RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 MAP3K14Q99558 947 aa20.96■□□□□ 0.95
SSSCA1-201ENST00000309328 TANGO6Q9C0B7 1094 aa20.96■□□□□ 0.95
SSSCA1-201ENST00000309328 RNF186Q9NXI6 227 aa20.96■□□□□ 0.95
SSSCA1-201ENST00000309328 SH2B2O14492 632 aaPredicted RBP20.95■□□□□ 0.94
SSSCA1-201ENST00000309328 CALM1P0DP23 149 aa20.95■□□□□ 0.94
SSSCA1-201ENST00000309328 CALM2P0DP24 149 aa20.95■□□□□ 0.94
SSSCA1-201ENST00000309328 CALM3P0DP25 149 aa20.95■□□□□ 0.94
SSSCA1-201ENST00000309328 FDX1P10109 184 aa20.95■□□□□ 0.94
SSSCA1-201ENST00000309328 RCAN1P53805 252 aa20.95■□□□□ 0.94
SSSCA1-201ENST00000309328 COG2Q14746 738 aa20.95■□□□□ 0.94
SSSCA1-201ENST00000309328 LBX2Q6XYB7 198 aa20.95■□□□□ 0.94
SSSCA1-201ENST00000309328 FAM160B2Q86V87 743 aa20.95■□□□□ 0.94
SSSCA1-201ENST00000309328 SPICE1Q8N0Z3 855 aa20.95■□□□□ 0.94
SSSCA1-201ENST00000309328 MB21D1Q8N884 522 aa20.95■□□□□ 0.94
SSSCA1-201ENST00000309328 CHURC1Q8WUH1 139 aa20.95■□□□□ 0.94
SSSCA1-201ENST00000309328 ASCC2Q9H1I8 757 aaPredicted RBP20.95■□□□□ 0.94
SSSCA1-201ENST00000309328 LY9Q9HBG7 655 aa20.95■□□□□ 0.94
SSSCA1-201ENST00000309328 FEM1BQ9UK73 627 aa20.95■□□□□ 0.94
SSSCA1-201ENST00000309328 PCNTO95613 3336 aa20.94■□□□□ 0.94
SSSCA1-201ENST00000309328 CCDC69A6NI79 296 aa20.94■□□□□ 0.94
SSSCA1-201ENST00000309328 TLR2O60603 784 aa20.94■□□□□ 0.94
SSSCA1-201ENST00000309328 DDAH1O94760 285 aa20.94■□□□□ 0.94
SSSCA1-201ENST00000309328 SNHG28P0DPA3 235 aa20.94■□□□□ 0.94
SSSCA1-201ENST00000309328 ASPRV1Q53RT3 343 aa20.94■□□□□ 0.94
SSSCA1-201ENST00000309328 SYNE3Q6ZMZ3 975 aa20.94■□□□□ 0.94
SSSCA1-201ENST00000309328 NFXL1Q6ZNB6 911 aa20.94■□□□□ 0.94
SSSCA1-201ENST00000309328 NKX2-3Q8TAU0 364 aa20.94■□□□□ 0.94
SSSCA1-201ENST00000309328 PTPRFP10586 1907 aa20.94■□□□□ 0.94
SSSCA1-201ENST00000309328 TRPA1O75762 1119 aa20.93■□□□□ 0.94
SSSCA1-201ENST00000309328 FLOT1O75955 427 aa20.93■□□□□ 0.94
SSSCA1-201ENST00000309328 PDHBP11177 359 aa20.93■□□□□ 0.94
SSSCA1-201ENST00000309328 STAT2P52630 851 aa20.93■□□□□ 0.94
SSSCA1-201ENST00000309328 FAM83BQ5T0W9 1011 aa20.93■□□□□ 0.94
SSSCA1-201ENST00000309328 CHST3Q7LGC8 479 aa20.93■□□□□ 0.94
SSSCA1-201ENST00000309328 KIF5BP33176 963 aa20.92■□□□□ 0.94
SSSCA1-201ENST00000309328 HERVK_113P62684 666 aa20.92■□□□□ 0.94
SSSCA1-201ENST00000309328 CRHR2Q13324 411 aa20.92■□□□□ 0.94
SSSCA1-201ENST00000309328 PPP2R5BQ15173 497 aa20.92■□□□□ 0.94
SSSCA1-201ENST00000309328 ANKRD1Q15327 319 aa20.92■□□□□ 0.94
SSSCA1-201ENST00000309328 KIAA1755Q5JYT7 1200 aa20.92■□□□□ 0.94
SSSCA1-201ENST00000309328 PRPF38AQ8NAV1 312 aaKnown RBP20.92■□□□□ 0.94
SSSCA1-201ENST00000309328 SLF1Q9BQI6 1058 aa20.92■□□□□ 0.94
SSSCA1-201ENST00000309328 AGXT2Q9BYV1 514 aa20.92■□□□□ 0.94
SSSCA1-201ENST00000309328 SLC12A7Q9Y666 1083 aa20.92■□□□□ 0.94
SSSCA1-201ENST00000309328 PARP1P09874 1014 aaKnown RBP20.91■□□□□ 0.94
SSSCA1-201ENST00000309328 ZNF543Q08ER8 600 aa20.91■□□□□ 0.94
SSSCA1-201ENST00000309328 DGKZQ13574 1117 aa20.91■□□□□ 0.94
SSSCA1-201ENST00000309328 CCDC96Q2M329 555 aa20.91■□□□□ 0.94
SSSCA1-201ENST00000309328 ALDH8A1Q9H2A2 487 aaPredicted RBP20.91■□□□□ 0.94
SSSCA1-201ENST00000309328 PNMA2Q9UL42 364 aa20.91■□□□□ 0.94
SSSCA1-201ENST00000309328 PPP1R9AQ9ULJ8 1098 aa20.91■□□□□ 0.94
SSSCA1-201ENST00000309328 DSG3P32926 999 aa20.9■□□□□ 0.94
SSSCA1-201ENST00000309328 GNAQP50148 359 aa20.9■□□□□ 0.94
SSSCA1-201ENST00000309328 TROAPQ12815 778 aa20.9■□□□□ 0.94
SSSCA1-201ENST00000309328 FAM110CQ1W6H9 321 aa20.9■□□□□ 0.94
SSSCA1-201ENST00000309328 BTNL9Q6UXG8 535 aa20.9■□□□□ 0.94
SSSCA1-201ENST00000309328 ZNF654Q8IZM8 581 aa20.9■□□□□ 0.94
SSSCA1-201ENST00000309328 CTCFLQ8NI51 663 aaPredicted RBP20.9■□□□□ 0.94
SSSCA1-201ENST00000309328 TBC1D32Q96NH3 1257 aa20.9■□□□□ 0.94
SSSCA1-201ENST00000309328 ISY1Q9ULR0 285 aaKnown RBP20.9■□□□□ 0.94
SSSCA1-201ENST00000309328 RABGAP1Q9Y3P9 1069 aa20.9■□□□□ 0.94
SSSCA1-201ENST00000309328 ADGRA2Q96PE1 1338 aa20.89■□□□□ 0.93
SSSCA1-201ENST00000309328 TMEM232C9JQI7 657 aa20.89■□□□□ 0.93
SSSCA1-201ENST00000309328 CYP2C8P10632 490 aa20.89■□□□□ 0.93
SSSCA1-201ENST00000309328 CTCFP49711 727 aaPredicted RBP20.89■□□□□ 0.93
SSSCA1-201ENST00000309328 IKQ13123 557 aaPredicted RBP20.89■□□□□ 0.93
SSSCA1-201ENST00000309328 ARHGEF6Q15052 776 aa20.89■□□□□ 0.93
SSSCA1-201ENST00000309328 Q6ZUG5 572 aa20.89■□□□□ 0.93
SSSCA1-201ENST00000309328 P2RX7Q99572 595 aaKnown RBP20.89■□□□□ 0.93
SSSCA1-201ENST00000309328 LZTS2Q9BRK4 669 aa20.89■□□□□ 0.93
SSSCA1-201ENST00000309328 PDRG1Q9NUG6 133 aa20.89■□□□□ 0.93
SSSCA1-201ENST00000309328 MYH4Q9Y623 1939 aa20.88■□□□□ 0.93
SSSCA1-201ENST00000309328 SPDYE16A6NNV3 312 aaPredicted RBP20.88■□□□□ 0.93
SSSCA1-201ENST00000309328 CCNA1P78396 465 aa20.88■□□□□ 0.93
SSSCA1-201ENST00000309328 C17orf99Q6UX52 265 aa20.88■□□□□ 0.93
SSSCA1-201ENST00000309328 NUP88Q99567 741 aaPredicted RBP20.88■□□□□ 0.93
SSSCA1-201ENST00000309328 LRRC2Q9BYS8 371 aa20.88■□□□□ 0.93
SSSCA1-201ENST00000309328 MORF4L1Q9UBU8 362 aa20.88■□□□□ 0.93
SSSCA1-201ENST00000309328 ADAMTS5Q9UNA0 930 aa20.88■□□□□ 0.93
SSSCA1-201ENST00000309328 CTDP1Q9Y5B0 961 aaPredicted RBP20.88■□□□□ 0.93
SSSCA1-201ENST00000309328 CCDC196A0A1B0GTZ2 297 aa20.87■□□□□ 0.93
SSSCA1-201ENST00000309328 ZBED4O75132 1171 aa20.87■□□□□ 0.93
SSSCA1-201ENST00000309328 HSPA1AP0DMV8 641 aaKnown RBP20.87■□□□□ 0.93
SSSCA1-201ENST00000309328 HSPA1BP0DMV9 641 aaKnown RBP20.87■□□□□ 0.93
SSSCA1-201ENST00000309328 COPB2P35606 906 aa20.87■□□□□ 0.93
SSSCA1-201ENST00000309328 OAZ1P54368 228 aa20.87■□□□□ 0.93
SSSCA1-201ENST00000309328 EVCP57679 992 aa20.87■□□□□ 0.93
SSSCA1-201ENST00000309328 GRM4Q14833 912 aa20.87■□□□□ 0.93
SSSCA1-201ENST00000309328 RABEP1Q15276 862 aa20.87■□□□□ 0.93
SSSCA1-201ENST00000309328 APOA5Q6Q788 366 aa20.87■□□□□ 0.93
SSSCA1-201ENST00000309328 KCTD1Q719H9 257 aa20.87■□□□□ 0.93
SSSCA1-201ENST00000309328 UPF3BQ9BZI7 483 aaKnown RBP20.87■□□□□ 0.93
SSSCA1-201ENST00000309328 RBM28Q9NW13 759 aaKnown RBP20.87■□□□□ 0.93
SSSCA1-201ENST00000309328 MTMR7Q9Y216 660 aa20.87■□□□□ 0.93
SSSCA1-201ENST00000309328 ZBTB43O43298 467 aa20.86■□□□□ 0.93
SSSCA1-201ENST00000309328 TBC1D8O95759 1140 aa20.86■□□□□ 0.93
SSSCA1-201ENST00000309328 BCRP11274 1271 aa20.86■□□□□ 0.93
SSSCA1-201ENST00000309328 SMARCA1P28370 1054 aa20.86■□□□□ 0.93
SSSCA1-201ENST00000309328 KIF22Q14807 665 aa20.86■□□□□ 0.93
SSSCA1-201ENST00000309328 GPRC5AQ8NFJ5 357 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms