RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 DPY19L2Q6NUT2 758 aa14.99□□□□□ -0.01
CCDC7-202ENST00000302316 SHISA4Q96DD7 197 aa14.99□□□□□ -0.01
CCDC7-202ENST00000302316 GPCPD1Q9NPB8 672 aa14.99□□□□□ -0.01
CCDC7-202ENST00000302316 BAZ2BQ9UIF8 2168 aaKnown RBP14.98□□□□□ -0.01
CCDC7-202ENST00000302316 GADD45BO75293 160 aaPredicted RBP14.98□□□□□ -0.01
CCDC7-202ENST00000302316 U2AF2P26368 475 aaKnown RBP eCLIP14.98□□□□□ -0.01
CCDC7-202ENST00000302316 SMARCA1P28370 1054 aa14.98□□□□□ -0.01
CCDC7-202ENST00000302316 KLHL40Q2TBA0 621 aa14.98□□□□□ -0.01
CCDC7-202ENST00000302316 GPATCH4Q5T3I0 446 aaKnown RBP14.98□□□□□ -0.01
CCDC7-202ENST00000302316 NBPF12Q5TAG4 269 aaPredicted RBP14.98□□□□□ -0.01
CCDC7-202ENST00000302316 SLFN13Q68D06 897 aa14.98□□□□□ -0.01
CCDC7-202ENST00000302316 ATL3Q6DD88 541 aa14.98□□□□□ -0.01
CCDC7-202ENST00000302316 HOMER1Q86YM7 354 aa14.98□□□□□ -0.01
CCDC7-202ENST00000302316 DCAF4Q8WV16 495 aa14.98□□□□□ -0.01
CCDC7-202ENST00000302316 RRP36Q96EU6 259 aaKnown RBP14.98□□□□□ -0.01
CCDC7-202ENST00000302316 PHF20Q9BVI0 1012 aa14.98□□□□□ -0.01
CCDC7-202ENST00000302316 UBA5Q9GZZ9 404 aa14.98□□□□□ -0.01
CCDC7-202ENST00000302316 ARHGEF10LQ9HCE6 1279 aa14.98□□□□□ -0.01
CCDC7-202ENST00000302316 BTBD18B2RXH4 712 aa14.98□□□□□ -0.01
CCDC7-202ENST00000302316 CEBPZQ03701 1054 aaKnown RBP14.98□□□□□ -0.01
CCDC7-202ENST00000302316 KCTD1Q719H9 257 aa14.98□□□□□ -0.01
CCDC7-202ENST00000302316 GMCL1P1Q8NEA9 526 aa14.98□□□□□ -0.01
CCDC7-202ENST00000302316 LEO1Q8WVC0 666 aaPredicted RBP14.98□□□□□ -0.01
CCDC7-202ENST00000302316 GPKOWQ92917 476 aaPredicted RBP eCLIP14.98□□□□□ -0.01
CCDC7-202ENST00000302316 USP28Q96RU2 1077 aa14.98□□□□□ -0.01
CCDC7-202ENST00000302316 FTOQ9C0B1 505 aaKnown RBP eCLIP14.98□□□□□ -0.01
CCDC7-202ENST00000302316 FOXP1Q9H334 677 aaPredicted RBP14.98□□□□□ -0.01
CCDC7-202ENST00000302316 VAT1LQ9HCJ6 419 aa14.98□□□□□ -0.01
CCDC7-202ENST00000302316 BRMS1Q9HCU9 246 aa14.98□□□□□ -0.01
CCDC7-202ENST00000302316 SEC63Q9UGP8 760 aaKnown RBP14.98□□□□□ -0.01
CCDC7-202ENST00000302316 ELP1O95163 1332 aa14.97□□□□□ -0.01
CCDC7-202ENST00000302316 ZC3H4Q9UPT8 1303 aaKnown RBP14.97□□□□□ -0.01
CCDC7-202ENST00000302316 PHF20L1A8MW92 1017 aa14.97□□□□□ -0.01
CCDC7-202ENST00000302316 MBD3O95983 291 aa14.97□□□□□ -0.01
CCDC7-202ENST00000302316 ASNSP08243 561 aa14.97□□□□□ -0.01
CCDC7-202ENST00000302316 VEGFAP15692 232 aaPredicted RBP14.97□□□□□ -0.01
CCDC7-202ENST00000302316 KRT2P35908 639 aa14.97□□□□□ -0.01
CCDC7-202ENST00000302316 SLC1A4P43007 532 aa14.97□□□□□ -0.01
CCDC7-202ENST00000302316 HEATR3Q7Z4Q2 680 aa14.97□□□□□ -0.01
CCDC7-202ENST00000302316 NOSTRINQ8IVI9 506 aa14.97□□□□□ -0.01
CCDC7-202ENST00000302316 GPT2Q8TD30 523 aa14.97□□□□□ -0.01
CCDC7-202ENST00000302316 HOOK2Q96ED9 719 aa14.97□□□□□ -0.01
CCDC7-202ENST00000302316 RIOX1Q9H6W3 641 aa14.97□□□□□ -0.01
CCDC7-202ENST00000302316 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.97□□□□□ -0.01
CCDC7-202ENST00000302316 SYNPO2Q9UMS6 1093 aa14.97□□□□□ -0.01
CCDC7-202ENST00000302316 PITPNM2Q9BZ72 1349 aa14.97□□□□□ -0.01
CCDC7-202ENST00000302316 A0A1W2PRG0 241 aa14.96□□□□□ -0.01
CCDC7-202ENST00000302316 F5H6K3 240 aa14.96□□□□□ -0.01
CCDC7-202ENST00000302316 NDUFB10O96000 172 aa14.96□□□□□ -0.01
CCDC7-202ENST00000302316 NLRP5P59047 1200 aa14.96□□□□□ -0.01
CCDC7-202ENST00000302316 UBE2HP62256 183 aa14.96□□□□□ -0.01
CCDC7-202ENST00000302316 KLRC3Q07444 240 aa14.96□□□□□ -0.01
CCDC7-202ENST00000302316 NR5A1Q13285 461 aa14.96□□□□□ -0.01
CCDC7-202ENST00000302316 TPRNQ4KMQ1 711 aa14.96□□□□□ -0.01
CCDC7-202ENST00000302316 DCAF15Q66K64 600 aa14.96□□□□□ -0.01
CCDC7-202ENST00000302316 PIGSQ96S52 555 aa14.96□□□□□ -0.01
CCDC7-202ENST00000302316 PPP2R3BQ9Y5P8 575 aa14.96□□□□□ -0.01
CCDC7-202ENST00000302316 ECE1P42892 770 aa14.96□□□□□ -0.01
CCDC7-202ENST00000302316 PRAMEF18Q5VWM3 479 aa14.96□□□□□ -0.01
CCDC7-202ENST00000302316 WWC2Q6AWC2 1192 aa14.96□□□□□ -0.01
CCDC7-202ENST00000302316 TTBK2Q6IQ55 1244 aa14.96□□□□□ -0.01
CCDC7-202ENST00000302316 OXER1Q8TDS5 423 aa14.96□□□□□ -0.01
CCDC7-202ENST00000302316 L3MBTL3Q96JM7 780 aaPredicted RBP14.96□□□□□ -0.01
CCDC7-202ENST00000302316 SH3GLB2Q9NR46 395 aa14.96□□□□□ -0.01
CCDC7-202ENST00000302316 ATAD5Q96QE3 1844 aa14.96□□□□□ -0.02
CCDC7-202ENST00000302316 CCDC148Q8NFR7 591 aa14.95□□□□□ -0.02
CCDC7-202ENST00000302316 ACER1Q8TDN7 264 aa14.95□□□□□ -0.02
CCDC7-202ENST00000302316 GMCL1Q96IK5 515 aa14.95□□□□□ -0.02
CCDC7-202ENST00000302316 ZNF341Q9BYN7 854 aa14.95□□□□□ -0.02
CCDC7-202ENST00000302316 GZF1Q9H116 711 aaPredicted RBP14.95□□□□□ -0.02
CCDC7-202ENST00000302316 SH2D4AQ9H788 454 aa14.95□□□□□ -0.02
CCDC7-202ENST00000302316 BARHL2Q9NY43 387 aa14.95□□□□□ -0.02
CCDC7-202ENST00000302316 TMX2Q9Y320 296 aa14.95□□□□□ -0.02
CCDC7-202ENST00000302316 CALML3P27482 149 aa14.95□□□□□ -0.02
CCDC7-202ENST00000302316 SLC16A2P36021 539 aa14.95□□□□□ -0.02
CCDC7-202ENST00000302316 ADGRF4Q8IZF3 695 aa14.95□□□□□ -0.02
CCDC7-202ENST00000302316 GOPCQ9HD26 462 aa14.95□□□□□ -0.02
CCDC7-202ENST00000302316 RTEL1Q9NZ71 1219 aa14.95□□□□□ -0.02
CCDC7-202ENST00000302316 STXBP3O00186 592 aa14.94□□□□□ -0.02
CCDC7-202ENST00000302316 CTNND1O60716 968 aaKnown RBP14.94□□□□□ -0.02
CCDC7-202ENST00000302316 NPY5RQ15761 445 aa14.94□□□□□ -0.02
CCDC7-202ENST00000302316 CCDC84Q86UT8 332 aaPredicted RBP14.94□□□□□ -0.02
CCDC7-202ENST00000302316 DCPSQ96C86 337 aaKnown RBP14.94□□□□□ -0.02
CCDC7-202ENST00000302316 NUP88Q99567 741 aaPredicted RBP14.94□□□□□ -0.02
CCDC7-202ENST00000302316 JMJD4Q9H9V9 463 aa14.94□□□□□ -0.02
CCDC7-202ENST00000302316 POLR3EQ9NVU0 708 aa14.94□□□□□ -0.02
CCDC7-202ENST00000302316 CLIC4Q9Y696 253 aa14.94□□□□□ -0.02
CCDC7-202ENST00000302316 GOLGA6L4A6NEF3 574 aa14.93□□□□□ -0.02
CCDC7-202ENST00000302316 GLTPD2A6NH11 291 aa14.93□□□□□ -0.02
CCDC7-202ENST00000302316 BMP3P12645 472 aa14.93□□□□□ -0.02
CCDC7-202ENST00000302316 NAPAP54920 295 aa14.93□□□□□ -0.02
CCDC7-202ENST00000302316 STK38Q15208 465 aa14.93□□□□□ -0.02
CCDC7-202ENST00000302316 TYW1BQ6NUM6 668 aa14.93□□□□□ -0.02
CCDC7-202ENST00000302316 CAVIN1Q6NZI2 390 aaKnown RBP14.93□□□□□ -0.02
CCDC7-202ENST00000302316 SPICE1Q8N0Z3 855 aa14.93□□□□□ -0.02
CCDC7-202ENST00000302316 CCDC12Q8WUD4 166 aaPredicted RBP14.93□□□□□ -0.02
CCDC7-202ENST00000302316 GINM1Q9NU53 330 aa14.93□□□□□ -0.02
CCDC7-202ENST00000302316 RCOR1Q9UKL0 485 aa14.93□□□□□ -0.02
CCDC7-202ENST00000302316 hCG_1984214I3L0E3 225 aa14.93□□□□□ -0.02
CCDC7-202ENST00000302316 INPP5BP32019 993 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms