0D1 207 aa24.61■■□□□ 1.53
YBX1-201ENST00000321358 PFKFB2O60825 505 aa24.61■■□□□ 1.53
YBX1-201ENST00000321358 GOLGA8HP0CJ92 632 aa24.61■■□□□ 1.53
YBX1-201ENST00000321358 ME3Q16798 604 aa24.61■■□□□ 1.53
YBX1-201ENST00000321358 FAM160B2Q86V87 743 aa24.61■■□□□ 1.53
YBX1-201ENST00000321358 BRI3BPQ8WY22 251 aa24.61■■□□□ 1.53
YBX1-201ENST00000321358 MAD2L2Q9UI95 211 aa24.61■■□□□ 1.53
YBX1-201ENST00000321358 HPS5Q9UPZ3 1129 aa24.61■■□□□ 1.53
YBX1-201ENST00000321358 PALM3A6NDB9 673 aaPredicted RBP24.61■■□□□ 1.53
YBX1-201ENST00000321358 FLOT1O75955 427 aa24.61■■□□□ 1.53
YBX1-201ENST00000321358 CD2BP2O95400 341 aaKnown RBP24.61■■□□□ 1.53
YBX1-201ENST00000321358 OSBPP22059 807 aa24.61■■□□□ 1.53
YBX1-201ENST00000321358 IRX3P78415 501 aaPredicted RBP24.61■■□□□ 1.53
YBX1-201ENST00000321358 PNMA3Q9UL41 463 aa24.61■■□□□ 1.53
YBX1-201ENST00000321358 WDR33Q9C0J8 1336 aaKnown RBP24.6■■□□□ 1.53
YBX1-201ENST00000321358 TESPA1A2RU30 521 aaPredicted RBP24.6■■□□□ 1.53
YBX1-201ENST00000321358 HOXA7P31268 230 aaPredicted RBP24.6■■□□□ 1.53
YBX1-201ENST00000321358 ANP32AP39687 249 aaKnown RBP24.6■■□□□ 1.53
YBX1-201ENST00000321358 KIF23Q02241 960 aaPredicted RBP24.6■■□□□ 1.53
YBX1-201ENST00000321358 BECN1Q14457 450 aa24.6■■□□□ 1.53
YBX1-201ENST00000321358 TREML2Q5T2D2 321 aa24.6■■□□□ 1.53
YBX1-201ENST00000321358 CATSPERGQ6ZRH7 1159 aa24.6■■□□□ 1.53
YBX1-201ENST00000321358 ANKRD23Q86SG2 305 aa24.6■■□□□ 1.53
YBX1-201ENST00000321358 MOGSQ13724 837 aa24.59■■□□□ 1.53
YBX1-201ENST00000321358 COG2Q14746 738 aa24.59■■□□□ 1.53
YBX1-201ENST00000321358 SAMD1Q6SPF0 538 aaPredicted RBP24.59■■□□□ 1.53
YBX1-201ENST00000321358 RASGRP2Q7LDG7 609 aa24.59■■□□□ 1.53
YBX1-201ENST00000321358 STAG2Q8N3U4 1231 aa24.59■■□□□ 1.53
YBX1-201ENST00000321358 PRPF38AQ8NAV1 312 aaKnown RBP24.59■■□□□ 1.53
YBX1-201ENST00000321358 TMX3Q96JJ7 454 aa24.59■■□□□ 1.53
YBX1-201ENST00000321358 HOXC10Q9NYD6 342 aa24.59■■□□□ 1.53
YBX1-201ENST00000321358 SLC45A1Q9Y2W3 748 aa24.59■■□□□ 1.53
YBX1-201ENST00000321358 BTBD19C9JJ37 291 aa24.58■■□□□ 1.53
YBX1-201ENST00000321358 K7ELQ4 463 aaPredicted RBP24.58■■□□□ 1.53
YBX1-201ENST00000321358 PLA2G6O60733 806 aa24.58■■□□□ 1.53
YBX1-201ENST00000321358 CDKL5O76039 1030 aa24.58■■□□□ 1.53
YBX1-201ENST00000321358 ADD1P35611 737 aaKnown RBP24.58■■□□□ 1.53
YBX1-201ENST00000321358 MAP2K2P36507 400 aa24.58■■□□□ 1.53
YBX1-201ENST00000321358 VEGFBP49765 207 aa24.58■■□□□ 1.53
YBX1-201ENST00000321358 NECAB1Q8N987 351 aa24.58■■□□□ 1.53
YBX1-201ENST00000321358 JMYQ8N9B5 988 aa24.58■■□□□ 1.53
YBX1-201ENST00000321358 GTF3C6Q969F1 213 aa24.58■■□□□ 1.53
YBX1-201ENST00000321358 KIFC2Q96AC6 838 aa24.58■■□□□ 1.53
YBX1-201ENST00000321358 SLF1Q9BQI6 1058 aa24.58■■□□□ 1.53
YBX1-201ENST00000321358 NCOA5Q9HCD5 579 aaKnown RBP24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms