RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 SHCBP1Q8NEM2 672 aa23.63■■□□□ 1.37
PDZRN3-202ENST00000308537 NEDD1Q8NHV4 660 aa23.63■■□□□ 1.37
PDZRN3-202ENST00000308537 INCENPQ9NQS7 918 aa23.63■■□□□ 1.37
PDZRN3-202ENST00000308537 ANAPC4Q9UJX5 808 aa23.63■■□□□ 1.37
PDZRN3-202ENST00000308537 FRMPD3Q5JV73 1810 aa23.63■■□□□ 1.37
PDZRN3-202ENST00000308537 NDUFB10O96000 172 aa23.62■■□□□ 1.37
PDZRN3-202ENST00000308537 FGRP09769 529 aa23.62■■□□□ 1.37
PDZRN3-202ENST00000308537 TMEM132BQ14DG7 1078 aa23.62■■□□□ 1.37
PDZRN3-202ENST00000308537 FAM83BQ5T0W9 1011 aa23.62■■□□□ 1.37
PDZRN3-202ENST00000308537 NUP88Q99567 741 aaPredicted RBP23.62■■□□□ 1.37
PDZRN3-202ENST00000308537 GOPCQ9HD26 462 aa23.62■■□□□ 1.37
PDZRN3-202ENST00000308537 F5H6K3 240 aa23.61■■□□□ 1.37
PDZRN3-202ENST00000308537 PRKAR2AP13861 404 aaKnown RBP23.61■■□□□ 1.37
PDZRN3-202ENST00000308537 ERCC3P19447 782 aa23.61■■□□□ 1.37
PDZRN3-202ENST00000308537 PDE4AP27815 886 aa23.61■■□□□ 1.37
PDZRN3-202ENST00000308537 KLRC3Q07444 240 aa23.61■■□□□ 1.37
PDZRN3-202ENST00000308537 CACNB2Q08289 660 aaPredicted RBP23.61■■□□□ 1.37
PDZRN3-202ENST00000308537 MCMDC2Q4G0Z9 681 aa23.61■■□□□ 1.37
PDZRN3-202ENST00000308537 NPLOC4Q8TAT6 608 aa23.61■■□□□ 1.37
PDZRN3-202ENST00000308537 ZNF214Q9UL59 606 aaPredicted RBP23.61■■□□□ 1.37
PDZRN3-202ENST00000308537 PPP1R9AQ9ULJ8 1098 aa23.61■■□□□ 1.37
PDZRN3-202ENST00000308537 RANBP2P49792 3224 aaKnown RBP23.61■■□□□ 1.37
PDZRN3-202ENST00000308537 ZKSCAN1P17029 563 aaPredicted RBP23.6■■□□□ 1.37
PDZRN3-202ENST00000308537 IRX6P78412 446 aaPredicted RBP23.6■■□□□ 1.37
PDZRN3-202ENST00000308537 CTDSPL2Q05D32 466 aa23.6■■□□□ 1.37
PDZRN3-202ENST00000308537 FAM47AQ5JRC9 791 aa23.6■■□□□ 1.37
PDZRN3-202ENST00000308537 ZNF444Q8N0Y2 327 aaPredicted RBP23.6■■□□□ 1.37
PDZRN3-202ENST00000308537 ZNF287Q9HBT7 754 aa23.6■■□□□ 1.37
PDZRN3-202ENST00000308537 HMX1Q9NP08 348 aaPredicted RBP23.6■■□□□ 1.37
PDZRN3-202ENST00000308537 ZMYM6O95789 1325 aa23.59■■□□□ 1.37
PDZRN3-202ENST00000308537 VWA5AO00534 786 aa23.59■■□□□ 1.37
PDZRN3-202ENST00000308537 FARP2O94887 1054 aaPredicted RBP23.59■■□□□ 1.37
PDZRN3-202ENST00000308537 FGAP02671 866 aa23.59■■□□□ 1.37
PDZRN3-202ENST00000308537 HSPD1P10809 573 aaKnown RBP23.59■■□□□ 1.37
PDZRN3-202ENST00000308537 NOVP48745 357 aa23.59■■□□□ 1.37
PDZRN3-202ENST00000308537 PDE4BQ07343 736 aa23.59■■□□□ 1.37
PDZRN3-202ENST00000308537 CCAR1Q8IX12 1150 aaKnown RBP23.59■■□□□ 1.37
PDZRN3-202ENST00000308537 TRMT44Q8IYL2 757 aaKnown RBP23.59■■□□□ 1.37
PDZRN3-202ENST00000308537 IL17RBQ9NRM6 502 aa23.59■■□□□ 1.37
PDZRN3-202ENST00000308537 CLIP2Q9UDT6 1046 aa23.59■■□□□ 1.37
PDZRN3-202ENST00000308537 SYNPO2Q9UMS6 1093 aa23.59■■□□□ 1.37
PDZRN3-202ENST00000308537 CAPN2P17655 700 aa23.58■■□□□ 1.37
PDZRN3-202ENST00000308537 SDSP20132 328 aa23.58■■□□□ 1.37
PDZRN3-202ENST00000308537 CCND3P30281 292 aaPredicted RBP23.58■■□□□ 1.37
PDZRN3-202ENST00000308537 TFAP4Q01664 338 aa23.58■■□□□ 1.37
PDZRN3-202ENST00000308537 WDR78Q5VTH9 848 aa23.58■■□□□ 1.37
PDZRN3-202ENST00000308537 NBPF3Q9H094 633 aa23.58■■□□□ 1.37
PDZRN3-202ENST00000308537 CCDC171Q6TFL3 1326 aa23.58■■□□□ 1.36
PDZRN3-202ENST00000308537 LAMA4Q16363 1823 aa23.57■■□□□ 1.36
PDZRN3-202ENST00000308537 TRIM6-TRIM34B2RNG4 842 aa23.57■■□□□ 1.36
PDZRN3-202ENST00000308537 COBLO75128 1261 aa23.57■■□□□ 1.36
PDZRN3-202ENST00000308537 TTLL1O95922 423 aa23.57■■□□□ 1.36
PDZRN3-202ENST00000308537 ADORA2AP29274 412 aa23.57■■□□□ 1.36
PDZRN3-202ENST00000308537 LHX8Q68G74 356 aa23.57■■□□□ 1.36
PDZRN3-202ENST00000308537 RIOX2Q8IUF8 465 aa23.57■■□□□ 1.36
PDZRN3-202ENST00000308537 LRRC47Q8N1G4 583 aaKnown RBP23.57■■□□□ 1.36
PDZRN3-202ENST00000308537 GMCL1P1Q8NEA9 526 aa23.57■■□□□ 1.36
PDZRN3-202ENST00000308537 DIS3LQ8TF46 1054 aaKnown RBP23.57■■□□□ 1.36
PDZRN3-202ENST00000308537 OGDHLQ9ULD0 1010 aa23.57■■□□□ 1.36
PDZRN3-202ENST00000308537 PLXNA1Q9UIW2 1896 aa23.56■■□□□ 1.36
PDZRN3-202ENST00000308537 STRNO43815 780 aa23.56■■□□□ 1.36
PDZRN3-202ENST00000308537 ORC4O43929 436 aa23.56■■□□□ 1.36
PDZRN3-202ENST00000308537 TSPY3P0CV98 308 aa23.56■■□□□ 1.36
PDZRN3-202ENST00000308537 TSPY8P0CW00 308 aa23.56■■□□□ 1.36
PDZRN3-202ENST00000308537 RILPL2Q969X0 211 aa23.56■■□□□ 1.36
PDZRN3-202ENST00000308537 MROH8Q9H579 483 aa23.56■■□□□ 1.36
PDZRN3-202ENST00000308537 IVNS1ABPQ9Y6Y0 642 aa23.56■■□□□ 1.36
PDZRN3-202ENST00000308537 NMT2O60551 498 aa23.55■■□□□ 1.36
PDZRN3-202ENST00000308537 TFRCP02786 760 aaKnown RBP23.55■■□□□ 1.36
PDZRN3-202ENST00000308537 SLC3A2P08195 630 aaKnown RBP23.55■■□□□ 1.36
PDZRN3-202ENST00000308537 ABRAQ8N0Z2 381 aa23.55■■□□□ 1.36
PDZRN3-202ENST00000308537 TRPV1Q8NER1 839 aa23.55■■□□□ 1.36
PDZRN3-202ENST00000308537 SLF1Q9BQI6 1058 aa23.55■■□□□ 1.36
PDZRN3-202ENST00000308537 TRIOBPQ9H2D6 2365 aa23.55■■□□□ 1.36
PDZRN3-202ENST00000308537 GSPT1P15170 499 aaKnown RBP23.54■■□□□ 1.36
PDZRN3-202ENST00000308537 PLS1Q14651 629 aa23.54■■□□□ 1.36
PDZRN3-202ENST00000308537 ANKLE1Q8NAG6 615 aa23.54■■□□□ 1.36
PDZRN3-202ENST00000308537 IL25Q9H293 177 aa23.54■■□□□ 1.36
PDZRN3-202ENST00000308537 RAD21O60216 631 aa23.53■■□□□ 1.36
PDZRN3-202ENST00000308537 CYP2C19P33261 490 aa23.53■■□□□ 1.36
PDZRN3-202ENST00000308537 OLFML2BQ68BL8 750 aa23.53■■□□□ 1.36
PDZRN3-202ENST00000308537 SAMD1Q6SPF0 538 aaPredicted RBP23.53■■□□□ 1.36
PDZRN3-202ENST00000308537 RASGRP2Q7LDG7 609 aa23.53■■□□□ 1.36
PDZRN3-202ENST00000308537 NCAPG2Q86XI2 1143 aa23.53■■□□□ 1.36
PDZRN3-202ENST00000308537 PAWRQ96IZ0 340 aaKnown RBP23.53■■□□□ 1.36
PDZRN3-202ENST00000308537 CWC22Q9HCG8 908 aaKnown RBP23.53■■□□□ 1.36
PDZRN3-202ENST00000308537 ATP2A1O14983 1001 aa23.52■■□□□ 1.36
PDZRN3-202ENST00000308537 SLC25A27O95847 323 aa23.52■■□□□ 1.36
PDZRN3-202ENST00000308537 CYBAP13498 195 aa23.52■■□□□ 1.36
PDZRN3-202ENST00000308537 STAT3P40763 770 aa23.52■■□□□ 1.36
PDZRN3-202ENST00000308537 RIPK3Q9Y572 518 aa23.52■■□□□ 1.36
PDZRN3-202ENST00000308537 SMCHD1A6NHR9 2005 aa23.51■■□□□ 1.35
PDZRN3-202ENST00000308537 H0YGN5 161 aa23.51■■□□□ 1.35
PDZRN3-202ENST00000308537 SLFN13Q68D06 897 aa23.51■■□□□ 1.35
PDZRN3-202ENST00000308537 TBC1D10CQ8IV04 446 aa23.51■■□□□ 1.35
PDZRN3-202ENST00000308537 PRPF38AQ8NAV1 312 aaKnown RBP23.51■■□□□ 1.35
PDZRN3-202ENST00000308537 SLC38A10Q9HBR0 1119 aa23.51■■□□□ 1.35
PDZRN3-202ENST00000308537 GMCL1Q96IK5 515 aa23.5■■□□□ 1.35
PDZRN3-202ENST00000308537 TSPY2A6NKD2 308 aa23.49■■□□□ 1.35
PDZRN3-202ENST00000308537 COL6A1P12109 1028 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms