RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 PCNTO95613 3336 aa28.67■■■□□ 2.18
HOXC9-201ENST00000303450 IRX3P78415 501 aaPredicted RBP28.67■■■□□ 2.18
HOXC9-201ENST00000303450 TAF1CQ15572 869 aaPredicted RBP28.67■■■□□ 2.18
HOXC9-201ENST00000303450 CCDC69A6NI79 296 aa28.66■■■□□ 2.18
HOXC9-201ENST00000303450 BMP3P12645 472 aa28.66■■■□□ 2.18
HOXC9-201ENST00000303450 CATSPERGQ6ZRH7 1159 aa28.66■■■□□ 2.18
HOXC9-201ENST00000303450 DCAF4Q8WV16 495 aa28.66■■■□□ 2.18
HOXC9-201ENST00000303450 PARK7Q99497 189 aaKnown RBP28.66■■■□□ 2.18
HOXC9-201ENST00000303450 RNF186Q9NXI6 227 aa28.66■■■□□ 2.18
HOXC9-201ENST00000303450 TRPA1O75762 1119 aa28.65■■■□□ 2.18
HOXC9-201ENST00000303450 Q6ZUG5 572 aa28.65■■■□□ 2.18
HOXC9-201ENST00000303450 CATIPQ7Z7H3 387 aa28.65■■■□□ 2.18
HOXC9-201ENST00000303450 ASCC2Q9H1I8 757 aaPredicted RBP28.65■■■□□ 2.18
HOXC9-201ENST00000303450 CYP2C8P10632 490 aa28.64■■■□□ 2.18
HOXC9-201ENST00000303450 CCDC96Q2M329 555 aa28.64■■■□□ 2.18
HOXC9-201ENST00000303450 ZFYVE28Q9HCC9 887 aa28.64■■■□□ 2.18
HOXC9-201ENST00000303450 WBP1LQ9NX94 342 aa28.64■■■□□ 2.18
HOXC9-201ENST00000303450 CA12O43570 354 aa28.64■■■□□ 2.17
HOXC9-201ENST00000303450 PDHBP11177 359 aa28.64■■■□□ 2.17
HOXC9-201ENST00000303450 RASGRP2Q7LDG7 609 aa28.64■■■□□ 2.17
HOXC9-201ENST00000303450 PDRG1Q9NUG6 133 aa28.64■■■□□ 2.17
HOXC9-201ENST00000303450 FLOT1O75955 427 aa28.63■■■□□ 2.17
HOXC9-201ENST00000303450 KCTD1Q719H9 257 aa28.63■■■□□ 2.17
HOXC9-201ENST00000303450 SGMS1Q86VZ5 419 aa28.63■■■□□ 2.17
HOXC9-201ENST00000303450 SMCR8Q8TEV9 937 aaPredicted RBP28.63■■■□□ 2.17
HOXC9-201ENST00000303450 TBC1D32Q96NH3 1257 aa28.63■■■□□ 2.17
HOXC9-201ENST00000303450 CRHR2Q13324 411 aa28.62■■■□□ 2.17
HOXC9-201ENST00000303450 COG2Q14746 738 aa28.62■■■□□ 2.17
HOXC9-201ENST00000303450 P2RX7Q99572 595 aaKnown RBP28.62■■■□□ 2.17
HOXC9-201ENST00000303450 SAGE1Q9NXZ1 904 aa28.62■■■□□ 2.17
HOXC9-201ENST00000303450 SLC12A7Q9Y666 1083 aa28.62■■■□□ 2.17
HOXC9-201ENST00000303450 TMEM232C9JQI7 657 aa28.61■■■□□ 2.17
HOXC9-201ENST00000303450 SNHG28P0DPA3 235 aa28.61■■■□□ 2.17
HOXC9-201ENST00000303450 SAMD1Q6SPF0 538 aaPredicted RBP28.61■■■□□ 2.17
HOXC9-201ENST00000303450 SYNE3Q6ZMZ3 975 aa28.61■■■□□ 2.17
HOXC9-201ENST00000303450 ZNF654Q8IZM8 581 aa28.61■■■□□ 2.17
HOXC9-201ENST00000303450 FBXL16Q8N461 479 aa28.61■■■□□ 2.17
HOXC9-201ENST00000303450 BRF1Q92994 677 aa28.61■■■□□ 2.17
HOXC9-201ENST00000303450 HOXC10Q9NYD6 342 aa28.61■■■□□ 2.17
HOXC9-201ENST00000303450 FEM1BQ9UK73 627 aa28.61■■■□□ 2.17
HOXC9-201ENST00000303450 FRMPD2Q68DX3 1309 aaPredicted RBP28.61■■■□□ 2.17
HOXC9-201ENST00000303450 TBC1D8O95759 1140 aa28.6■■■□□ 2.17
HOXC9-201ENST00000303450 IKQ13123 557 aaPredicted RBP28.6■■■□□ 2.17
HOXC9-201ENST00000303450 NUP133Q8WUM0 1156 aa28.6■■■□□ 2.17
HOXC9-201ENST00000303450 FBXO28Q9NVF7 368 aa28.6■■■□□ 2.17
HOXC9-201ENST00000303450 DDAH1O94760 285 aa28.59■■■□□ 2.17
HOXC9-201ENST00000303450 PARP1P09874 1014 aaKnown RBP28.59■■■□□ 2.17
HOXC9-201ENST00000303450 NEK4P51957 841 aa28.59■■■□□ 2.17
HOXC9-201ENST00000303450 STAT2P52630 851 aa28.59■■■□□ 2.17
HOXC9-201ENST00000303450 HERVK_113P62684 666 aa28.59■■■□□ 2.17
HOXC9-201ENST00000303450 ZNF543Q08ER8 600 aa28.59■■■□□ 2.17
HOXC9-201ENST00000303450 TROAPQ12815 778 aa28.59■■■□□ 2.17
HOXC9-201ENST00000303450 GPATCH4Q5T3I0 446 aaKnown RBP28.59■■■□□ 2.17
HOXC9-201ENST00000303450 KIF2CQ99661 725 aa28.59■■■□□ 2.17
HOXC9-201ENST00000303450 GPCPD1Q9NPB8 672 aa28.59■■■□□ 2.17
HOXC9-201ENST00000303450 CHURC1Q8WUH1 139 aa28.59■■■□□ 2.17
HOXC9-201ENST00000303450 SLF1Q9BQI6 1058 aa28.59■■■□□ 2.17
HOXC9-201ENST00000303450 MYL10Q9BUA6 226 aa28.59■■■□□ 2.17
HOXC9-201ENST00000303450 CFHR5Q9BXR6 569 aa28.59■■■□□ 2.17
HOXC9-201ENST00000303450 AGXT2Q9BYV1 514 aa28.59■■■□□ 2.17
HOXC9-201ENST00000303450 TLR2O60603 784 aa28.58■■■□□ 2.17
HOXC9-201ENST00000303450 GOLGA8HP0CJ92 632 aa28.58■■■□□ 2.17
HOXC9-201ENST00000303450 DSG3P32926 999 aa28.58■■■□□ 2.17
HOXC9-201ENST00000303450 ASPRV1Q53RT3 343 aa28.58■■■□□ 2.17
HOXC9-201ENST00000303450 PPP1R9AQ9ULJ8 1098 aa28.58■■■□□ 2.17
HOXC9-201ENST00000303450 NAP1L2Q9ULW6 460 aaPredicted RBP28.58■■■□□ 2.17
HOXC9-201ENST00000303450 KLF18A0A0U1RQI7 1052 aa28.57■■■□□ 2.16
HOXC9-201ENST00000303450 SPDYE16A6NNV3 312 aaPredicted RBP28.57■■■□□ 2.16
HOXC9-201ENST00000303450 CALM1P0DP23 149 aa28.57■■■□□ 2.16
HOXC9-201ENST00000303450 CALM2P0DP24 149 aa28.57■■■□□ 2.16
HOXC9-201ENST00000303450 CALM3P0DP25 149 aa28.57■■■□□ 2.16
HOXC9-201ENST00000303450 APOBRQ0VD83 1088 aa28.57■■■□□ 2.16
HOXC9-201ENST00000303450 APOA5Q6Q788 366 aa28.57■■■□□ 2.16
HOXC9-201ENST00000303450 MYPNQ86TC9 1320 aa28.57■■■□□ 2.16
HOXC9-201ENST00000303450 FAM160B2Q86V87 743 aa28.57■■■□□ 2.16
HOXC9-201ENST00000303450 PRPF38AQ8NAV1 312 aaKnown RBP28.57■■■□□ 2.16
HOXC9-201ENST00000303450 GTF3C2Q8WUA4 911 aaPredicted RBP28.57■■■□□ 2.16
HOXC9-201ENST00000303450 KIFC2Q96AC6 838 aa28.57■■■□□ 2.16
HOXC9-201ENST00000303450 BRPF3Q9ULD4 1205 aa28.57■■■□□ 2.16
HOXC9-201ENST00000303450 PLA2G6O60733 806 aa28.56■■■□□ 2.16
HOXC9-201ENST00000303450 GCLCP48506 637 aaPredicted RBP28.56■■■□□ 2.16
HOXC9-201ENST00000303450 TOB2Q14106 344 aaPredicted RBP28.56■■■□□ 2.16
HOXC9-201ENST00000303450 GRM4Q14833 912 aa28.56■■■□□ 2.16
HOXC9-201ENST00000303450 TTBK2Q6IQ55 1244 aa28.56■■■□□ 2.16
HOXC9-201ENST00000303450 MICU3Q86XE3 530 aa28.56■■■□□ 2.16
HOXC9-201ENST00000303450 CTCFLQ8NI51 663 aaPredicted RBP28.56■■■□□ 2.16
HOXC9-201ENST00000303450 MAP3K14Q99558 947 aa28.56■■■□□ 2.16
HOXC9-201ENST00000303450 R3HDMLQ9H3Y0 253 aa28.56■■■□□ 2.16
HOXC9-201ENST00000303450 RLFQ13129 1914 aa28.55■■■□□ 2.16
HOXC9-201ENST00000303450 RAB11FIP4Q86YS3 637 aa28.55■■■□□ 2.16
HOXC9-201ENST00000303450 ATG4CQ96DT6 458 aa28.55■■■□□ 2.16
HOXC9-201ENST00000303450 ALDH8A1Q9H2A2 487 aaPredicted RBP28.55■■■□□ 2.16
HOXC9-201ENST00000303450 CPA4Q9UI42 421 aa28.55■■■□□ 2.16
HOXC9-201ENST00000303450 PARP14Q460N5 1801 aa28.55■■■□□ 2.16
HOXC9-201ENST00000303450 ZBTB43O43298 467 aa28.54■■■□□ 2.16
HOXC9-201ENST00000303450 RXRAP19793 462 aa28.54■■■□□ 2.16
HOXC9-201ENST00000303450 KIF5BP33176 963 aa28.54■■■□□ 2.16
HOXC9-201ENST00000303450 RABEP1Q15276 862 aa28.54■■■□□ 2.16
HOXC9-201ENST00000303450 LBX2Q6XYB7 198 aa28.54■■■□□ 2.16
HOXC9-201ENST00000303450 MAD2L2Q9UI95 211 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms