RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 MYL1P05976 194 aa21.61■■□□□ 1.05
TRA2A-201ENST00000297071 SF3B2Q13435 895 aaKnown RBP21.61■■□□□ 1.05
TRA2A-201ENST00000297071 RASGRF1Q13972 1273 aa21.61■■□□□ 1.05
TRA2A-201ENST00000297071 TTC38Q5R3I4 469 aa21.61■■□□□ 1.05
TRA2A-201ENST00000297071 TOM1L2Q6ZVM7 507 aa21.61■■□□□ 1.05
TRA2A-201ENST00000297071 CADPS2Q86UW7 1296 aa21.61■■□□□ 1.05
TRA2A-201ENST00000297071 GOLGA6L1Q8N7Z2 621 aa21.61■■□□□ 1.05
TRA2A-201ENST00000297071 SHISA4Q96DD7 197 aa21.61■■□□□ 1.05
TRA2A-201ENST00000297071 DNAJC7Q99615 494 aa21.61■■□□□ 1.05
TRA2A-201ENST00000297071 PHLPP1O60346 1717 aa21.61■■□□□ 1.05
TRA2A-201ENST00000297071 A0A0U1RQJ8 604 aa21.6■■□□□ 1.05
TRA2A-201ENST00000297071 DDAH1O94760 285 aa21.6■■□□□ 1.05
TRA2A-201ENST00000297071 NDUFA10O95299 355 aa21.6■■□□□ 1.05
TRA2A-201ENST00000297071 FGRP09769 529 aa21.6■■□□□ 1.05
TRA2A-201ENST00000297071 KRT9P35527 623 aa21.6■■□□□ 1.05
TRA2A-201ENST00000297071 DNAJC10Q8IXB1 793 aa21.6■■□□□ 1.05
TRA2A-201ENST00000297071 OR8K1Q8NGG5 319 aa21.6■■□□□ 1.05
TRA2A-201ENST00000297071 ATRIPQ8WXE1 791 aa21.6■■□□□ 1.05
TRA2A-201ENST00000297071 KCNJ18B7U540 433 aa21.59■■□□□ 1.05
TRA2A-201ENST00000297071 EEF1GP26641 437 aaKnown RBP21.59■■□□□ 1.05
TRA2A-201ENST00000297071 GYS2P54840 703 aa21.59■■□□□ 1.05
TRA2A-201ENST00000297071 KCNJ12Q14500 433 aa21.59■■□□□ 1.05
TRA2A-201ENST00000297071 LCORLQ8N3X6 602 aa21.59■■□□□ 1.05
TRA2A-201ENST00000297071 NOC3LQ8WTT2 800 aaKnown RBP21.59■■□□□ 1.05
TRA2A-201ENST00000297071 NUP88Q99567 741 aaPredicted RBP21.59■■□□□ 1.05
TRA2A-201ENST00000297071 TNKSO95271 1327 aa21.59■■□□□ 1.05
TRA2A-201ENST00000297071 ANO9A1A5B4 782 aa21.59■■□□□ 1.05
TRA2A-201ENST00000297071 RHOXF2BP0C7M4 288 aa21.59■■□□□ 1.05
TRA2A-201ENST00000297071 KRT83P78385 493 aa21.59■■□□□ 1.05
TRA2A-201ENST00000297071 RRAGBQ5VZM2 374 aa21.59■■□□□ 1.05
TRA2A-201ENST00000297071 RHOXF2Q9BQY4 288 aa21.59■■□□□ 1.05
TRA2A-201ENST00000297071 CAPN11Q9UMQ6 739 aa21.59■■□□□ 1.05
TRA2A-201ENST00000297071 CACNA1SQ13698 1873 aa21.59■■□□□ 1.05
TRA2A-201ENST00000297071 LONP1P36776 959 aaKnown RBP21.58■■□□□ 1.05
TRA2A-201ENST00000297071 MAGEA9P43362 315 aa21.58■■□□□ 1.05
TRA2A-201ENST00000297071 KCNB1Q14721 858 aa21.58■■□□□ 1.05
TRA2A-201ENST00000297071 NPY5RQ15761 445 aa21.58■■□□□ 1.05
TRA2A-201ENST00000297071 HLFQ16534 295 aa21.58■■□□□ 1.05
TRA2A-201ENST00000297071 MEA1Q16626 185 aa21.58■■□□□ 1.05
TRA2A-201ENST00000297071 RRP12Q5JTH9 1297 aaKnown RBP21.58■■□□□ 1.05
TRA2A-201ENST00000297071 CATIPQ7Z7H3 387 aa21.58■■□□□ 1.05
TRA2A-201ENST00000297071 RETREG2Q8NC44 543 aa21.58■■□□□ 1.05
TRA2A-201ENST00000297071 NUP133Q8WUM0 1156 aa21.58■■□□□ 1.05
TRA2A-201ENST00000297071 TRIM34Q9BYJ4 488 aa21.58■■□□□ 1.05
TRA2A-201ENST00000297071 THAP9Q9H5L6 903 aa21.58■■□□□ 1.05
TRA2A-201ENST00000297071 LGALS16A8MUM7 142 aa21.57■■□□□ 1.04
TRA2A-201ENST00000297071 NT5C2P49902 561 aa21.57■■□□□ 1.04
TRA2A-201ENST00000297071 NOA1Q8NC60 698 aaKnown RBP21.57■■□□□ 1.04
TRA2A-201ENST00000297071 NELFBQ8WX92 580 aa21.57■■□□□ 1.04
TRA2A-201ENST00000297071 IQCDQ96DY2 449 aa21.57■■□□□ 1.04
TRA2A-201ENST00000297071 ZKSCAN3Q9BRR0 538 aa21.57■■□□□ 1.04
TRA2A-201ENST00000297071 NUP58Q9BVL2 599 aa21.57■■□□□ 1.04
TRA2A-201ENST00000297071 VPS54Q9P1Q0 977 aa21.57■■□□□ 1.04
TRA2A-201ENST00000297071 TRMT112Q9UI30 125 aaKnown RBP21.57■■□□□ 1.04
TRA2A-201ENST00000297071 REXO2Q9Y3B8 237 aaKnown RBP21.57■■□□□ 1.04
TRA2A-201ENST00000297071 BAZ2AQ9UIF9 1905 aaKnown RBP21.57■■□□□ 1.04
TRA2A-201ENST00000297071 LRRIQ3A6PVS8 624 aaPredicted RBP21.57■■□□□ 1.04
TRA2A-201ENST00000297071 PRPF6O94906 941 aaKnown RBP21.57■■□□□ 1.04
TRA2A-201ENST00000297071 ATP2B1P20020 1258 aa21.57■■□□□ 1.04
TRA2A-201ENST00000297071 EARS2Q5JPH6 523 aaKnown RBP21.57■■□□□ 1.04
TRA2A-201ENST00000297071 ZNF34Q8IZ26 560 aa21.57■■□□□ 1.04
TRA2A-201ENST00000297071 SYNE4Q8N205 404 aa21.57■■□□□ 1.04
TRA2A-201ENST00000297071 ZNF507Q8TCN5 953 aa21.57■■□□□ 1.04
TRA2A-201ENST00000297071 ZSCAN10Q96SZ4 725 aaPredicted RBP21.57■■□□□ 1.04
TRA2A-201ENST00000297071 SAR1BQ9Y6B6 198 aa21.57■■□□□ 1.04
TRA2A-201ENST00000297071 PDS5AQ29RF7 1337 aaKnown RBP21.57■■□□□ 1.04
TRA2A-201ENST00000297071 PRKAB2O43741 272 aa21.56■■□□□ 1.04
TRA2A-201ENST00000297071 PPFIA4O75335 1185 aa21.56■■□□□ 1.04
TRA2A-201ENST00000297071 CCT6AP40227 531 aaKnown RBP21.56■■□□□ 1.04
TRA2A-201ENST00000297071 CDK17Q00537 523 aa21.56■■□□□ 1.04
TRA2A-201ENST00000297071 ITIH3Q06033 890 aa21.56■■□□□ 1.04
TRA2A-201ENST00000297071 PTGDRQ13258 359 aa21.56■■□□□ 1.04
TRA2A-201ENST00000297071 TMTC3Q6ZXV5 915 aa21.56■■□□□ 1.04
TRA2A-201ENST00000297071 CCDC170Q8IYT3 715 aa21.56■■□□□ 1.04
TRA2A-201ENST00000297071 MB21D1Q8N884 522 aa21.56■■□□□ 1.04
TRA2A-201ENST00000297071 SLF1Q9BQI6 1058 aa21.56■■□□□ 1.04
TRA2A-201ENST00000297071 FAM107BQ9H098 131 aa21.56■■□□□ 1.04
TRA2A-201ENST00000297071 TOMM22Q9NS69 142 aa21.56■■□□□ 1.04
TRA2A-201ENST00000297071 SOS2Q07890 1332 aaPredicted RBP21.56■■□□□ 1.04
TRA2A-201ENST00000297071 FAM205CA6NFA0 338 aa21.55■■□□□ 1.04
TRA2A-201ENST00000297071 N4BP1O75113 896 aaKnown RBP21.55■■□□□ 1.04
TRA2A-201ENST00000297071 RPN1P04843 607 aaKnown RBP21.55■■□□□ 1.04
TRA2A-201ENST00000297071 IQCEQ6IPM2 695 aa21.55■■□□□ 1.04
TRA2A-201ENST00000297071 ENAHQ8N8S7 591 aaPredicted RBP21.55■■□□□ 1.04
TRA2A-201ENST00000297071 AFAP1L1Q8TED9 768 aa21.55■■□□□ 1.04
TRA2A-201ENST00000297071 CCDC102AQ96A19 550 aa21.55■■□□□ 1.04
TRA2A-201ENST00000297071 BRIP1Q9BX63 1249 aa21.55■■□□□ 1.04
TRA2A-201ENST00000297071 VPS16Q9H269 839 aa21.55■■□□□ 1.04
TRA2A-201ENST00000297071 LCMT1Q9UIC8 334 aa21.55■■□□□ 1.04
TRA2A-201ENST00000297071 LUC7L2Q9Y383 392 aaKnown RBP21.55■■□□□ 1.04
TRA2A-201ENST00000297071 CNTNAP5Q8WYK1 1306 aa21.55■■□□□ 1.04
TRA2A-201ENST00000297071 ZC3H4Q9UPT8 1303 aaKnown RBP21.55■■□□□ 1.04
TRA2A-201ENST00000297071 RNF225M0QZC1 329 aaPredicted RBP21.55■■□□□ 1.04
TRA2A-201ENST00000297071 TROAPQ12815 778 aa21.55■■□□□ 1.04
TRA2A-201ENST00000297071 TSR1Q2NL82 804 aaKnown RBP21.55■■□□□ 1.04
TRA2A-201ENST00000297071 LRRC31Q6UY01 552 aa21.55■■□□□ 1.04
TRA2A-201ENST00000297071 ZNF572Q7Z3I7 529 aaPredicted RBP21.55■■□□□ 1.04
TRA2A-201ENST00000297071 SMYD4Q8IYR2 804 aaPredicted RBP21.55■■□□□ 1.04
TRA2A-201ENST00000297071 ADSSL1Q8N142 457 aa21.55■■□□□ 1.04
TRA2A-201ENST00000297071 COG1Q8WTW3 980 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms