RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 SLFN13Q68D06 897 aa14.24□□□□□ -0.13
SCFD1-201ENST00000311943 RUFY2Q8WXA3 655 aa14.24□□□□□ -0.13
SCFD1-201ENST00000311943 MKL1Q969V6 931 aa14.24□□□□□ -0.13
SCFD1-201ENST00000311943 COL11A1P12107 1806 aaPredicted RBP14.23□□□□□ -0.13
SCFD1-201ENST00000311943 E7EWF7 191 aa14.23□□□□□ -0.13
SCFD1-201ENST00000311943 TNPO2O14787 897 aaKnown RBP14.23□□□□□ -0.13
SCFD1-201ENST00000311943 GOLGA8HP0CJ92 632 aa14.23□□□□□ -0.13
SCFD1-201ENST00000311943 DSG3P32926 999 aa14.23□□□□□ -0.13
SCFD1-201ENST00000311943 PLS1Q14651 629 aa14.23□□□□□ -0.13
SCFD1-201ENST00000311943 TMEM132BQ14DG7 1078 aa14.23□□□□□ -0.13
SCFD1-201ENST00000311943 WDR78Q5VTH9 848 aa14.23□□□□□ -0.13
SCFD1-201ENST00000311943 RASEFQ8IZ41 740 aa14.23□□□□□ -0.13
SCFD1-201ENST00000311943 KIFC2Q96AC6 838 aa14.23□□□□□ -0.13
SCFD1-201ENST00000311943 MORF4L1Q9UBU8 362 aa14.23□□□□□ -0.13
SCFD1-201ENST00000311943 RIPK3Q9Y572 518 aa14.23□□□□□ -0.13
SCFD1-201ENST00000311943 CDC45O75419 566 aa14.22□□□□□ -0.13
SCFD1-201ENST00000311943 NOVP48745 357 aa14.22□□□□□ -0.13
SCFD1-201ENST00000311943 ANTXR2P58335 489 aa14.22□□□□□ -0.13
SCFD1-201ENST00000311943 PABPC4Q13310 644 aaKnown RBP eCLIP14.22□□□□□ -0.133e-10■■■□□ 16.3
SCFD1-201ENST00000311943 FBXO46Q6PJ61 603 aaPredicted RBP14.22□□□□□ -0.13
SCFD1-201ENST00000311943 LBX2Q6XYB7 198 aa14.22□□□□□ -0.13
SCFD1-201ENST00000311943 GPRC5AQ8NFJ5 357 aa14.22□□□□□ -0.13
SCFD1-201ENST00000311943 TCEANC2Q96MN5 208 aa14.22□□□□□ -0.13
SCFD1-201ENST00000311943 ZNF287Q9HBT7 754 aa14.22□□□□□ -0.13
SCFD1-201ENST00000311943 PLXNB2O15031 1838 aa14.22□□□□□ -0.13
SCFD1-201ENST00000311943 MYPNQ86TC9 1320 aa14.22□□□□□ -0.13
SCFD1-201ENST00000311943 SLC27A2O14975 620 aa14.22□□□□□ -0.13
SCFD1-201ENST00000311943 WDR46O15213 610 aaKnown RBP14.22□□□□□ -0.13
SCFD1-201ENST00000311943 CPA1P15085 419 aa14.22□□□□□ -0.13
SCFD1-201ENST00000311943 CCL14Q16627 93 aa14.22□□□□□ -0.13
SCFD1-201ENST00000311943 ENAHQ8N8S7 591 aaPredicted RBP14.22□□□□□ -0.13
SCFD1-201ENST00000311943 LPAR1Q92633 364 aa14.22□□□□□ -0.13
SCFD1-201ENST00000311943 MOV10L1Q9BXT6 1211 aaKnown RBP14.22□□□□□ -0.13
SCFD1-201ENST00000311943 LRRC2Q9BYS8 371 aa14.22□□□□□ -0.13
SCFD1-201ENST00000311943 GOPCQ9HD26 462 aa14.22□□□□□ -0.13
SCFD1-201ENST00000311943 GPCPD1Q9NPB8 672 aa14.22□□□□□ -0.13
SCFD1-201ENST00000311943 SRRDQ9UH36 339 aa14.22□□□□□ -0.13
SCFD1-201ENST00000311943 GJD2Q9UKL4 321 aa14.22□□□□□ -0.13
SCFD1-201ENST00000311943 TMEM232C9JQI7 657 aa14.21□□□□□ -0.13
SCFD1-201ENST00000311943 GCLCP48506 637 aaPredicted RBP14.21□□□□□ -0.13
SCFD1-201ENST00000311943 FCGRTP55899 365 aa14.21□□□□□ -0.13
SCFD1-201ENST00000311943 NECTIN1Q15223 517 aa14.21□□□□□ -0.13
SCFD1-201ENST00000311943 MTFR1Q15390 333 aa14.21□□□□□ -0.13
SCFD1-201ENST00000311943 ADCK5Q3MIX3 580 aa14.21□□□□□ -0.13
SCFD1-201ENST00000311943 CPXCR1Q8N123 301 aa14.21□□□□□ -0.13
SCFD1-201ENST00000311943 ESR2Q92731 530 aa14.21□□□□□ -0.13
SCFD1-201ENST00000311943 SMCHD1A6NHR9 2005 aa14.21□□□□□ -0.13
SCFD1-201ENST00000311943 TNKSO95271 1327 aa14.21□□□□□ -0.14
SCFD1-201ENST00000311943 CYP2B6P20813 491 aa14.2□□□□□ -0.14
SCFD1-201ENST00000311943 KIF22Q14807 665 aa14.2□□□□□ -0.14
SCFD1-201ENST00000311943 CREB3L3Q68CJ9 461 aa14.2□□□□□ -0.14
SCFD1-201ENST00000311943 GPR142Q7Z601 462 aa14.2□□□□□ -0.14
SCFD1-201ENST00000311943 RAB11FIP4Q86YS3 637 aa14.2□□□□□ -0.14
SCFD1-201ENST00000311943 REPS2Q8NFH8 660 aa14.2□□□□□ -0.14
SCFD1-201ENST00000311943 RAVER2Q9HCJ3 691 aaKnown RBP14.2□□□□□ -0.14
SCFD1-201ENST00000311943 CTNNA3Q9UI47 895 aa14.2□□□□□ -0.14
SCFD1-201ENST00000311943 PPP1R9AQ9ULJ8 1098 aa14.2□□□□□ -0.14
SCFD1-201ENST00000311943 DDX49Q9Y6V7 483 aaKnown RBP14.2□□□□□ -0.14
SCFD1-201ENST00000311943 U3KPZ7 1027 aaPredicted RBP14.2□□□□□ -0.14
SCFD1-201ENST00000311943 POTEFA5A3E0 1075 aa14.2□□□□□ -0.14
SCFD1-201ENST00000311943 VWA5AO00534 786 aa14.2□□□□□ -0.14
SCFD1-201ENST00000311943 BMP3P12645 472 aa14.2□□□□□ -0.14
SCFD1-201ENST00000311943 ERCC3P19447 782 aa14.2□□□□□ -0.14
SCFD1-201ENST00000311943 SLC1A4P43007 532 aa14.2□□□□□ -0.14
SCFD1-201ENST00000311943 ERICH6BQ5W0A0 696 aa14.2□□□□□ -0.14
SCFD1-201ENST00000311943 ZSCAN10Q96SZ4 725 aaPredicted RBP14.2□□□□□ -0.14
SCFD1-201ENST00000311943 UBA5Q9GZZ9 404 aa14.2□□□□□ -0.14
SCFD1-201ENST00000311943 SH2D4AQ9H788 454 aa14.2□□□□□ -0.14
SCFD1-201ENST00000311943 ZNF214Q9UL59 606 aaPredicted RBP14.2□□□□□ -0.14
SCFD1-201ENST00000311943 KIAA1211Q6ZU35 1233 aa14.19□□□□□ -0.14
SCFD1-201ENST00000311943 GMCL1P1Q8NEA9 526 aa14.19□□□□□ -0.14
SCFD1-201ENST00000311943 SPATC1LQ9H0A9 340 aa14.19□□□□□ -0.14
SCFD1-201ENST00000311943 FLRT1Q9NZU1 646 aa14.19□□□□□ -0.14
SCFD1-201ENST00000311943 ADAMTS5Q9UNA0 930 aa14.19□□□□□ -0.14
SCFD1-201ENST00000311943 RABGAP1Q9Y3P9 1069 aa14.19□□□□□ -0.14
SCFD1-201ENST00000311943 A0A0G2JMZ2 1700 aa14.19□□□□□ -0.14
SCFD1-201ENST00000311943 SEC24BO95487 1268 aa14.19□□□□□ -0.14
SCFD1-201ENST00000311943 PDHBP11177 359 aa14.19□□□□□ -0.14
SCFD1-201ENST00000311943 SEC23AQ15436 765 aa14.19□□□□□ -0.14
SCFD1-201ENST00000311943 IFFO2Q5TF58 517 aa14.19□□□□□ -0.14
SCFD1-201ENST00000311943 MYL10Q9BUA6 226 aa14.19□□□□□ -0.14
SCFD1-201ENST00000311943 RNF41Q9H4P4 317 aaPredicted RBP14.19□□□□□ -0.14
SCFD1-201ENST00000311943 TCP11L1Q9NUJ3 509 aa14.19□□□□□ -0.14
SCFD1-201ENST00000311943 HOXC10Q9NYD6 342 aa14.19□□□□□ -0.14
SCFD1-201ENST00000311943 CCDC96Q2M329 555 aa14.18□□□□□ -0.14
SCFD1-201ENST00000311943 NCAPG2Q86XI2 1143 aa14.18□□□□□ -0.14
SCFD1-201ENST00000311943 STAG2Q8N3U4 1231 aa14.18□□□□□ -0.14
SCFD1-201ENST00000311943 NPLOC4Q8TAT6 608 aa14.18□□□□□ -0.14
SCFD1-201ENST00000311943 RAET1EQ8TD07 263 aa14.18□□□□□ -0.14
SCFD1-201ENST00000311943 AGBL1Q96MI9 1066 aa14.18□□□□□ -0.14
SCFD1-201ENST00000311943 SLF1Q9BQI6 1058 aa14.18□□□□□ -0.14
SCFD1-201ENST00000311943 PGK2P07205 417 aa14.17□□□□□ -0.14
SCFD1-201ENST00000311943 TOP1P11387 765 aaKnown RBP14.17□□□□□ -0.14
SCFD1-201ENST00000311943 RXRAP19793 462 aa14.17□□□□□ -0.14
SCFD1-201ENST00000311943 IKQ13123 557 aaPredicted RBP14.17□□□□□ -0.14
SCFD1-201ENST00000311943 SLC35G1Q2M3R5 365 aa14.17□□□□□ -0.14
SCFD1-201ENST00000311943 SLC9C1Q4G0N8 1177 aa14.17□□□□□ -0.14
SCFD1-201ENST00000311943 CCDC174Q6PII3 467 aa14.17□□□□□ -0.14
SCFD1-201ENST00000311943 MB21D2Q8IYB1 491 aaPredicted RBP14.17□□□□□ -0.14
SCFD1-201ENST00000311943 TRIB2Q92519 343 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms