RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 TUBBP07437 444 aa16.46■□□□□ 0.23
COL6A2-201ENST00000300527 XBP1P17861 261 aa16.46■□□□□ 0.23
COL6A2-201ENST00000300527 TUBB4BP68371 445 aa16.46■□□□□ 0.23
COL6A2-201ENST00000300527 SLC4A8Q2Y0W8 1093 aa16.46■□□□□ 0.23
COL6A2-201ENST00000300527 AKNAD1Q5T1N1 836 aa16.46■□□□□ 0.23
COL6A2-201ENST00000300527 FANCBQ8NB91 859 aa16.46■□□□□ 0.23
COL6A2-201ENST00000300527 STRBPQ96SI9 672 aaKnown RBP16.46■□□□□ 0.23
COL6A2-201ENST00000300527 GREM2Q9H772 168 aa16.46■□□□□ 0.23
COL6A2-201ENST00000300527 MAGEC2Q9UBF1 373 aaPredicted RBP16.46■□□□□ 0.23
COL6A2-201ENST00000300527 A0A0G2JS52 829 aa16.46■□□□□ 0.22
COL6A2-201ENST00000300527 B4DLN1 442 aa16.46■□□□□ 0.22
COL6A2-201ENST00000300527 KRT86O43790 486 aa16.46■□□□□ 0.22
COL6A2-201ENST00000300527 ITGA6P23229 1130 aa16.46■□□□□ 0.22
COL6A2-201ENST00000300527 KCTD19Q17RG1 926 aaPredicted RBP16.46■□□□□ 0.22
COL6A2-201ENST00000300527 CCDC181Q5TID7 509 aa16.46■□□□□ 0.22
COL6A2-201ENST00000300527 KRT26Q7Z3Y9 468 aa16.46■□□□□ 0.22
COL6A2-201ENST00000300527 BRMS1Q9HCU9 246 aa16.46■□□□□ 0.22
COL6A2-201ENST00000300527 MCM3P25205 808 aa16.45■□□□□ 0.22
COL6A2-201ENST00000300527 KRT2P35908 639 aa16.45■□□□□ 0.22
COL6A2-201ENST00000300527 RNASE9P60153 205 aaKnown RBP16.45■□□□□ 0.22
COL6A2-201ENST00000300527 HERVK_113P62684 666 aa16.45■□□□□ 0.22
COL6A2-201ENST00000300527 CKAP4Q07065 602 aaKnown RBP16.45■□□□□ 0.22
COL6A2-201ENST00000300527 GSDMAQ96QA5 445 aa16.45■□□□□ 0.22
COL6A2-201ENST00000300527 HAUS4Q9H6D7 363 aa16.45■□□□□ 0.22
COL6A2-201ENST00000300527 AGPAT5Q9NUQ2 364 aa16.45■□□□□ 0.22
COL6A2-201ENST00000300527 PARP1P09874 1014 aaKnown RBP16.45■□□□□ 0.22
COL6A2-201ENST00000300527 PIK3AP1Q6ZUJ8 805 aa16.45■□□□□ 0.22
COL6A2-201ENST00000300527 RCCD1A6NED2 376 aa16.44■□□□□ 0.22
COL6A2-201ENST00000300527 MYO1FO00160 1098 aa16.44■□□□□ 0.22
COL6A2-201ENST00000300527 TTC38Q5R3I4 469 aa16.44■□□□□ 0.22
COL6A2-201ENST00000300527 TOM1L2Q6ZVM7 507 aa16.44■□□□□ 0.22
COL6A2-201ENST00000300527 SGMS1Q86VZ5 419 aa16.44■□□□□ 0.22
COL6A2-201ENST00000300527 ANKLE2Q86XL3 938 aa16.44■□□□□ 0.22
COL6A2-201ENST00000300527 LRRC1Q9BTT6 524 aa16.44■□□□□ 0.22
COL6A2-201ENST00000300527 MYO1AQ9UBC5 1043 aa16.44■□□□□ 0.22
COL6A2-201ENST00000300527 DMGDHQ9UI17 866 aaKnown RBP16.44■□□□□ 0.22
COL6A2-201ENST00000300527 XDHP47989 1333 aa16.44■□□□□ 0.22
COL6A2-201ENST00000300527 AGPSO00116 658 aa16.44■□□□□ 0.22
COL6A2-201ENST00000300527 PLEKHA8P1O95397 391 aa16.44■□□□□ 0.22
COL6A2-201ENST00000300527 HNRNPH1P31943 449 aaKnown RBP16.44■□□□□ 0.22
COL6A2-201ENST00000300527 PRCPP42785 496 aa16.44■□□□□ 0.22
COL6A2-201ENST00000300527 CCNI2Q6ZMN8 369 aaPredicted RBP16.44■□□□□ 0.22
COL6A2-201ENST00000300527 OTUD6BQ8N6M0 293 aa16.44■□□□□ 0.22
COL6A2-201ENST00000300527 IFT81Q8WYA0 676 aa16.44■□□□□ 0.22
COL6A2-201ENST00000300527 ARL8AQ96BM9 186 aa16.44■□□□□ 0.22
COL6A2-201ENST00000300527 AATFQ9NY61 560 aaKnown RBP eCLIP16.44■□□□□ 0.22
COL6A2-201ENST00000300527 CCDC196A0A1B0GTZ2 297 aa16.43■□□□□ 0.22
COL6A2-201ENST00000300527 SETQ01105 290 aaPredicted RBP16.43■□□□□ 0.22
COL6A2-201ENST00000300527 SPAG1Q07617 926 aa16.43■□□□□ 0.22
COL6A2-201ENST00000300527 ZNF579Q8NAF0 562 aaKnown RBP16.43■□□□□ 0.22
COL6A2-201ENST00000300527 SDR42E1Q8WUS8 393 aa16.43■□□□□ 0.22
COL6A2-201ENST00000300527 ABCF2Q9UG63 623 aa16.43■□□□□ 0.22
COL6A2-201ENST00000300527 LTN1O94822 1766 aa16.43■□□□□ 0.22
COL6A2-201ENST00000300527 BAZ2BQ9UIF8 2168 aaKnown RBP16.43■□□□□ 0.22
COL6A2-201ENST00000300527 ATP2C2O75185 946 aa16.43■□□□□ 0.22
COL6A2-201ENST00000300527 SF3A3Q12874 501 aaKnown RBP eCLIP16.43■□□□□ 0.22
COL6A2-201ENST00000300527 CCDC91Q7Z6B0 441 aa16.43■□□□□ 0.22
COL6A2-201ENST00000300527 JPH2Q9BR39 696 aaPredicted RBP16.43■□□□□ 0.22
COL6A2-201ENST00000300527 KRT23Q9C075 422 aa16.43■□□□□ 0.22
COL6A2-201ENST00000300527 MLXIPQ9HAP2 919 aa16.43■□□□□ 0.22
COL6A2-201ENST00000300527 WDR19Q8NEZ3 1342 aa16.43■□□□□ 0.22
COL6A2-201ENST00000300527 SSBP05455 408 aaKnown RBP eCLIP16.43■□□□□ 0.22
COL6A2-201ENST00000300527 LIFRP42702 1097 aa16.43■□□□□ 0.22
COL6A2-201ENST00000300527 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.43■□□□□ 0.22
COL6A2-201ENST00000300527 LRWD1Q9UFC0 647 aa16.43■□□□□ 0.22
COL6A2-201ENST00000300527 CYP2D7A0A087X1C5 515 aa16.42■□□□□ 0.22
COL6A2-201ENST00000300527 PATL2C9JE40 543 aaKnown RBP16.42■□□□□ 0.22
COL6A2-201ENST00000300527 MAP2K2P36507 400 aa16.42■□□□□ 0.22
COL6A2-201ENST00000300527 ATP2B2Q01814 1243 aa16.42■□□□□ 0.22
COL6A2-201ENST00000300527 KIF5AQ12840 1032 aa16.42■□□□□ 0.22
COL6A2-201ENST00000300527 LCORLQ8N3X6 602 aa16.42■□□□□ 0.22
COL6A2-201ENST00000300527 NACAP1Q9BZK3 213 aa16.42■□□□□ 0.22
COL6A2-201ENST00000300527 OVOS2A0A0G2JMS6 1433 aa16.42■□□□□ 0.22
COL6A2-201ENST00000300527 ESYT3A0FGR9 886 aa16.42■□□□□ 0.22
COL6A2-201ENST00000300527 NCK2O43639 380 aa16.42■□□□□ 0.22
COL6A2-201ENST00000300527 CYLC1P35663 651 aaPredicted RBP16.42■□□□□ 0.22
COL6A2-201ENST00000300527 STAT6P42226 847 aa16.42■□□□□ 0.22
COL6A2-201ENST00000300527 AARSP49588 968 aaKnown RBP eCLIP16.42■□□□□ 0.22
COL6A2-201ENST00000300527 PPFIA1Q13136 1202 aa16.42■□□□□ 0.22
COL6A2-201ENST00000300527 ENOX2Q16206 610 aaKnown RBP16.42■□□□□ 0.22
COL6A2-201ENST00000300527 SPATA20Q8TB22 786 aa16.42■□□□□ 0.22
COL6A2-201ENST00000300527 VIPAS39Q9H9C1 493 aa16.42■□□□□ 0.22
COL6A2-201ENST00000300527 GEMIN8Q9NWZ8 242 aaKnown RBP16.42■□□□□ 0.22
COL6A2-201ENST00000300527 MTIF2P46199 727 aaKnown RBP16.42■□□□□ 0.22
COL6A2-201ENST00000300527 GUCY2FP51841 1108 aa16.42■□□□□ 0.22
COL6A2-201ENST00000300527 NLRP5P59047 1200 aa16.42■□□□□ 0.22
COL6A2-201ENST00000300527 KRT83P78385 493 aa16.42■□□□□ 0.22
COL6A2-201ENST00000300527 MAP3K12Q12852 859 aa16.42■□□□□ 0.22
COL6A2-201ENST00000300527 SPA17Q15506 151 aa16.42■□□□□ 0.22
COL6A2-201ENST00000300527 LRP2BPQ9P2M1 347 aa16.42■□□□□ 0.22
COL6A2-201ENST00000300527 LIMA1Q9UHB6 759 aaKnown RBP16.42■□□□□ 0.22
COL6A2-201ENST00000300527 HSF2BPO75031 334 aa16.41■□□□□ 0.22
COL6A2-201ENST00000300527 MOCS3O95396 460 aa16.41■□□□□ 0.22
COL6A2-201ENST00000300527 RPN1P04843 607 aaKnown RBP16.41■□□□□ 0.22
COL6A2-201ENST00000300527 PMS1P54277 932 aaKnown RBP16.41■□□□□ 0.22
COL6A2-201ENST00000300527 TBC1D8BQ0IIM8 1120 aa16.41■□□□□ 0.22
COL6A2-201ENST00000300527 TYW1BQ6NUM6 668 aa16.41■□□□□ 0.22
COL6A2-201ENST00000300527 MB21D1Q8N884 522 aa16.41■□□□□ 0.22
COL6A2-201ENST00000300527 ANKRD18BA2A2Z9 1011 aa16.41■□□□□ 0.22
COL6A2-201ENST00000300527 PP2D1A8MPX8 630 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms