RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 DDX11Q96FC9 970 aa7.62□□□□□ -1.19
TMC1-201ENST00000297784 LLPHQ9BRT6 129 aaKnown RBP7.62□□□□□ -1.19
TMC1-201ENST00000297784 UBXN6Q9BZV1 441 aa7.62□□□□□ -1.19
TMC1-201ENST00000297784 EHD4Q9H223 541 aa7.62□□□□□ -1.19
TMC1-201ENST00000297784 MKNK2Q9HBH9 465 aa7.62□□□□□ -1.19
TMC1-201ENST00000297784 COL2A1P02458 1487 aaPredicted RBP7.62□□□□□ -1.19
TMC1-201ENST00000297784 IGKV6D-41A0A0C4DH26 115 aa7.62□□□□□ -1.19
TMC1-201ENST00000297784 PTPDC1A2A3K4 754 aa7.62□□□□□ -1.19
TMC1-201ENST00000297784 TSPY2A6NKD2 308 aa7.62□□□□□ -1.19
TMC1-201ENST00000297784 TCP10L2B9ZVM9 353 aa7.62□□□□□ -1.19
TMC1-201ENST00000297784 ZRANB2O95218 330 aaKnown RBP eCLIP7.62□□□□□ -1.19
TMC1-201ENST00000297784 SLC3A2P08195 630 aaKnown RBP7.62□□□□□ -1.19
TMC1-201ENST00000297784 TPM4P67936 248 aa7.62□□□□□ -1.19
TMC1-201ENST00000297784 ANO6Q4KMQ2 910 aa7.62□□□□□ -1.19
TMC1-201ENST00000297784 TATDN1Q6P1N9 297 aa7.62□□□□□ -1.19
TMC1-201ENST00000297784 RASGRP2Q7LDG7 609 aa7.62□□□□□ -1.19
TMC1-201ENST00000297784 MICALL2Q8IY33 904 aa7.62□□□□□ -1.19
TMC1-201ENST00000297784 ZNF654Q8IZM8 581 aa7.62□□□□□ -1.19
TMC1-201ENST00000297784 RGS22Q8NE09 1264 aa7.62□□□□□ -1.19
TMC1-201ENST00000297784 UBAC1Q9BSL1 405 aa7.62□□□□□ -1.19
TMC1-201ENST00000297784 CNOT7Q9UIV1 285 aaKnown RBP7.62□□□□□ -1.19
TMC1-201ENST00000297784 SLC12A7Q9Y666 1083 aa7.62□□□□□ -1.19
TMC1-201ENST00000297784 ZBTB43O43298 467 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 ENTPD3O75355 529 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 AKR1B1P15121 316 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 RPS12P25398 132 aaKnown RBP7.61□□□□□ -1.19
TMC1-201ENST00000297784 PLA2G4AP47712 749 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 METAP2P50579 478 aaKnown RBP eCLIP7.61□□□□□ -1.19
TMC1-201ENST00000297784 FUT2Q10981 343 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 CCDC144BQ3MJ40 725 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 TTC6Q86TZ1 520 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 IQCA1Q86XH1 822 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 FANCBQ8NB91 859 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 NEDD1Q8NHV4 660 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 TMEM39BQ9GZU3 492 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 CLSTN2Q9H4D0 955 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 ST7Q9NRC1 585 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 GJB4Q9NTQ9 266 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 GEMIN8Q9NWZ8 242 aaKnown RBP7.61□□□□□ -1.19
TMC1-201ENST00000297784 PI4KBQ9UBF8 816 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 PLIN4Q96Q06 1357 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 TSPY3P0CV98 308 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 TSPY8P0CW00 308 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 KRT85P78386 507 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 IFIT1BQ5T764 474 aaKnown RBP7.61□□□□□ -1.19
TMC1-201ENST00000297784 CDC37L1Q7L3B6 337 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 DGKHQ86XP1 1220 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 CLEC10AQ8IUN9 316 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 SIAH1Q8IUQ4 282 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 ZNF444Q8N0Y2 327 aaPredicted RBP7.61□□□□□ -1.19
TMC1-201ENST00000297784 CCAR2Q8N163 923 aaKnown RBP7.61□□□□□ -1.19
TMC1-201ENST00000297784 TMTC2Q8N394 836 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 PHKBQ93100 1093 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 SHISA4Q96DD7 197 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 CEP95Q96GE4 821 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 DHX36Q9H2U1 1008 aaKnown RBP7.61□□□□□ -1.19
TMC1-201ENST00000297784 HDAC9Q9UKV0 1011 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 GJA3Q9Y6H8 435 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 CCDC69A6NI79 296 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 PNMA6AP0CW24 399 aaPredicted RBP7.61□□□□□ -1.19
TMC1-201ENST00000297784 GUCY1A2P33402 732 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 NOP2P46087 812 aaKnown RBP7.61□□□□□ -1.19
TMC1-201ENST00000297784 KCNJ6P48051 423 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 HIRAP54198 1017 aaPredicted RBP7.61□□□□□ -1.19
TMC1-201ENST00000297784 SART3Q15020 963 aaKnown RBP7.61□□□□□ -1.19
TMC1-201ENST00000297784 NFXL1Q6ZNB6 911 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 GPC2Q8N158 579 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 TEPSINQ96N21 525 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 AIFM3Q96NN9 605 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 RASSF4Q9H2L5 321 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 TNMDQ9H2S6 317 aa7.61□□□□□ -1.19
TMC1-201ENST00000297784 V9GYY5 206 aaPredicted RBP7.61□□□□□ -1.19
TMC1-201ENST00000297784 CLCN6P51797 869 aa7.6□□□□□ -1.19
TMC1-201ENST00000297784 EIF6P56537 245 aaKnown RBP7.6□□□□□ -1.19
TMC1-201ENST00000297784 CCZ1BP86790 482 aa7.6□□□□□ -1.19
TMC1-201ENST00000297784 CCZ1P86791 482 aaPredicted RBP7.6□□□□□ -1.19
TMC1-201ENST00000297784 SLC35G1Q2M3R5 365 aa7.6□□□□□ -1.19
TMC1-201ENST00000297784 RBM26Q5T8P6 1007 aaKnown RBP7.6□□□□□ -1.19
TMC1-201ENST00000297784 LARP1BQ659C4 914 aaKnown RBP7.6□□□□□ -1.19
TMC1-201ENST00000297784 AMOTL1Q8IY63 956 aa7.6□□□□□ -1.19
TMC1-201ENST00000297784 TMEM47Q9BQJ4 181 aa7.6□□□□□ -1.19
TMC1-201ENST00000297784 ATAD5Q96QE3 1844 aa7.6□□□□□ -1.19
TMC1-201ENST00000297784 ERICH2A1L162 156 aa7.6□□□□□ -1.19
TMC1-201ENST00000297784 USP27XA6NNY8 438 aa7.6□□□□□ -1.19
TMC1-201ENST00000297784 DDNO94850 711 aaPredicted RBP7.6□□□□□ -1.19
TMC1-201ENST00000297784 LIG1P18858 919 aa7.6□□□□□ -1.19
TMC1-201ENST00000297784 EPS15P42566 896 aa7.6□□□□□ -1.19
TMC1-201ENST00000297784 RCAN1P53805 252 aa7.6□□□□□ -1.19
TMC1-201ENST00000297784 TBC1D10BQ4KMP7 808 aaPredicted RBP7.6□□□□□ -1.19
TMC1-201ENST00000297784 FKBP1CQ5VVH2 108 aa7.6□□□□□ -1.19
TMC1-201ENST00000297784 FAM151AQ8WW52 585 aa7.6□□□□□ -1.19
TMC1-201ENST00000297784 ZNF592Q92610 1267 aa7.6□□□□□ -1.19
TMC1-201ENST00000297784 MTMR4Q9NYA4 1195 aa7.6□□□□□ -1.19
TMC1-201ENST00000297784 PSD3Q9NYI0 1048 aa7.6□□□□□ -1.19
TMC1-201ENST00000297784 GPRC5DQ9NZD1 345 aa7.6□□□□□ -1.19
TMC1-201ENST00000297784 SWAP70Q9UH65 585 aa7.6□□□□□ -1.19
TMC1-201ENST00000297784 PLEKHA8P1O95397 391 aa7.59□□□□□ -1.19
TMC1-201ENST00000297784 SKILP12757 684 aa7.59□□□□□ -1.19
TMC1-201ENST00000297784 VEGFAP15692 232 aaPredicted RBP7.59□□□□□ -1.19
TMC1-201ENST00000297784 NT5C2P49902 561 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms