RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 RBBP5Q15291 538 aaKnown RBP9.75□□□□□ -0.85
COL6A5-202ENST00000312481 MRPL40Q9NQ50 206 aaKnown RBP9.75□□□□□ -0.85
COL6A5-202ENST00000312481 NFE2L3Q9Y4A8 694 aa9.75□□□□□ -0.85
COL6A5-202ENST00000312481 TPTE2Q6XPS3 522 aa9.75□□□□□ -0.85
COL6A5-202ENST00000312481 REXO1Q8N1G1 1221 aaKnown RBP9.75□□□□□ -0.85
COL6A5-202ENST00000312481 NOC4LQ9BVI4 516 aaKnown RBP9.75□□□□□ -0.85
COL6A5-202ENST00000312481 MKRN3Q13064 507 aaKnown RBP9.74□□□□□ -0.85
COL6A5-202ENST00000312481 RPS6KA1Q15418 735 aa9.74□□□□□ -0.85
COL6A5-202ENST00000312481 GRID2IPA4D2P6 1211 aa9.74□□□□□ -0.85
COL6A5-202ENST00000312481 PABPN1LA6NDY0 278 aaKnown RBP9.74□□□□□ -0.85
COL6A5-202ENST00000312481 FAM13AO94988 1023 aa9.74□□□□□ -0.85
COL6A5-202ENST00000312481 SRRM1Q8IYB3 904 aaKnown RBP9.74□□□□□ -0.85
COL6A5-202ENST00000312481 C3P01024 1663 aa9.74□□□□□ -0.85
COL6A5-202ENST00000312481 GAP43P17677 238 aa9.74□□□□□ -0.85
COL6A5-202ENST00000312481 SFMBT2Q5VUG0 894 aa9.74□□□□□ -0.85
COL6A5-202ENST00000312481 ZKSCAN3Q9BRR0 538 aa9.74□□□□□ -0.85
COL6A5-202ENST00000312481 DONSONQ9NYP3 566 aa9.74□□□□□ -0.85
COL6A5-202ENST00000312481 TFIP11Q9UBB9 837 aaKnown RBP9.74□□□□□ -0.85
COL6A5-202ENST00000312481 WDR44Q5JSH3 913 aa9.74□□□□□ -0.85
COL6A5-202ENST00000312481 PIP4K2CQ8TBX8 421 aa9.74□□□□□ -0.85
COL6A5-202ENST00000312481 HAUS8Q9BT25 410 aa9.74□□□□□ -0.85
COL6A5-202ENST00000312481 PANK2Q9BZ23 570 aa9.74□□□□□ -0.85
COL6A5-202ENST00000312481 SSX2IPQ9Y2D8 614 aa9.74□□□□□ -0.85
COL6A5-202ENST00000312481 PTPRUQ92729 1446 aa9.74□□□□□ -0.85
COL6A5-202ENST00000312481 RAD21O60216 631 aa9.74□□□□□ -0.85
COL6A5-202ENST00000312481 PDE8AO60658 829 aa9.74□□□□□ -0.85
COL6A5-202ENST00000312481 HIP1RO75146 1068 aa9.74□□□□□ -0.85
COL6A5-202ENST00000312481 ZNF131P52739 623 aa9.74□□□□□ -0.85
COL6A5-202ENST00000312481 CABS1Q96KC9 395 aa9.74□□□□□ -0.85
COL6A5-202ENST00000312481 CCDC8Q9H0W5 538 aaPredicted RBP9.74□□□□□ -0.85
COL6A5-202ENST00000312481 MYO18AQ92614 2054 aaKnown RBP9.74□□□□□ -0.85
COL6A5-202ENST00000312481 IGSF1Q8N6C5 1336 aa9.74□□□□□ -0.85
COL6A5-202ENST00000312481 CSGALNACT2Q8N6G5 542 aa9.74□□□□□ -0.85
COL6A5-202ENST00000312481 ENOX1Q8TC92 643 aaKnown RBP9.74□□□□□ -0.85
COL6A5-202ENST00000312481 XAGE3Q8WTP9 111 aa9.74□□□□□ -0.85
COL6A5-202ENST00000312481 CCDC113Q9H0I3 377 aa9.74□□□□□ -0.85
COL6A5-202ENST00000312481 KLHL14Q9P2G3 628 aa9.74□□□□□ -0.85
COL6A5-202ENST00000312481 TMEM51Q9NW97 253 aa9.74□□□□□ -0.85
COL6A5-202ENST00000312481 RWDD2AQ9UIY3 292 aa9.74□□□□□ -0.85
COL6A5-202ENST00000312481 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.74□□□□□ -0.85
COL6A5-202ENST00000312481 SUN1O94901 812 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 NNTQ13423 1086 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 PPP1R7Q15435 360 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 MAP7D1Q3KQU3 841 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 TCERG1LQ5VWI1 586 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 ARHGEF25Q86VW2 580 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 MAP3K19Q56UN5 1328 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 USP31Q70CQ4 1352 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 F6X3S4 739 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 GGPS1O95749 300 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 MEX3CQ5U5Q3 659 aaKnown RBP9.73□□□□□ -0.85
COL6A5-202ENST00000312481 TTC39CQ8N584 583 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 SLC4A4Q9Y6R1 1079 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 ZKSCAN8Q15776 578 aaPredicted RBP9.73□□□□□ -0.85
COL6A5-202ENST00000312481 TTC38Q5R3I4 469 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 GPATCH4Q5T3I0 446 aaKnown RBP9.73□□□□□ -0.85
COL6A5-202ENST00000312481 PPP1R18Q6NYC8 613 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 MICALL1Q8N3F8 863 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 BCL2L12Q9HB09 334 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 XRCC5P13010 732 aaKnown RBP9.73□□□□□ -0.85
COL6A5-202ENST00000312481 ZNF365Q70YC5 407 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 SENP1Q9P0U3 644 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 GUCA1BQ9UMX6 200 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 TNNQ9UQP3 1299 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 PCDHB13Q9Y5F0 798 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 PASKQ96RG2 1323 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 TROVE2P10155 538 aaKnown RBP eCLIP9.73□□□□□ -0.85
COL6A5-202ENST00000312481 ASPHQ12797 758 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 GCKRQ14397 625 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 SLC52A2Q9HAB3 445 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 HOXC9P31274 260 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 SYT10Q6XYQ8 523 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 KRBA2Q6ZNG9 492 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 RNF168Q8IYW5 571 aaPredicted RBP9.73□□□□□ -0.85
COL6A5-202ENST00000312481 AMFRQ9UKV5 643 aa9.73□□□□□ -0.85
COL6A5-202ENST00000312481 ABCB11O95342 1321 aa9.72□□□□□ -0.85
COL6A5-202ENST00000312481 PODXLO00592 558 aa9.72□□□□□ -0.85
COL6A5-202ENST00000312481 ASIC2Q16515 512 aa9.72□□□□□ -0.85
COL6A5-202ENST00000312481 ARHGEF10LQ9HCE6 1279 aa9.72□□□□□ -0.85
COL6A5-202ENST00000312481 ATP8A2Q9NTI2 1148 aa9.72□□□□□ -0.85
COL6A5-202ENST00000312481 MTMR6Q9Y217 621 aa9.72□□□□□ -0.85
COL6A5-202ENST00000312481 TECPR2O15040 1411 aa9.72□□□□□ -0.85
COL6A5-202ENST00000312481 KRT9P35527 623 aa9.72□□□□□ -0.85
COL6A5-202ENST00000312481 AKNAD1Q5T1N1 836 aa9.72□□□□□ -0.85
COL6A5-202ENST00000312481 MID2Q9UJV3 735 aa9.72□□□□□ -0.85
COL6A5-202ENST00000312481 NEDD9Q14511 834 aa9.72□□□□□ -0.85
COL6A5-202ENST00000312481 THAP9Q9H5L6 903 aa9.72□□□□□ -0.85
COL6A5-202ENST00000312481 BICC1Q9H694 974 aaKnown RBP9.72□□□□□ -0.85
COL6A5-202ENST00000312481 BATF3Q9NR55 127 aa9.72□□□□□ -0.85
COL6A5-202ENST00000312481 PLCB4Q15147 1175 aa9.72□□□□□ -0.85
COL6A5-202ENST00000312481 KRT28Q7Z3Y7 464 aa9.72□□□□□ -0.85
COL6A5-202ENST00000312481 CFAP73A6NFT4 308 aa9.72□□□□□ -0.85
COL6A5-202ENST00000312481 TNNI2P48788 182 aa9.72□□□□□ -0.85
COL6A5-202ENST00000312481 TMEM131LA2VDJ0 1609 aa9.72□□□□□ -0.85
COL6A5-202ENST00000312481 MSL3Q8N5Y2 521 aaKnown RBP9.71□□□□□ -0.85
COL6A5-202ENST00000312481 SYNCQ9H7C4 482 aa9.71□□□□□ -0.85
COL6A5-202ENST00000312481 SYNGAP1Q96PV0 1343 aa9.71□□□□□ -0.85
COL6A5-202ENST00000312481 LDHBP07195 334 aaKnown RBP9.71□□□□□ -0.85
COL6A5-202ENST00000312481 MATR3P43243 847 aaKnown RBP eCLIP9.71□□□□□ -0.85
COL6A5-202ENST00000312481 DTNBP1Q96EV8 351 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms