RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 ERCC3P19447 782 aa20.26■□□□□ 0.83
HMGCLL1-202ENST00000308161 TFAP4Q01664 338 aa20.26■□□□□ 0.83
HMGCLL1-202ENST00000308161 MCMDC2Q4G0Z9 681 aa20.26■□□□□ 0.83
HMGCLL1-202ENST00000308161 DPF3Q92784 378 aa20.26■□□□□ 0.83
HMGCLL1-202ENST00000308161 ISY1Q9ULR0 285 aaKnown RBP20.26■□□□□ 0.83
HMGCLL1-202ENST00000308161 GREB1LQ9C091 1923 aaPredicted RBP20.25■□□□□ 0.83
HMGCLL1-202ENST00000308161 RLFQ13129 1914 aa20.25■□□□□ 0.83
HMGCLL1-202ENST00000308161 F5H6K3 240 aa20.25■□□□□ 0.83
HMGCLL1-202ENST00000308161 NDUFB10O96000 172 aa20.25■□□□□ 0.83
HMGCLL1-202ENST00000308161 KLRC3Q07444 240 aa20.25■□□□□ 0.83
HMGCLL1-202ENST00000308161 CACNB2Q08289 660 aaPredicted RBP20.25■□□□□ 0.83
HMGCLL1-202ENST00000308161 DPP9Q86TI2 863 aa20.25■□□□□ 0.83
HMGCLL1-202ENST00000308161 CHMP4CQ96CF2 233 aa20.25■□□□□ 0.83
HMGCLL1-202ENST00000308161 INCENPQ9NQS7 918 aa20.25■□□□□ 0.83
HMGCLL1-202ENST00000308161 A0A0G2JMZ2 1700 aa20.24■□□□□ 0.83
HMGCLL1-202ENST00000308161 IGKV6D-41A0A0C4DH26 115 aa20.24■□□□□ 0.83
HMGCLL1-202ENST00000308161 GRB14Q14449 540 aa20.24■□□□□ 0.83
HMGCLL1-202ENST00000308161 TMEM132BQ14DG7 1078 aa20.24■□□□□ 0.83
HMGCLL1-202ENST00000308161 TOMM22Q9NS69 142 aa20.24■□□□□ 0.83
HMGCLL1-202ENST00000308161 MTMR4Q9NYA4 1195 aa20.24■□□□□ 0.83
HMGCLL1-202ENST00000308161 PPP1R9AQ9ULJ8 1098 aa20.24■□□□□ 0.83
HMGCLL1-202ENST00000308161 TSPY2A6NKD2 308 aa20.23■□□□□ 0.83
HMGCLL1-202ENST00000308161 TTLL1O95922 423 aa20.23■□□□□ 0.83
HMGCLL1-202ENST00000308161 ADORA2AP29274 412 aa20.23■□□□□ 0.83
HMGCLL1-202ENST00000308161 CCND3P30281 292 aaPredicted RBP20.23■□□□□ 0.83
HMGCLL1-202ENST00000308161 MAP3K21Q5TCX8 1036 aa20.23■□□□□ 0.83
HMGCLL1-202ENST00000308161 MFSD14CQ5VZR4 134 aa20.23■□□□□ 0.83
HMGCLL1-202ENST00000308161 ZNF589Q86UQ0 364 aaPredicted RBP20.23■□□□□ 0.83
HMGCLL1-202ENST00000308161 SHCBP1Q8NEM2 672 aa20.23■□□□□ 0.83
HMGCLL1-202ENST00000308161 NEDD1Q8NHV4 660 aa20.23■□□□□ 0.83
HMGCLL1-202ENST00000308161 NPLOC4Q8TAT6 608 aa20.23■□□□□ 0.83
HMGCLL1-202ENST00000308161 SLF1Q9BQI6 1058 aa20.23■□□□□ 0.83
HMGCLL1-202ENST00000308161 HTATIP2Q9BUP3 242 aa20.23■□□□□ 0.83
HMGCLL1-202ENST00000308161 CRISPLD2Q9H0B8 497 aa20.23■□□□□ 0.83
HMGCLL1-202ENST00000308161 FLRT1Q9NZU1 646 aa20.23■□□□□ 0.83
HMGCLL1-202ENST00000308161 RANBP6O60518 1105 aaKnown RBP20.22■□□□□ 0.83
HMGCLL1-202ENST00000308161 SLC4A3P48751 1232 aa20.22■□□□□ 0.83
HMGCLL1-202ENST00000308161 UBE2Q1Q7Z7E8 422 aa20.22■□□□□ 0.83
HMGCLL1-202ENST00000308161 DIS3LQ8TF46 1054 aaKnown RBP20.22■□□□□ 0.83
HMGCLL1-202ENST00000308161 PAWRQ96IZ0 340 aaKnown RBP20.22■□□□□ 0.83
HMGCLL1-202ENST00000308161 MROH8Q9H579 483 aa20.22■□□□□ 0.83
HMGCLL1-202ENST00000308161 CCDC171Q6TFL3 1326 aa20.21■□□□□ 0.83
HMGCLL1-202ENST00000308161 MYH4Q9Y623 1939 aa20.21■□□□□ 0.83
HMGCLL1-202ENST00000308161 PARP14Q460N5 1801 aa20.21■□□□□ 0.83
HMGCLL1-202ENST00000308161 VWA5AO00534 786 aa20.21■□□□□ 0.83
HMGCLL1-202ENST00000308161 SDSP20132 328 aa20.21■□□□□ 0.83
HMGCLL1-202ENST00000308161 RRP12Q5JTH9 1297 aaKnown RBP20.21■□□□□ 0.83
HMGCLL1-202ENST00000308161 OSBPL3Q9H4L5 887 aa20.21■□□□□ 0.83
HMGCLL1-202ENST00000308161 DIAPH3Q9NSV4 1193 aa20.21■□□□□ 0.83
HMGCLL1-202ENST00000308161 STX8Q9UNK0 236 aa20.21■□□□□ 0.83
HMGCLL1-202ENST00000308161 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.21■□□□□ 0.83
HMGCLL1-202ENST00000308161 CTDP1Q9Y5B0 961 aaPredicted RBP20.21■□□□□ 0.83
HMGCLL1-202ENST00000308161 PLIN4Q96Q06 1357 aa20.2■□□□□ 0.82
HMGCLL1-202ENST00000308161 STRNO43815 780 aa20.2■□□□□ 0.82
HMGCLL1-202ENST00000308161 FGAP02671 866 aa20.2■□□□□ 0.82
HMGCLL1-202ENST00000308161 HSPD1P10809 573 aaKnown RBP20.2■□□□□ 0.82
HMGCLL1-202ENST00000308161 CNGA1P29973 690 aa20.2■□□□□ 0.82
HMGCLL1-202ENST00000308161 CYP2C19P33261 490 aa20.2■□□□□ 0.82
HMGCLL1-202ENST00000308161 STAT3P40763 770 aa20.2■□□□□ 0.82
HMGCLL1-202ENST00000308161 HAND2P61296 217 aa20.2■□□□□ 0.82
HMGCLL1-202ENST00000308161 SLFN13Q68D06 897 aa20.2■□□□□ 0.82
HMGCLL1-202ENST00000308161 KIFC2Q96AC6 838 aa20.2■□□□□ 0.82
HMGCLL1-202ENST00000308161 MTMR7Q9Y216 660 aa20.2■□□□□ 0.82
HMGCLL1-202ENST00000308161 COL11A1P12107 1806 aaPredicted RBP20.19■□□□□ 0.82
HMGCLL1-202ENST00000308161 H0YGN5 161 aa20.19■□□□□ 0.82
HMGCLL1-202ENST00000308161 NMT2O60551 498 aa20.19■□□□□ 0.82
HMGCLL1-202ENST00000308161 SLC25A27O95847 323 aa20.19■□□□□ 0.82
HMGCLL1-202ENST00000308161 HOXC6P09630 235 aa20.19■□□□□ 0.82
HMGCLL1-202ENST00000308161 FCER1AP12319 257 aa20.19■□□□□ 0.82
HMGCLL1-202ENST00000308161 ALX1Q15699 326 aa20.19■□□□□ 0.82
HMGCLL1-202ENST00000308161 CWC27Q6UX04 472 aaKnown RBP20.19■□□□□ 0.82
HMGCLL1-202ENST00000308161 NECAB2Q7Z6G3 386 aa20.19■□□□□ 0.82
HMGCLL1-202ENST00000308161 CPXCR1Q8N123 301 aa20.19■□□□□ 0.82
HMGCLL1-202ENST00000308161 MKL1Q969V6 931 aa20.19■□□□□ 0.82
HMGCLL1-202ENST00000308161 ADAMTS5Q9UNA0 930 aa20.19■□□□□ 0.82
HMGCLL1-202ENST00000308161 TACC3Q9Y6A5 838 aa20.19■□□□□ 0.82
HMGCLL1-202ENST00000308161 COBLO75128 1261 aa20.18■□□□□ 0.82
HMGCLL1-202ENST00000308161 IKQ13123 557 aaPredicted RBP20.18■□□□□ 0.82
HMGCLL1-202ENST00000308161 TICAM2Q86XR7 235 aa20.18■□□□□ 0.82
HMGCLL1-202ENST00000308161 RIOX2Q8IUF8 465 aa20.18■□□□□ 0.82
HMGCLL1-202ENST00000308161 PRPF38AQ8NAV1 312 aaKnown RBP20.18■□□□□ 0.82
HMGCLL1-202ENST00000308161 GMCL1P1Q8NEA9 526 aa20.18■□□□□ 0.82
HMGCLL1-202ENST00000308161 MMP19Q99542 508 aa20.18■□□□□ 0.82
HMGCLL1-202ENST00000308161 SLC5A4Q9NY91 659 aa20.18■□□□□ 0.82
HMGCLL1-202ENST00000308161 ANAPC4Q9UJX5 808 aa20.18■□□□□ 0.82
HMGCLL1-202ENST00000308161 ZNF214Q9UL59 606 aaPredicted RBP20.18■□□□□ 0.82
HMGCLL1-202ENST00000308161 CEP290O15078 2479 aa20.17■□□□□ 0.82
HMGCLL1-202ENST00000308161 BMP3P12645 472 aa20.17■□□□□ 0.82
HMGCLL1-202ENST00000308161 CAPN2P17655 700 aa20.17■□□□□ 0.82
HMGCLL1-202ENST00000308161 MFAP1P55081 439 aaKnown RBP20.17■□□□□ 0.82
HMGCLL1-202ENST00000308161 SNRNP48Q6IEG0 339 aaKnown RBP20.17■□□□□ 0.82
HMGCLL1-202ENST00000308161 ANKLE1Q8NAG6 615 aa20.17■□□□□ 0.82
HMGCLL1-202ENST00000308161 REPS2Q8NFH8 660 aa20.17■□□□□ 0.82
HMGCLL1-202ENST00000308161 OGDHLQ9ULD0 1010 aa20.17■□□□□ 0.82
HMGCLL1-202ENST00000308161 ZBED4O75132 1171 aa20.16■□□□□ 0.82
HMGCLL1-202ENST00000308161 PGK2P07205 417 aa20.16■□□□□ 0.82
HMGCLL1-202ENST00000308161 PDE4AP27815 886 aa20.16■□□□□ 0.82
HMGCLL1-202ENST00000308161 KCTD2Q14681 263 aa20.16■□□□□ 0.82
HMGCLL1-202ENST00000308161 TEX13BQ9BXU2 312 aa20.16■□□□□ 0.82
HMGCLL1-202ENST00000308161 IL17RBQ9NRM6 502 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms