RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 SLC1A4P43007 532 aa17.66■□□□□ 0.42
CCDC140-201ENST00000295226 HTRA3P83110 453 aa17.66■□□□□ 0.42
CCDC140-201ENST00000295226 NBR1Q14596 966 aa17.66■□□□□ 0.42
CCDC140-201ENST00000295226 FAM83BQ5T0W9 1011 aa17.66■□□□□ 0.42
CCDC140-201ENST00000295226 UBA5Q9GZZ9 404 aa17.66■□□□□ 0.42
CCDC140-201ENST00000295226 SH2D4AQ9H788 454 aa17.66■□□□□ 0.42
CCDC140-201ENST00000295226 PARP1P09874 1014 aaKnown RBP17.65■□□□□ 0.42
CCDC140-201ENST00000295226 SNHG28P0DPA3 235 aa17.65■□□□□ 0.42
CCDC140-201ENST00000295226 SLC16A2P36021 539 aa17.65■□□□□ 0.42
CCDC140-201ENST00000295226 GRM1Q13255 1194 aa17.65■□□□□ 0.42
CCDC140-201ENST00000295226 SPRYD7Q5W111 196 aa17.65■□□□□ 0.42
CCDC140-201ENST00000295226 RGMBQ6NW40 437 aa17.65■□□□□ 0.42
CCDC140-201ENST00000295226 SAMD1Q6SPF0 538 aaPredicted RBP17.65■□□□□ 0.42
CCDC140-201ENST00000295226 NBPF11Q86T75 865 aa17.65■□□□□ 0.42
CCDC140-201ENST00000295226 IL27Q8NEV9 243 aa17.65■□□□□ 0.42
CCDC140-201ENST00000295226 CTCFLQ8NI51 663 aaPredicted RBP17.65■□□□□ 0.42
CCDC140-201ENST00000295226 GTF3C6Q969F1 213 aa17.65■□□□□ 0.42
CCDC140-201ENST00000295226 SH2B1Q9NRF2 756 aaPredicted RBP17.65■□□□□ 0.42
CCDC140-201ENST00000295226 CALM1P0DP23 149 aa17.64■□□□□ 0.42
CCDC140-201ENST00000295226 CALM2P0DP24 149 aa17.64■□□□□ 0.42
CCDC140-201ENST00000295226 CALM3P0DP25 149 aa17.64■□□□□ 0.42
CCDC140-201ENST00000295226 APLP1P51693 650 aa17.64■□□□□ 0.42
CCDC140-201ENST00000295226 ZNF543Q08ER8 600 aa17.64■□□□□ 0.42
CCDC140-201ENST00000295226 SLC35G1Q2M3R5 365 aa17.64■□□□□ 0.42
CCDC140-201ENST00000295226 GADL1Q6ZQY3 521 aa17.64■□□□□ 0.42
CCDC140-201ENST00000295226 RASAL3Q86YV0 1011 aa17.64■□□□□ 0.42
CCDC140-201ENST00000295226 PIBF1Q8WXW3 757 aa17.64■□□□□ 0.42
CCDC140-201ENST00000295226 KCNH4Q9UQ05 1017 aa17.64■□□□□ 0.42
CCDC140-201ENST00000295226 PALM3A6NDB9 673 aaPredicted RBP17.64■□□□□ 0.41
CCDC140-201ENST00000295226 C19orf81C9J6K1 198 aa17.64■□□□□ 0.41
CCDC140-201ENST00000295226 KLRF2D3W0D1 207 aa17.64■□□□□ 0.41
CCDC140-201ENST00000295226 CXCL11O14625 94 aa17.64■□□□□ 0.41
CCDC140-201ENST00000295226 CTDNEP1O95476 244 aa17.64■□□□□ 0.41
CCDC140-201ENST00000295226 BMP3P12645 472 aa17.64■□□□□ 0.41
CCDC140-201ENST00000295226 VCAM1P19320 739 aa17.64■□□□□ 0.41
CCDC140-201ENST00000295226 USP14P54578 494 aa17.64■□□□□ 0.41
CCDC140-201ENST00000295226 PAXIP1Q6ZW49 1069 aaPredicted RBP17.64■□□□□ 0.41
CCDC140-201ENST00000295226 SRBD1Q8N5C6 995 aaKnown RBP17.64■□□□□ 0.41
CCDC140-201ENST00000295226 DCAF4Q8WV16 495 aa17.64■□□□□ 0.41
CCDC140-201ENST00000295226 GMCL1Q96IK5 515 aa17.64■□□□□ 0.41
CCDC140-201ENST00000295226 TMOD4Q9NZQ9 345 aa17.64■□□□□ 0.41
CCDC140-201ENST00000295226 PTPRFP10586 1907 aa17.64■□□□□ 0.41
CCDC140-201ENST00000295226 A0A0G2JLL6 359 aaPredicted RBP17.63■□□□□ 0.41
CCDC140-201ENST00000295226 hCG_1642624A0A1W2PR95 340 aa17.63■□□□□ 0.41
CCDC140-201ENST00000295226 TMEM232C9JQI7 657 aa17.63■□□□□ 0.41
CCDC140-201ENST00000295226 TREML2Q5T2D2 321 aa17.63■□□□□ 0.41
CCDC140-201ENST00000295226 PRRT2Q7Z6L0 340 aaPredicted RBP17.63■□□□□ 0.41
CCDC140-201ENST00000295226 PHKBQ93100 1093 aa17.63■□□□□ 0.41
CCDC140-201ENST00000295226 RPAP3Q9H6T3 665 aaPredicted RBP17.63■□□□□ 0.41
CCDC140-201ENST00000295226 VAT1LQ9HCJ6 419 aa17.63■□□□□ 0.41
CCDC140-201ENST00000295226 FBXO28Q9NVF7 368 aa17.63■□□□□ 0.41
CCDC140-201ENST00000295226 SYNPO2Q9UMS6 1093 aa17.63■□□□□ 0.41
CCDC140-201ENST00000295226 JAK2O60674 1132 aa17.62■□□□□ 0.41
CCDC140-201ENST00000295226 KIF5BP33176 963 aa17.62■□□□□ 0.41
CCDC140-201ENST00000295226 MOGSQ13724 837 aa17.62■□□□□ 0.41
CCDC140-201ENST00000295226 SH3D19Q5HYK7 790 aa17.62■□□□□ 0.41
CCDC140-201ENST00000295226 CYP4F22Q6NT55 531 aa17.62■□□□□ 0.41
CCDC140-201ENST00000295226 TMTC3Q6ZXV5 915 aa17.62■□□□□ 0.41
CCDC140-201ENST00000295226 MS4A4AQ96JQ5 239 aa17.62■□□□□ 0.41
CCDC140-201ENST00000295226 CPLX1O14810 134 aa17.61■□□□□ 0.41
CCDC140-201ENST00000295226 CYTH3O43739 400 aa17.61■□□□□ 0.41
CCDC140-201ENST00000295226 RCAN1P53805 252 aa17.61■□□□□ 0.41
CCDC140-201ENST00000295226 SNAP25P60880 206 aa17.61■□□□□ 0.41
CCDC140-201ENST00000295226 IKQ13123 557 aaPredicted RBP17.61■□□□□ 0.41
CCDC140-201ENST00000295226 SNAPC2Q13487 334 aa17.61■□□□□ 0.41
CCDC140-201ENST00000295226 CUL4AQ13619 759 aa17.61■□□□□ 0.41
CCDC140-201ENST00000295226 NTRK3Q16288 839 aa17.61■□□□□ 0.41
CCDC140-201ENST00000295226 ASPRV1Q53RT3 343 aa17.61■□□□□ 0.41
CCDC140-201ENST00000295226 LPAR1Q92633 364 aa17.61■□□□□ 0.41
CCDC140-201ENST00000295226 ZIC5Q96T25 663 aa17.61■□□□□ 0.41
CCDC140-201ENST00000295226 MAP3K14Q99558 947 aa17.61■□□□□ 0.41
CCDC140-201ENST00000295226 TANGO6Q9C0B7 1094 aa17.61■□□□□ 0.41
CCDC140-201ENST00000295226 CREBZFQ9NS37 354 aa17.61■□□□□ 0.41
CCDC140-201ENST00000295226 FAM155AB1AL88 458 aaPredicted RBP17.61■□□□□ 0.41
CCDC140-201ENST00000295226 FUT2Q10981 343 aa17.61■□□□□ 0.41
CCDC140-201ENST00000295226 DDX11Q96FC9 970 aa17.61■□□□□ 0.41
CCDC140-201ENST00000295226 C12orf42Q96LP6 360 aa17.61■□□□□ 0.41
CCDC140-201ENST00000295226 RBM28Q9NW13 759 aaKnown RBP17.61■□□□□ 0.41
CCDC140-201ENST00000295226 NID2Q14112 1375 aa17.6■□□□□ 0.41
CCDC140-201ENST00000295226 WDR46O15213 610 aaKnown RBP17.6■□□□□ 0.41
CCDC140-201ENST00000295226 SLC10A3P09131 477 aa17.6■□□□□ 0.41
CCDC140-201ENST00000295226 GPATCH4Q5T3I0 446 aaKnown RBP17.6■□□□□ 0.41
CCDC140-201ENST00000295226 NSUN7Q8NE18 718 aaKnown RBP17.6■□□□□ 0.41
CCDC140-201ENST00000295226 BRI3BPQ8WY22 251 aa17.6■□□□□ 0.41
CCDC140-201ENST00000295226 KIFC2Q96AC6 838 aa17.6■□□□□ 0.41
CCDC140-201ENST00000295226 CCL15-CCL14A0A0B4J2E2 113 aa17.59■□□□□ 0.41
CCDC140-201ENST00000295226 CCDC196A0A1B0GTZ2 297 aa17.59■□□□□ 0.41
CCDC140-201ENST00000295226 DHX16O60231 1041 aaKnown RBP17.59■□□□□ 0.41
CCDC140-201ENST00000295226 ZBTB48P10074 688 aaPredicted RBP17.59■□□□□ 0.41
CCDC140-201ENST00000295226 GTF2A2P52657 109 aa17.59■□□□□ 0.41
CCDC140-201ENST00000295226 CCL15Q16663 113 aa17.59■□□□□ 0.41
CCDC140-201ENST00000295226 DEFB115Q30KQ5 88 aa17.59■□□□□ 0.41
CCDC140-201ENST00000295226 GPAT2Q6NUI2 795 aa17.59■□□□□ 0.41
CCDC140-201ENST00000295226 ADGRF4Q8IZF3 695 aa17.59■□□□□ 0.41
CCDC140-201ENST00000295226 SLC26A6Q9BXS9 759 aa17.59■□□□□ 0.41
CCDC140-201ENST00000295226 V9GY48 417 aaPredicted RBP17.59■□□□□ 0.41
CCDC140-201ENST00000295226 FLOT1O75955 427 aa17.58■□□□□ 0.41
CCDC140-201ENST00000295226 HSP90AA1P07900 732 aaKnown RBP17.58■□□□□ 0.41
CCDC140-201ENST00000295226 GNAQP50148 359 aa17.58■□□□□ 0.41
CCDC140-201ENST00000295226 PTPN18Q99952 460 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms