RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 TMEM179Q6ZVK1 233 aa7.9□□□□□ -1.14
ITGB1-201ENST00000302278 XPNPEP3Q9NQH7 507 aa7.9□□□□□ -1.14
ITGB1-201ENST00000302278 SYNRGQ9UMZ2 1314 aa7.9□□□□□ -1.14
ITGB1-201ENST00000302278 SIP14410 1827 aa7.9□□□□□ -1.14
ITGB1-201ENST00000302278 RARBP10826 455 aa7.9□□□□□ -1.14
ITGB1-201ENST00000302278 DYNLL1P63167 89 aaKnown RBP7.9□□□□□ -1.14
ITGB1-201ENST00000302278 PSRC1Q6PGN9 363 aaPredicted RBP7.9□□□□□ -1.14
ITGB1-201ENST00000302278 DPP9Q86TI2 863 aa7.9□□□□□ -1.14
ITGB1-201ENST00000302278 TINF2Q9BSI4 451 aa7.9□□□□□ -1.14
ITGB1-201ENST00000302278 SYNPO2Q9UMS6 1093 aa7.9□□□□□ -1.14
ITGB1-201ENST00000302278 ZAP70P43403 619 aa7.9□□□□□ -1.15
ITGB1-201ENST00000302278 RAB30Q15771 203 aa7.9□□□□□ -1.15
ITGB1-201ENST00000302278 TTC39AQ5SRH9 613 aa7.9□□□□□ -1.15
ITGB1-201ENST00000302278 NEUROD6Q96NK8 337 aa7.9□□□□□ -1.15
ITGB1-201ENST00000302278 DBNDD2Q9BQY9 259 aa7.9□□□□□ -1.15
ITGB1-201ENST00000302278 PBX4Q9BYU1 374 aa7.9□□□□□ -1.15
ITGB1-201ENST00000302278 CABP5Q9NP86 173 aa7.9□□□□□ -1.15
ITGB1-201ENST00000302278 TCRBV5S4A2TA0A5A2 114 aa7.89□□□□□ -1.15
ITGB1-201ENST00000302278 FCER1AP12319 257 aa7.89□□□□□ -1.15
ITGB1-201ENST00000302278 CNGA1P29973 690 aa7.89□□□□□ -1.15
ITGB1-201ENST00000302278 ACLYP53396 1101 aa7.89□□□□□ -1.15
ITGB1-201ENST00000302278 ADAMTS19Q8TE59 1207 aa7.89□□□□□ -1.15
ITGB1-201ENST00000302278 FEZ1Q99689 392 aa7.89□□□□□ -1.15
ITGB1-201ENST00000302278 C1QTNF1Q9BXJ1 281 aa7.89□□□□□ -1.15
ITGB1-201ENST00000302278 VCPKMTQ9H867 229 aa7.89□□□□□ -1.15
ITGB1-201ENST00000302278 DBNLQ9UJU6 430 aaKnown RBP7.89□□□□□ -1.15
ITGB1-201ENST00000302278 SALL2Q9Y467 1007 aaPredicted RBP7.89□□□□□ -1.15
ITGB1-201ENST00000302278 PLCD1P51178 756 aa7.89□□□□□ -1.15
ITGB1-201ENST00000302278 GJA9P57773 515 aa7.89□□□□□ -1.15
ITGB1-201ENST00000302278 G3BP1Q13283 466 aaKnown RBP eCLIP7.89□□□□□ -1.154e-7■□□□□ 8.7
ITGB1-201ENST00000302278 TMEM132BQ14DG7 1078 aa7.89□□□□□ -1.15
ITGB1-201ENST00000302278 FAM126BQ8IXS8 530 aa7.89□□□□□ -1.15
ITGB1-201ENST00000302278 NUP133Q8WUM0 1156 aa7.89□□□□□ -1.15
ITGB1-201ENST00000302278 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.89□□□□□ -1.15
ITGB1-201ENST00000302278 KATNBL1Q9H079 304 aa7.89□□□□□ -1.15
ITGB1-201ENST00000302278 CWC22Q9HCG8 908 aaKnown RBP7.89□□□□□ -1.15
ITGB1-201ENST00000302278 SAP30BPQ9UHR5 308 aaKnown RBP7.89□□□□□ -1.15
ITGB1-201ENST00000302278 ZNF214Q9UL59 606 aaPredicted RBP7.89□□□□□ -1.15
ITGB1-201ENST00000302278 MCM3APO60318 1980 aa7.89□□□□□ -1.15
ITGB1-201ENST00000302278 TRANK1O15050 2925 aa7.89□□□□□ -1.15
ITGB1-201ENST00000302278 CTAGE5O15320 804 aa7.89□□□□□ -1.15
ITGB1-201ENST00000302278 DUSP11O75319 330 aaKnown RBP7.89□□□□□ -1.15
ITGB1-201ENST00000302278 BMP1P13497 986 aa7.89□□□□□ -1.15
ITGB1-201ENST00000302278 ATP8B2P98198 1209 aa7.89□□□□□ -1.15
ITGB1-201ENST00000302278 SH2D4AQ9H788 454 aa7.89□□□□□ -1.15
ITGB1-201ENST00000302278 PRDM5Q9NQX1 630 aaPredicted RBP7.89□□□□□ -1.15
ITGB1-201ENST00000302278 CYP7A1P22680 504 aa7.88□□□□□ -1.15
ITGB1-201ENST00000302278 ADGRE1Q14246 886 aa7.88□□□□□ -1.15
ITGB1-201ENST00000302278 SEPT2Q15019 361 aa7.88□□□□□ -1.15
ITGB1-201ENST00000302278 GORABQ5T7V8 394 aa7.88□□□□□ -1.15
ITGB1-201ENST00000302278 GAS2L1Q99501 681 aaPredicted RBP7.88□□□□□ -1.15
ITGB1-201ENST00000302278 VCANP13611 3396 aa7.88□□□□□ -1.15
ITGB1-201ENST00000302278 REV3LO60673 3130 aa7.88□□□□□ -1.15
ITGB1-201ENST00000302278 RAG1P15918 1043 aa7.88□□□□□ -1.15
ITGB1-201ENST00000302278 SLC44A5Q8NCS7 719 aa7.88□□□□□ -1.15
ITGB1-201ENST00000302278 FAM122AQ96E09 287 aa7.88□□□□□ -1.15
ITGB1-201ENST00000302278 FGD4Q96M96 766 aa7.88□□□□□ -1.15
ITGB1-201ENST00000302278 IL23AQ9NPF7 189 aa7.88□□□□□ -1.15
ITGB1-201ENST00000302278 DCDC2CA8MYV0 355 aa7.88□□□□□ -1.15
ITGB1-201ENST00000302278 RAB3GAP1Q15042 981 aa7.88□□□□□ -1.15
ITGB1-201ENST00000302278 VWCEQ96DN2 955 aa7.88□□□□□ -1.15
ITGB1-201ENST00000302278 CCDC17Q96LX7 622 aa7.88□□□□□ -1.15
ITGB1-201ENST00000302278 MMP19Q99542 508 aa7.88□□□□□ -1.15
ITGB1-201ENST00000302278 TMEM39AQ9NV64 488 aa7.88□□□□□ -1.15
ITGB1-201ENST00000302278 A0A0U1RQG5 324 aaPredicted RBP7.87□□□□□ -1.15
ITGB1-201ENST00000302278 SNAI1O95863 264 aaPredicted RBP7.87□□□□□ -1.15
ITGB1-201ENST00000302278 TRIM27P14373 513 aa7.87□□□□□ -1.15
ITGB1-201ENST00000302278 MAP3K12Q12852 859 aa7.87□□□□□ -1.15
ITGB1-201ENST00000302278 UHRF1Q96T88 793 aaPredicted RBP7.87□□□□□ -1.15
ITGB1-201ENST00000302278 PPP1R9AQ9ULJ8 1098 aa7.87□□□□□ -1.15
ITGB1-201ENST00000302278 RALGAPA2Q2PPJ7 1873 aa7.87□□□□□ -1.15
ITGB1-201ENST00000302278 ARVCFO00192 962 aa7.87□□□□□ -1.15
ITGB1-201ENST00000302278 VWA5AO00534 786 aa7.87□□□□□ -1.15
ITGB1-201ENST00000302278 ERC2O15083 957 aa7.87□□□□□ -1.15
ITGB1-201ENST00000302278 USP5P45974 858 aa7.87□□□□□ -1.15
ITGB1-201ENST00000302278 PRAMEF19Q5SWL8 479 aa7.87□□□□□ -1.15
ITGB1-201ENST00000302278 TMEM199Q8N511 208 aa7.87□□□□□ -1.15
ITGB1-201ENST00000302278 ATG4CQ96DT6 458 aa7.87□□□□□ -1.15
ITGB1-201ENST00000302278 NDUFB9Q9Y6M9 179 aa7.87□□□□□ -1.15
ITGB1-201ENST00000302278 SCN10AQ9Y5Y9 1956 aa7.87□□□□□ -1.15
ITGB1-201ENST00000302278 ATG2AQ2TAZ0 1938 aa7.87□□□□□ -1.15
ITGB1-201ENST00000302278 TTF1Q15361 905 aaPredicted RBP7.86□□□□□ -1.15
ITGB1-201ENST00000302278 C16orf86Q6ZW13 317 aa7.86□□□□□ -1.15
ITGB1-201ENST00000302278 PCSK9Q8NBP7 692 aaKnown RBP7.86□□□□□ -1.15
ITGB1-201ENST00000302278 ARHGEF10LQ9HCE6 1279 aa7.86□□□□□ -1.15
ITGB1-201ENST00000302278 FAM184BQ9ULE4 1060 aa7.86□□□□□ -1.15
ITGB1-201ENST00000302278 PCDHA11Q9Y5I1 949 aa7.86□□□□□ -1.15
ITGB1-201ENST00000302278 PLIN4Q96Q06 1357 aa7.86□□□□□ -1.15
ITGB1-201ENST00000302278 TAL1P17542 331 aaPredicted RBP7.86□□□□□ -1.15
ITGB1-201ENST00000302278 OAZ1P54368 228 aa7.86□□□□□ -1.15
ITGB1-201ENST00000302278 ZYXQ15942 572 aaKnown RBP7.86□□□□□ -1.15
ITGB1-201ENST00000302278 CCDC129Q6ZRS4 1044 aa7.86□□□□□ -1.15
ITGB1-201ENST00000302278 CDCA7LQ96GN5 454 aa7.86□□□□□ -1.15
ITGB1-201ENST00000302278 DCP1AQ9NPI6 582 aaPredicted RBP7.86□□□□□ -1.15
ITGB1-201ENST00000302278 STARD7Q9NQZ5 370 aa7.86□□□□□ -1.15
ITGB1-201ENST00000302278 EAF2Q96CJ1 260 aaPredicted RBP7.86□□□□□ -1.15
ITGB1-201ENST00000302278 TLR7Q9NYK1 1049 aaKnown RBP7.86□□□□□ -1.15
ITGB1-201ENST00000302278 Q9Y3F1 56 aa7.86□□□□□ -1.15
ITGB1-201ENST00000302278 IPO8O15397 1037 aaKnown RBP7.85□□□□□ -1.15
ITGB1-201ENST00000302278 GPR37L1O60883 481 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms