RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 BICD2Q8TD16 824 aa17.89■□□□□ 0.45
LSM6-201ENST00000296581 DPF2Q92785 391 aa17.89■□□□□ 0.45
LSM6-201ENST00000296581 MKL1Q969V6 931 aa17.89■□□□□ 0.45
LSM6-201ENST00000296581 KANSL2Q9H9L4 492 aa17.89■□□□□ 0.45
LSM6-201ENST00000296581 NYAP2Q9P242 653 aa17.89■□□□□ 0.45
LSM6-201ENST00000296581 PCDHA7Q9UN72 937 aa17.89■□□□□ 0.45
LSM6-201ENST00000296581 DICER1Q9UPY3 1922 aaKnown RBP17.89■□□□□ 0.45
LSM6-201ENST00000296581 SHTN1A0MZ66 631 aa17.88■□□□□ 0.45
LSM6-201ENST00000296581 ESPNB1AK53 854 aa17.88■□□□□ 0.45
LSM6-201ENST00000296581 ME1P48163 572 aa17.88■□□□□ 0.45
LSM6-201ENST00000296581 SF3A1Q15459 793 aaKnown RBP17.88■□□□□ 0.45
LSM6-201ENST00000296581 RILPL1Q5EBL4 403 aa17.88■□□□□ 0.45
LSM6-201ENST00000296581 TNFRSF25Q93038 417 aa17.88■□□□□ 0.45
LSM6-201ENST00000296581 BRMS1Q9HCU9 246 aa17.88■□□□□ 0.45
LSM6-201ENST00000296581 A0A1W2PQ27 194 aa17.88■□□□□ 0.45
LSM6-201ENST00000296581 A0A1W2PQ64 194 aa17.88■□□□□ 0.45
LSM6-201ENST00000296581 A0A1W2PQD8 194 aa17.88■□□□□ 0.45
LSM6-201ENST00000296581 TOB1P50616 345 aaPredicted RBP17.88■□□□□ 0.45
LSM6-201ENST00000296581 ABCB5Q2M3G0 1257 aa17.88■□□□□ 0.45
LSM6-201ENST00000296581 ADALQ6DHV7 355 aa17.88■□□□□ 0.45
LSM6-201ENST00000296581 VEZTQ9HBM0 779 aa17.88■□□□□ 0.45
LSM6-201ENST00000296581 NBPF9Q3BBW0 867 aa17.87■□□□□ 0.45
LSM6-201ENST00000296581 PIBF1Q8WXW3 757 aa17.87■□□□□ 0.45
LSM6-201ENST00000296581 RIOX1Q9H6W3 641 aa17.87■□□□□ 0.45
LSM6-201ENST00000296581 DDX19AQ9NUU7 478 aaKnown RBP17.87■□□□□ 0.45
LSM6-201ENST00000296581 PGAP2Q9UHJ9 254 aa17.87■□□□□ 0.45
LSM6-201ENST00000296581 PPP6R2O75170 966 aa17.87■□□□□ 0.45
LSM6-201ENST00000296581 GMPSP49915 693 aaPredicted RBP17.87■□□□□ 0.45
LSM6-201ENST00000296581 MRE11P49959 708 aa17.87■□□□□ 0.45
LSM6-201ENST00000296581 ZNF543Q08ER8 600 aa17.87■□□□□ 0.45
LSM6-201ENST00000296581 SHROOM1Q2M3G4 852 aaPredicted RBP17.87■□□□□ 0.45
LSM6-201ENST00000296581 TBC1D12O60347 775 aa17.86■□□□□ 0.45
LSM6-201ENST00000296581 EEF2P13639 858 aaKnown RBP17.86■□□□□ 0.45
LSM6-201ENST00000296581 CALML3P27482 149 aa17.86■□□□□ 0.45
LSM6-201ENST00000296581 NLRP5P59047 1200 aa17.86■□□□□ 0.45
LSM6-201ENST00000296581 RRP1BQ14684 758 aaKnown RBP17.86■□□□□ 0.45
LSM6-201ENST00000296581 SEPT2Q15019 361 aa17.86■□□□□ 0.45
LSM6-201ENST00000296581 SIAH1Q8IUQ4 282 aa17.86■□□□□ 0.45
LSM6-201ENST00000296581 CCAR1Q8IX12 1150 aaKnown RBP17.86■□□□□ 0.45
LSM6-201ENST00000296581 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.86■□□□□ 0.45
LSM6-201ENST00000296581 GRPEL1Q9HAV7 217 aa17.86■□□□□ 0.45
LSM6-201ENST00000296581 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.86■□□□□ 0.45
LSM6-201ENST00000296581 BARHL2Q9NY43 387 aa17.86■□□□□ 0.45
LSM6-201ENST00000296581 DACT1Q9NYF0 836 aa17.86■□□□□ 0.45
LSM6-201ENST00000296581 WWC2Q6AWC2 1192 aa17.86■□□□□ 0.45
LSM6-201ENST00000296581 GPKOWQ92917 476 aaPredicted RBP eCLIP17.86■□□□□ 0.45
LSM6-201ENST00000296581 RRP36Q96EU6 259 aaKnown RBP17.86■□□□□ 0.45
LSM6-201ENST00000296581 FHDC1Q9C0D6 1143 aaPredicted RBP17.86■□□□□ 0.45
LSM6-201ENST00000296581 CPVLQ9H3G5 476 aa17.86■□□□□ 0.45
LSM6-201ENST00000296581 FRMPD2Q68DX3 1309 aaPredicted RBP17.85■□□□□ 0.45
LSM6-201ENST00000296581 NR1I2O75469 434 aa17.85■□□□□ 0.45
LSM6-201ENST00000296581 GDF11O95390 407 aa17.85■□□□□ 0.45
LSM6-201ENST00000296581 ICA1Q05084 483 aa17.85■□□□□ 0.45
LSM6-201ENST00000296581 AXDND1Q5T1B0 1012 aaPredicted RBP17.85■□□□□ 0.45
LSM6-201ENST00000296581 GPATCH4Q5T3I0 446 aaKnown RBP17.85■□□□□ 0.45
LSM6-201ENST00000296581 RBM26Q5T8P6 1007 aaKnown RBP17.85■□□□□ 0.45
LSM6-201ENST00000296581 JMYQ8N9B5 988 aa17.85■□□□□ 0.45
LSM6-201ENST00000296581 CCDC148Q8NFR7 591 aa17.85■□□□□ 0.45
LSM6-201ENST00000296581 TMEM39BQ9GZU3 492 aa17.85■□□□□ 0.45
LSM6-201ENST00000296581 GOLPH3LQ9H4A5 285 aa17.85■□□□□ 0.45
LSM6-201ENST00000296581 CABP5Q9NP86 173 aa17.85■□□□□ 0.45
LSM6-201ENST00000296581 SBF1O95248 1867 aa17.85■□□□□ 0.45
LSM6-201ENST00000296581 ZNF541Q9H0D2 1346 aa17.85■□□□□ 0.45
LSM6-201ENST00000296581 STXBP3O00186 592 aa17.84■□□□□ 0.45
LSM6-201ENST00000296581 JAG1P78504 1218 aa17.84■□□□□ 0.45
LSM6-201ENST00000296581 ATP2B2Q01814 1243 aa17.84■□□□□ 0.45
LSM6-201ENST00000296581 EARS2Q5JPH6 523 aaKnown RBP17.84■□□□□ 0.45
LSM6-201ENST00000296581 GALNT17Q6IS24 598 aa17.84■□□□□ 0.45
LSM6-201ENST00000296581 TYW1BQ6NUM6 668 aa17.84■□□□□ 0.45
LSM6-201ENST00000296581 MICALL2Q8IY33 904 aa17.84■□□□□ 0.45
LSM6-201ENST00000296581 DAGLBQ8NCG7 672 aa17.84■□□□□ 0.45
LSM6-201ENST00000296581 ENGASEQ8NFI3 743 aa17.84■□□□□ 0.45
LSM6-201ENST00000296581 NUP62CLQ9H1M0 184 aa17.84■□□□□ 0.45
LSM6-201ENST00000296581 CLSTN2Q9H4D0 955 aa17.84■□□□□ 0.45
LSM6-201ENST00000296581 MORC2Q9Y6X9 1032 aaPredicted RBP17.84■□□□□ 0.45
LSM6-201ENST00000296581 MAP3K10Q02779 954 aa17.84■□□□□ 0.45
LSM6-201ENST00000296581 MRPS27Q92552 414 aaKnown RBP17.84■□□□□ 0.45
LSM6-201ENST00000296581 UBA5Q9GZZ9 404 aa17.84■□□□□ 0.45
LSM6-201ENST00000296581 SYNPO2Q9UMS6 1093 aa17.84■□□□□ 0.45
LSM6-201ENST00000296581 PCDHA4Q9UN74 947 aa17.84■□□□□ 0.45
LSM6-201ENST00000296581 GJA3Q9Y6H8 435 aa17.84■□□□□ 0.45
LSM6-201ENST00000296581 FAM205CA6NFA0 338 aa17.83■□□□□ 0.45
LSM6-201ENST00000296581 EGFRP00533 1210 aa17.83■□□□□ 0.45
LSM6-201ENST00000296581 GH2P01242 217 aa17.83■□□□□ 0.45
LSM6-201ENST00000296581 TNNI2P48788 182 aa17.83■□□□□ 0.45
LSM6-201ENST00000296581 CCDC73Q6ZRK6 1079 aa17.83■□□□□ 0.45
LSM6-201ENST00000296581 BLIDQ8IZY5 108 aa17.83■□□□□ 0.45
LSM6-201ENST00000296581 FSIP1Q8NA03 581 aa17.83■□□□□ 0.45
LSM6-201ENST00000296581 DCAF4Q8WV16 495 aa17.83■□□□□ 0.45
LSM6-201ENST00000296581 CNOT7Q9UIV1 285 aaKnown RBP17.83■□□□□ 0.45
LSM6-201ENST00000296581 hCG_1984214I3L0E3 225 aa17.83■□□□□ 0.44
LSM6-201ENST00000296581 FAM160A1Q05DH4 1040 aa17.83■□□□□ 0.44
LSM6-201ENST00000296581 SNW1Q13573 536 aaKnown RBP17.83■□□□□ 0.44
LSM6-201ENST00000296581 HEATR3Q7Z4Q2 680 aa17.83■□□□□ 0.44
LSM6-201ENST00000296581 CDAN1Q8IWY9 1227 aa17.83■□□□□ 0.44
LSM6-201ENST00000296581 ZNF713Q8N859 430 aaPredicted RBP17.83■□□□□ 0.44
LSM6-201ENST00000296581 PIGSQ96S52 555 aa17.83■□□□□ 0.44
LSM6-201ENST00000296581 SEC63Q9UGP8 760 aaKnown RBP17.83■□□□□ 0.44
LSM6-201ENST00000296581 M0R2N6 131 aa17.82■□□□□ 0.44
LSM6-201ENST00000296581 LMNB1P20700 586 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms