RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 SPA17Q15506 151 aa14.24□□□□□ -0.13
RETREG3-201ENST00000309428 SARM1Q6SZW1 724 aa14.24□□□□□ -0.13
RETREG3-201ENST00000309428 TAX1BP1Q86VP1 789 aa14.24□□□□□ -0.13
RETREG3-201ENST00000309428 ZNF34Q8IZ26 560 aa14.24□□□□□ -0.13
RETREG3-201ENST00000309428 LRRC47Q8N1G4 583 aaKnown RBP14.24□□□□□ -0.13
RETREG3-201ENST00000309428 IFT81Q8WYA0 676 aa14.24□□□□□ -0.13
RETREG3-201ENST00000309428 ABCB6Q9NP58 842 aa14.24□□□□□ -0.13
RETREG3-201ENST00000309428 STAT6P42226 847 aa14.23□□□□□ -0.13
RETREG3-201ENST00000309428 MTIF2P46199 727 aaKnown RBP14.23□□□□□ -0.13
RETREG3-201ENST00000309428 PTPROQ16827 1216 aa14.23□□□□□ -0.13
RETREG3-201ENST00000309428 NCAPH2Q6IBW4 605 aa14.23□□□□□ -0.13
RETREG3-201ENST00000309428 FAM196AQ6ZSG2 479 aa14.23□□□□□ -0.13
RETREG3-201ENST00000309428 NYAP1Q6ZVC0 841 aa14.23□□□□□ -0.13
RETREG3-201ENST00000309428 MAATS1Q7Z4T9 603 aa14.23□□□□□ -0.13
RETREG3-201ENST00000309428 HPS3Q969F9 1004 aa14.23□□□□□ -0.13
RETREG3-201ENST00000309428 MXD3Q9BW11 206 aa14.23□□□□□ -0.13
RETREG3-201ENST00000309428 ZNF446Q9NWS9 450 aa14.23□□□□□ -0.13
RETREG3-201ENST00000309428 EP400Q96L91 3159 aa14.23□□□□□ -0.13
RETREG3-201ENST00000309428 CUTAO60888 179 aa14.23□□□□□ -0.13
RETREG3-201ENST00000309428 TOB1P50616 345 aaPredicted RBP14.23□□□□□ -0.13
RETREG3-201ENST00000309428 DOK7Q18PE1 504 aa14.23□□□□□ -0.13
RETREG3-201ENST00000309428 USP17L2Q6R6M4 530 aa14.23□□□□□ -0.13
RETREG3-201ENST00000309428 GIMAP7Q8NHV1 300 aa14.23□□□□□ -0.13
RETREG3-201ENST00000309428 AFAP1L1Q8TED9 768 aa14.23□□□□□ -0.13
RETREG3-201ENST00000309428 NAPGQ99747 312 aaPredicted RBP14.23□□□□□ -0.13
RETREG3-201ENST00000309428 TBC1D7Q9P0N9 293 aa14.23□□□□□ -0.13
RETREG3-201ENST00000309428 TRIM28Q13263 835 aaKnown RBP14.23□□□□□ -0.13
RETREG3-201ENST00000309428 KCTD19Q17RG1 926 aaPredicted RBP14.23□□□□□ -0.13
RETREG3-201ENST00000309428 RILPL1Q5EBL4 403 aa14.23□□□□□ -0.13
RETREG3-201ENST00000309428 DYMQ7RTS9 669 aa14.23□□□□□ -0.13
RETREG3-201ENST00000309428 GSPT2Q8IYD1 628 aaKnown RBP14.23□□□□□ -0.13
RETREG3-201ENST00000309428 CACNA1FO60840 1977 aa14.22□□□□□ -0.13
RETREG3-201ENST00000309428 ADAMTS3O15072 1205 aa14.22□□□□□ -0.13
RETREG3-201ENST00000309428 FMNL1O95466 1100 aaPredicted RBP14.22□□□□□ -0.13
RETREG3-201ENST00000309428 CASP14P31944 242 aa14.22□□□□□ -0.13
RETREG3-201ENST00000309428 ACTN2P35609 894 aa14.22□□□□□ -0.13
RETREG3-201ENST00000309428 CCT5P48643 541 aa14.22□□□□□ -0.13
RETREG3-201ENST00000309428 ATP1A2P50993 1020 aa14.22□□□□□ -0.13
RETREG3-201ENST00000309428 NAPAP54920 295 aa14.22□□□□□ -0.13
RETREG3-201ENST00000309428 GDAQ9Y2T3 454 aa14.22□□□□□ -0.13
RETREG3-201ENST00000309428 SAMM50Q9Y512 469 aa14.22□□□□□ -0.13
RETREG3-201ENST00000309428 A0A0U1RQJ8 604 aa14.22□□□□□ -0.13
RETREG3-201ENST00000309428 TRIM49BA6NDI0 452 aa14.22□□□□□ -0.13
RETREG3-201ENST00000309428 N4BP1O75113 896 aaKnown RBP14.22□□□□□ -0.13
RETREG3-201ENST00000309428 NKX1-1Q15270 411 aaPredicted RBP14.22□□□□□ -0.13
RETREG3-201ENST00000309428 GRIK5Q16478 980 aa14.22□□□□□ -0.13
RETREG3-201ENST00000309428 TICAM2Q86XR7 235 aa14.22□□□□□ -0.13
RETREG3-201ENST00000309428 VGLL2Q8N8G2 317 aa14.22□□□□□ -0.13
RETREG3-201ENST00000309428 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.22□□□□□ -0.13
RETREG3-201ENST00000309428 A0A1W2PQ27 194 aa14.22□□□□□ -0.13
RETREG3-201ENST00000309428 A0A1W2PQ64 194 aa14.22□□□□□ -0.13
RETREG3-201ENST00000309428 A0A1W2PQD8 194 aa14.22□□□□□ -0.13
RETREG3-201ENST00000309428 POTEB2H3BUK9 544 aa14.22□□□□□ -0.13
RETREG3-201ENST00000309428 AKR1B10O60218 316 aa14.22□□□□□ -0.13
RETREG3-201ENST00000309428 IFNAR1P17181 557 aa14.22□□□□□ -0.13
RETREG3-201ENST00000309428 PARP10Q53GL7 1025 aa14.22□□□□□ -0.13
RETREG3-201ENST00000309428 BIN2Q9UBW5 565 aaPredicted RBP14.22□□□□□ -0.13
RETREG3-201ENST00000309428 FEZ2Q9UHY8 353 aaPredicted RBP14.22□□□□□ -0.13
RETREG3-201ENST00000309428 FHOD1Q9Y613 1164 aa14.22□□□□□ -0.13
RETREG3-201ENST00000309428 GOLGA6L10A6NI86 522 aa14.21□□□□□ -0.13
RETREG3-201ENST00000309428 STIM1Q13586 685 aa14.21□□□□□ -0.13
RETREG3-201ENST00000309428 SH3RF3Q8TEJ3 882 aaPredicted RBP14.21□□□□□ -0.13
RETREG3-201ENST00000309428 PPP1R1BQ9UD71 204 aaPredicted RBP14.21□□□□□ -0.13
RETREG3-201ENST00000309428 CEP131Q9UPN4 1083 aa14.21□□□□□ -0.13
RETREG3-201ENST00000309428 HPDP32754 393 aaPredicted RBP14.21□□□□□ -0.13
RETREG3-201ENST00000309428 TXKP42681 527 aa14.21□□□□□ -0.13
RETREG3-201ENST00000309428 TNNI2P48788 182 aa14.21□□□□□ -0.13
RETREG3-201ENST00000309428 SNAP25P60880 206 aa14.21□□□□□ -0.13
RETREG3-201ENST00000309428 SOGA3Q5TF21 947 aa14.21□□□□□ -0.13
RETREG3-201ENST00000309428 SND1Q7KZF4 910 aaKnown RBP eCLIP14.21□□□□□ -0.13
RETREG3-201ENST00000309428 PNMA1Q8ND90 353 aa14.21□□□□□ -0.13
RETREG3-201ENST00000309428 TCRBV5S4A2TA0A5A2 114 aa14.21□□□□□ -0.14
RETREG3-201ENST00000309428 TADA3O75528 432 aa14.21□□□□□ -0.14
RETREG3-201ENST00000309428 NTSR2O95665 410 aa14.21□□□□□ -0.14
RETREG3-201ENST00000309428 EPS15P42566 896 aa14.21□□□□□ -0.14
RETREG3-201ENST00000309428 NTRK3Q16288 839 aa14.21□□□□□ -0.14
RETREG3-201ENST00000309428 KCTD16Q68DU8 428 aa14.21□□□□□ -0.14
RETREG3-201ENST00000309428 CNBD1Q8NA66 436 aa14.21□□□□□ -0.14
RETREG3-201ENST00000309428 GOLGA5Q8TBA6 731 aa14.21□□□□□ -0.14
RETREG3-201ENST00000309428 CCDC113Q9H0I3 377 aa14.21□□□□□ -0.14
RETREG3-201ENST00000309428 ALDH8A1Q9H2A2 487 aaPredicted RBP14.21□□□□□ -0.14
RETREG3-201ENST00000309428 RIC1Q4ADV7 1423 aa14.2□□□□□ -0.14
RETREG3-201ENST00000309428 KDM4FA0A1W2PPD8 638 aa14.2□□□□□ -0.14
RETREG3-201ENST00000309428 GTF2IP78347 998 aa14.2□□□□□ -0.14
RETREG3-201ENST00000309428 SRBD1Q8N5C6 995 aaKnown RBP14.2□□□□□ -0.14
RETREG3-201ENST00000309428 ANKRD13CQ8N6S4 541 aa14.2□□□□□ -0.14
RETREG3-201ENST00000309428 RIN2Q8WYP3 895 aaPredicted RBP14.2□□□□□ -0.14
RETREG3-201ENST00000309428 RABGGTAQ92696 567 aa14.2□□□□□ -0.14
RETREG3-201ENST00000309428 SCAF8Q9UPN6 1271 aaKnown RBP14.2□□□□□ -0.14
RETREG3-201ENST00000309428 SALL1Q9NSC2 1324 aa14.2□□□□□ -0.14
RETREG3-201ENST00000309428 TUBB4AP04350 444 aa14.2□□□□□ -0.14
RETREG3-201ENST00000309428 ARID4AP29374 1257 aaPredicted RBP14.2□□□□□ -0.14
RETREG3-201ENST00000309428 CACNB1Q02641 598 aaPredicted RBP14.2□□□□□ -0.14
RETREG3-201ENST00000309428 RBL2Q08999 1139 aa14.2□□□□□ -0.14
RETREG3-201ENST00000309428 TEX11Q8IYF3 940 aa14.2□□□□□ -0.14
RETREG3-201ENST00000309428 FAM76AQ8TAV0 307 aa14.2□□□□□ -0.14
RETREG3-201ENST00000309428 CDK5RAP3Q96JB5 506 aa14.2□□□□□ -0.14
RETREG3-201ENST00000309428 ZNF804BA4D1E1 1349 aa14.2□□□□□ -0.14
RETREG3-201ENST00000309428 NDUFAB1O14561 156 aa14.2□□□□□ -0.14
RETREG3-201ENST00000309428 GNAT2P19087 354 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms