RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 FAM237AA0A1B0GTK4 181 aa13.8□□□□□ -0.2
TPM3-202ENST00000302206 NR1I2O75469 434 aa13.8□□□□□ -0.2
TPM3-202ENST00000302206 TTLL1O95922 423 aa13.8□□□□□ -0.2
TPM3-202ENST00000302206 BMP15O95972 392 aa13.8□□□□□ -0.2
TPM3-202ENST00000302206 PARP1P09874 1014 aaKnown RBP13.8□□□□□ -0.2
TPM3-202ENST00000302206 SNHG28P0DPA3 235 aa13.8□□□□□ -0.2
TPM3-202ENST00000302206 AKR1B1P15121 316 aa13.8□□□□□ -0.2
TPM3-202ENST00000302206 CMA1P23946 247 aa13.8□□□□□ -0.2
TPM3-202ENST00000302206 UVSSAQ2YD98 709 aa13.8□□□□□ -0.2
TPM3-202ENST00000302206 AXDND1Q5T1B0 1012 aaPredicted RBP13.8□□□□□ -0.2
TPM3-202ENST00000302206 FKBP1CQ5VVH2 108 aa13.8□□□□□ -0.2
TPM3-202ENST00000302206 CHADLQ6NUI6 762 aa13.8□□□□□ -0.2
TPM3-202ENST00000302206 FSIP1Q8NA03 581 aa13.8□□□□□ -0.2
TPM3-202ENST00000302206 SHISA4Q96DD7 197 aa13.8□□□□□ -0.2
TPM3-202ENST00000302206 ZNF277Q9NRM2 450 aaPredicted RBP13.8□□□□□ -0.2
TPM3-202ENST00000302206 VPS54Q9P1Q0 977 aa13.8□□□□□ -0.2
TPM3-202ENST00000302206 LTBP3Q9NS15 1303 aa13.8□□□□□ -0.2
TPM3-202ENST00000302206 CNTNAP1P78357 1384 aa13.8□□□□□ -0.2
TPM3-202ENST00000302206 DICER1Q9UPY3 1922 aaKnown RBP13.8□□□□□ -0.2
TPM3-202ENST00000302206 POTECB2RU33 542 aa13.79□□□□□ -0.2
TPM3-202ENST00000302206 NFKBIEO00221 500 aa13.79□□□□□ -0.2
TPM3-202ENST00000302206 PSMD14O00487 310 aa13.79□□□□□ -0.2
TPM3-202ENST00000302206 CUTAO60888 179 aa13.79□□□□□ -0.2
TPM3-202ENST00000302206 CCDC192P0DO97 292 aa13.79□□□□□ -0.2
TPM3-202ENST00000302206 TRAPPC10P48553 1259 aa13.79□□□□□ -0.2
TPM3-202ENST00000302206 TOB1P50616 345 aaPredicted RBP13.79□□□□□ -0.2
TPM3-202ENST00000302206 SNW1Q13573 536 aaKnown RBP13.79□□□□□ -0.2
TPM3-202ENST00000302206 NPY5RQ15761 445 aa13.79□□□□□ -0.2
TPM3-202ENST00000302206 ASPRV1Q53RT3 343 aa13.79□□□□□ -0.2
TPM3-202ENST00000302206 TATDN1Q6P1N9 297 aa13.79□□□□□ -0.2
TPM3-202ENST00000302206 STAG2Q8N3U4 1231 aa13.79□□□□□ -0.2
TPM3-202ENST00000302206 DAGLBQ8NCG7 672 aa13.79□□□□□ -0.2
TPM3-202ENST00000302206 CCDC148Q8NFR7 591 aa13.79□□□□□ -0.2
TPM3-202ENST00000302206 ANP32BQ92688 251 aaKnown RBP13.79□□□□□ -0.2
TPM3-202ENST00000302206 TNFRSF25Q93038 417 aa13.79□□□□□ -0.2
TPM3-202ENST00000302206 GOLPH3LQ9H4A5 285 aa13.79□□□□□ -0.2
TPM3-202ENST00000302206 TMOD2Q9NZR1 351 aa13.79□□□□□ -0.2
TPM3-202ENST00000302206 NOL7Q9UMY1 257 aaKnown RBP13.79□□□□□ -0.2
TPM3-202ENST00000302206 SPDYE2BA6NHP3 402 aa13.78□□□□□ -0.2
TPM3-202ENST00000302206 KLRF2D3W0D1 207 aa13.78□□□□□ -0.2
TPM3-202ENST00000302206 hCG_1984214I3L0E3 225 aa13.78□□□□□ -0.2
TPM3-202ENST00000302206 KINO60870 393 aaKnown RBP13.78□□□□□ -0.2
TPM3-202ENST00000302206 SPDYE6P0CI01 402 aa13.78□□□□□ -0.2
TPM3-202ENST00000302206 NR5A1Q13285 461 aa13.78□□□□□ -0.2
TPM3-202ENST00000302206 TPRNQ4KMQ1 711 aa13.78□□□□□ -0.2
TPM3-202ENST00000302206 SH3BP5LQ7L8J4 393 aa13.78□□□□□ -0.2
TPM3-202ENST00000302206 ZFPM1Q8IX07 1006 aa13.78□□□□□ -0.2
TPM3-202ENST00000302206 FMR1NBQ8N0W7 255 aaPredicted RBP13.78□□□□□ -0.2
TPM3-202ENST00000302206 OGFOD1Q8N543 542 aa13.78□□□□□ -0.2
TPM3-202ENST00000302206 ZNF713Q8N859 430 aaPredicted RBP13.78□□□□□ -0.2
TPM3-202ENST00000302206 OXER1Q8TDS5 423 aa13.78□□□□□ -0.2
TPM3-202ENST00000302206 PRMT6Q96LA8 375 aaPredicted RBP13.78□□□□□ -0.2
TPM3-202ENST00000302206 TIGD1Q96MW7 591 aa13.78□□□□□ -0.2
TPM3-202ENST00000302206 TAOK3Q9H2K8 898 aa13.78□□□□□ -0.2
TPM3-202ENST00000302206 TDRD3Q9H7E2 651 aaKnown RBP13.78□□□□□ -0.2
TPM3-202ENST00000302206 PCDHAC2Q9Y5I4 1007 aa13.78□□□□□ -0.2
TPM3-202ENST00000302206 DDTLA6NHG4 134 aaPredicted RBP13.77□□□□□ -0.21
TPM3-202ENST00000302206 RAD17O75943 681 aa13.77□□□□□ -0.21
TPM3-202ENST00000302206 CAVIN2O95810 425 aa13.77□□□□□ -0.21
TPM3-202ENST00000302206 PDHBP11177 359 aa13.77□□□□□ -0.21
TPM3-202ENST00000302206 NLRP5P59047 1200 aa13.77□□□□□ -0.21
TPM3-202ENST00000302206 CCDC173Q0VFZ6 552 aa13.77□□□□□ -0.21
TPM3-202ENST00000302206 DLGAP5Q15398 846 aa13.77□□□□□ -0.21
TPM3-202ENST00000302206 SLC35G1Q2M3R5 365 aa13.77□□□□□ -0.21
TPM3-202ENST00000302206 ZNF579Q8NAF0 562 aaKnown RBP13.77□□□□□ -0.21
TPM3-202ENST00000302206 CCDC12Q8WUD4 166 aaPredicted RBP13.77□□□□□ -0.21
TPM3-202ENST00000302206 MKL1Q969V6 931 aa13.77□□□□□ -0.21
TPM3-202ENST00000302206 ZBED3Q96IU2 234 aaPredicted RBP13.77□□□□□ -0.21
TPM3-202ENST00000302206 PPP1R9BQ96SB3 815 aa13.77□□□□□ -0.21
TPM3-202ENST00000302206 TRIM34Q9BYJ4 488 aa13.77□□□□□ -0.21
TPM3-202ENST00000302206 PANK2Q9BZ23 570 aa13.77□□□□□ -0.21
TPM3-202ENST00000302206 RIOX1Q9H6W3 641 aa13.77□□□□□ -0.21
TPM3-202ENST00000302206 DNAJC18Q9H819 358 aa13.77□□□□□ -0.21
TPM3-202ENST00000302206 BARHL2Q9NY43 387 aa13.77□□□□□ -0.21
TPM3-202ENST00000302206 NYAP2Q9P242 653 aa13.77□□□□□ -0.21
TPM3-202ENST00000302206 HERC5Q9UII4 1024 aaKnown RBP13.77□□□□□ -0.21
TPM3-202ENST00000302206 SYNPO2Q9UMS6 1093 aa13.77□□□□□ -0.21
TPM3-202ENST00000302206 hCG_1642624A0A1W2PR95 340 aa13.76□□□□□ -0.21
TPM3-202ENST00000302206 TRIM75PA6NK02 468 aa13.76□□□□□ -0.21
TPM3-202ENST00000302206 CYTH3O43739 400 aa13.76□□□□□ -0.21
TPM3-202ENST00000302206 PTPREP23469 700 aa13.76□□□□□ -0.21
TPM3-202ENST00000302206 TCP10Q12799 353 aa13.76□□□□□ -0.21
TPM3-202ENST00000302206 TNIP1Q15025 636 aa13.76□□□□□ -0.21
TPM3-202ENST00000302206 SPDYE2Q495Y8 402 aa13.76□□□□□ -0.21
TPM3-202ENST00000302206 RESP18Q5W5W9 173 aa13.76□□□□□ -0.21
TPM3-202ENST00000302206 CIAPIN1Q6FI81 312 aa13.76□□□□□ -0.21
TPM3-202ENST00000302206 BLIDQ8IZY5 108 aa13.76□□□□□ -0.21
TPM3-202ENST00000302206 KRI1Q8N9T8 703 aaKnown RBP13.76□□□□□ -0.21
TPM3-202ENST00000302206 FAM151AQ8WW52 585 aa13.76□□□□□ -0.21
TPM3-202ENST00000302206 RRP36Q96EU6 259 aaKnown RBP13.76□□□□□ -0.21
TPM3-202ENST00000302206 ABHD8Q96I13 439 aa13.76□□□□□ -0.21
TPM3-202ENST00000302206 KANSL2Q9H9L4 492 aa13.76□□□□□ -0.21
TPM3-202ENST00000302206 CABP5Q9NP86 173 aa13.76□□□□□ -0.21
TPM3-202ENST00000302206 ZNF70Q9UC06 446 aaPredicted RBP13.76□□□□□ -0.21
TPM3-202ENST00000302206 PCDHA4Q9UN74 947 aa13.76□□□□□ -0.21
TPM3-202ENST00000302206 HPSEQ9Y251 543 aa13.76□□□□□ -0.21
TPM3-202ENST00000302206 ESYT2A0FGR8 921 aa13.75□□□□□ -0.21
TPM3-202ENST00000302206 USP17L5A8MUK1 530 aa13.75□□□□□ -0.21
TPM3-202ENST00000302206 STXBP3O00186 592 aa13.75□□□□□ -0.21
TPM3-202ENST00000302206 POTEIP0CG38 1075 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms