RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 SRCAPQ6ZRS2 3230 aa36.17■■■■□ 3.38
NECTIN3-201ENST00000319792 SSC5DA1L4H1 1573 aa36.17■■■■□ 3.38
NECTIN3-201ENST00000319792 A0A1W2PRG0 241 aa36.17■■■■□ 3.38
NECTIN3-201ENST00000319792 KIF28PB7ZC32 967 aa36.17■■■■□ 3.38
NECTIN3-201ENST00000319792 CTNND1O60716 968 aaKnown RBP36.17■■■■□ 3.38
NECTIN3-201ENST00000319792 U2AF2P26368 475 aaKnown RBP eCLIP36.17■■■■□ 3.384e-6■■□□□ 13.2
NECTIN3-201ENST00000319792 ATL3Q6DD88 541 aa36.17■■■■□ 3.38
NECTIN3-201ENST00000319792 GMCL1Q96IK5 515 aa36.17■■■■□ 3.38
NECTIN3-201ENST00000319792 ANP32EQ9BTT0 268 aa36.17■■■■□ 3.38
NECTIN3-201ENST00000319792 ZNF112Q9UJU3 913 aa36.17■■■■□ 3.38
NECTIN3-201ENST00000319792 TMX2Q9Y320 296 aa36.17■■■■□ 3.38
NECTIN3-201ENST00000319792 FAM177A1Q8N128 213 aaPredicted RBP36.16■■■■□ 3.38
NECTIN3-201ENST00000319792 PHF20Q9BVI0 1012 aa36.16■■■■□ 3.38
NECTIN3-201ENST00000319792 SH3GLB2Q9NR46 395 aa36.16■■■■□ 3.38
NECTIN3-201ENST00000319792 VPS54Q9P1Q0 977 aa36.16■■■■□ 3.38
NECTIN3-201ENST00000319792 F5H6K3 240 aa36.15■■■■□ 3.38
NECTIN3-201ENST00000319792 KLRC3Q07444 240 aa36.15■■■■□ 3.38
NECTIN3-201ENST00000319792 SAFBQ15424 915 aaKnown RBP eCLIP36.15■■■■□ 3.38
NECTIN3-201ENST00000319792 KCNJ14Q9UNX9 436 aa36.15■■■■□ 3.38
NECTIN3-201ENST00000319792 PRPF40AO75400 957 aaKnown RBP36.14■■■■□ 3.38
NECTIN3-201ENST00000319792 NCLP19338 710 aaKnown RBP36.14■■■■□ 3.38
NECTIN3-201ENST00000319792 EPHX2P34913 555 aa36.14■■■■□ 3.38
NECTIN3-201ENST00000319792 CCDC96Q2M329 555 aa36.14■■■■□ 3.38
NECTIN3-201ENST00000319792 CPVLQ9H3G5 476 aa36.14■■■■□ 3.38
NECTIN3-201ENST00000319792 NDUFB10O96000 172 aa36.13■■■■□ 3.38
NECTIN3-201ENST00000319792 CSPP1Q1MSJ5 1256 aa36.13■■■■□ 3.38
NECTIN3-201ENST00000319792 ZC3H15Q8WU90 426 aaKnown RBP36.13■■■■□ 3.38
NECTIN3-201ENST00000319792 DCPSQ96C86 337 aaKnown RBP36.13■■■■□ 3.38
NECTIN3-201ENST00000319792 RRP36Q96EU6 259 aaKnown RBP36.13■■■■□ 3.38
NECTIN3-201ENST00000319792 FOXP1Q9H334 677 aaPredicted RBP36.13■■■■□ 3.38
NECTIN3-201ENST00000319792 GPCPD1Q9NPB8 672 aa36.13■■■■□ 3.38
NECTIN3-201ENST00000319792 SLC1A4P43007 532 aa36.13■■■■□ 3.37
NECTIN3-201ENST00000319792 SUPT20HL1Q3ZLR7 823 aa36.13■■■■□ 3.37
NECTIN3-201ENST00000319792 USP48Q86UV5 1035 aa36.13■■■■□ 3.37
NECTIN3-201ENST00000319792 ACER1Q8TDN7 264 aa36.13■■■■□ 3.37
NECTIN3-201ENST00000319792 SH2D4AQ9H788 454 aa36.13■■■■□ 3.37
NECTIN3-201ENST00000319792 GDPD2Q9HCC8 539 aa36.13■■■■□ 3.37
NECTIN3-201ENST00000319792 VEGFAP15692 232 aaPredicted RBP36.12■■■■□ 3.37
NECTIN3-201ENST00000319792 DIS3L2Q8IYB7 885 aaKnown RBP36.12■■■■□ 3.37
NECTIN3-201ENST00000319792 PIBF1Q8WXW3 757 aa36.12■■■■□ 3.37
NECTIN3-201ENST00000319792 ZNF396Q96N95 335 aaPredicted RBP36.12■■■■□ 3.37
NECTIN3-201ENST00000319792 SCAND2PQ9GZW5 306 aaPredicted RBP36.12■■■■□ 3.37
NECTIN3-201ENST00000319792 UBA5Q9GZZ9 404 aa36.12■■■■□ 3.37
NECTIN3-201ENST00000319792 IQCA1LA6NCM1 817 aa36.11■■■■□ 3.37
NECTIN3-201ENST00000319792 FIBPO43427 364 aa36.11■■■■□ 3.37
NECTIN3-201ENST00000319792 ECE1P42892 770 aa36.11■■■■□ 3.37
NECTIN3-201ENST00000319792 SKOR2Q2VWA4 1001 aaPredicted RBP36.11■■■■□ 3.37
NECTIN3-201ENST00000319792 PRAMEF18Q5VWM3 479 aa36.11■■■■□ 3.37
NECTIN3-201ENST00000319792 CFAP45Q9UL16 551 aa36.11■■■■□ 3.37
NECTIN3-201ENST00000319792 PAPPA2Q9BXP8 1791 aa36.11■■■■□ 3.37
NECTIN3-201ENST00000319792 TRAK2O60296 914 aa36.1■■■■□ 3.37
NECTIN3-201ENST00000319792 MYSM1Q5VVJ2 828 aa36.1■■■■□ 3.37
NECTIN3-201ENST00000319792 KCTD1Q719H9 257 aa36.1■■■■□ 3.37
NECTIN3-201ENST00000319792 GOPCQ9HD26 462 aa36.1■■■■□ 3.37
NECTIN3-201ENST00000319792 FRMD4AQ9P2Q2 1039 aaPredicted RBP36.1■■■■□ 3.37
NECTIN3-201ENST00000319792 ELP1O95163 1332 aa36.1■■■■□ 3.37
NECTIN3-201ENST00000319792 NPY5RQ15761 445 aa36.09■■■■□ 3.37
NECTIN3-201ENST00000319792 TTBK2Q6IQ55 1244 aa36.09■■■■□ 3.37
NECTIN3-201ENST00000319792 SULF1Q8IWU6 871 aa36.09■■■■□ 3.37
NECTIN3-201ENST00000319792 MTMR8Q96EF0 704 aa36.09■■■■□ 3.37
NECTIN3-201ENST00000319792 BTBD18B2RXH4 712 aa36.08■■■■□ 3.37
NECTIN3-201ENST00000319792 GNL2Q13823 731 aaKnown RBP36.08■■■■□ 3.37
NECTIN3-201ENST00000319792 WWC2Q6AWC2 1192 aa36.08■■■■□ 3.37
NECTIN3-201ENST00000319792 NOSTRINQ8IVI9 506 aa36.08■■■■□ 3.37
NECTIN3-201ENST00000319792 PIGSQ96S52 555 aa36.08■■■■□ 3.37
NECTIN3-201ENST00000319792 TAF1DQ9H5J8 278 aaPredicted RBP36.08■■■■□ 3.37
NECTIN3-201ENST00000319792 BARHL2Q9NY43 387 aa36.08■■■■□ 3.37
NECTIN3-201ENST00000319792 TFIP11Q9UBB9 837 aaKnown RBP36.08■■■■□ 3.37
NECTIN3-201ENST00000319792 SEC63Q9UGP8 760 aaKnown RBP36.08■■■■□ 3.37
NECTIN3-201ENST00000319792 hCG_1984214I3L0E3 225 aa36.08■■■■□ 3.37
NECTIN3-201ENST00000319792 INPP5BP32019 993 aa36.08■■■■□ 3.37
NECTIN3-201ENST00000319792 ADGRF4Q8IZF3 695 aa36.08■■■■□ 3.37
NECTIN3-201ENST00000319792 ZNF713Q8N859 430 aaPredicted RBP36.08■■■■□ 3.37
NECTIN3-201ENST00000319792 VCPKMTQ9H867 229 aa36.08■■■■□ 3.37
NECTIN3-201ENST00000319792 JMJD4Q9H9V9 463 aa36.08■■■■□ 3.37
NECTIN3-201ENST00000319792 PHIPQ8WWQ0 1821 aa36.07■■■■□ 3.37
NECTIN3-201ENST00000319792 POTECB2RU33 542 aa36.07■■■■□ 3.36
NECTIN3-201ENST00000319792 STXBP3O00186 592 aa36.07■■■■□ 3.36
NECTIN3-201ENST00000319792 KRT2P35908 639 aa36.07■■■■□ 3.36
NECTIN3-201ENST00000319792 SCYL3Q8IZE3 742 aa36.07■■■■□ 3.36
NECTIN3-201ENST00000319792 CCDC148Q8NFR7 591 aa36.07■■■■□ 3.36
NECTIN3-201ENST00000319792 GPKOWQ92917 476 aaPredicted RBP eCLIP36.07■■■■□ 3.36
NECTIN3-201ENST00000319792 RAD21O60216 631 aa36.06■■■■□ 3.36
NECTIN3-201ENST00000319792 BMP3P12645 472 aa36.06■■■■□ 3.36
NECTIN3-201ENST00000319792 LEO1Q8WVC0 666 aaPredicted RBP36.06■■■■□ 3.36
NECTIN3-201ENST00000319792 BRMS1Q9HCU9 246 aa36.06■■■■□ 3.36
NECTIN3-201ENST00000319792 CALML3P27482 149 aa36.05■■■■□ 3.36
NECTIN3-201ENST00000319792 BTNL9Q6UXG8 535 aa36.05■■■■□ 3.36
NECTIN3-201ENST00000319792 HEATR3Q7Z4Q2 680 aa36.05■■■■□ 3.36
NECTIN3-201ENST00000319792 OXER1Q8TDS5 423 aa36.05■■■■□ 3.36
NECTIN3-201ENST00000319792 KLRG1Q96E93 195 aa36.05■■■■□ 3.36
NECTIN3-201ENST00000319792 USP28Q96RU2 1077 aa36.05■■■■□ 3.36
NECTIN3-201ENST00000319792 WRNIP1Q96S55 665 aa36.05■■■■□ 3.36
NECTIN3-201ENST00000319792 VAT1LQ9HCJ6 419 aa36.05■■■■□ 3.36
NECTIN3-201ENST00000319792 ADM5C9JUS6 153 aa36.04■■■■□ 3.36
NECTIN3-201ENST00000319792 TYW1BQ6NUM6 668 aa36.04■■■■□ 3.36
NECTIN3-201ENST00000319792 HOMER1Q86YM7 354 aa36.04■■■■□ 3.36
NECTIN3-201ENST00000319792 SPATA32Q96LK8 384 aa36.04■■■■□ 3.36
NECTIN3-201ENST00000319792 GLIS2Q9BZE0 524 aaPredicted RBP36.04■■■■□ 3.36
NECTIN3-201ENST00000319792 NLRP5P59047 1200 aa36.03■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms