RNA–Protein interactions for RNA: ENST00000294161.10

TTC9C-201, Transcript of tetratricopeptide repeat domain 9C, humanhuman

TSL 1 (best)

Gene TTC9C, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9C-201ENST00000294161 CCDC12Q8WUD4 166 aaPredicted RBP16.84■□□□□ 0.29
TTC9C-201ENST00000294161 DYNLL2Q96FJ2 89 aa16.84■□□□□ 0.29
TTC9C-201ENST00000294161 IL17RBQ9NRM6 502 aa16.84■□□□□ 0.29
TTC9C-201ENST00000294161 GAKO14976 1311 aa16.83■□□□□ 0.29
TTC9C-201ENST00000294161 ACTN4O43707 911 aaKnown RBP16.83■□□□□ 0.28
TTC9C-201ENST00000294161 C21orf2O43822 256 aa16.83■□□□□ 0.28
TTC9C-201ENST00000294161 RASA1P20936 1047 aa16.83■□□□□ 0.28
TTC9C-201ENST00000294161 SMARCA1P28370 1054 aa16.83■□□□□ 0.28
TTC9C-201ENST00000294161 SARSP49591 514 aaKnown RBP16.83■□□□□ 0.28
TTC9C-201ENST00000294161 TGFB2P61812 414 aa16.83■□□□□ 0.28
TTC9C-201ENST00000294161 ISM2Q6H9L7 571 aa16.83■□□□□ 0.28
TTC9C-201ENST00000294161 NEDD1Q8NHV4 660 aa16.83■□□□□ 0.28
TTC9C-201ENST00000294161 SHISA4Q96DD7 197 aa16.83■□□□□ 0.28
TTC9C-201ENST00000294161 MAN1B1Q9UKM7 699 aa16.83■□□□□ 0.28
TTC9C-201ENST00000294161 PCDHA4Q9UN74 947 aa16.83■□□□□ 0.28
TTC9C-201ENST00000294161 LRRC37AA6NMS7 1700 aa16.82■□□□□ 0.28
TTC9C-201ENST00000294161 LMOD1P29536 600 aaPredicted RBP16.82■□□□□ 0.28
TTC9C-201ENST00000294161 ALDH1B1P30837 517 aa16.82■□□□□ 0.28
TTC9C-201ENST00000294161 EVX2Q03828 476 aa16.82■□□□□ 0.28
TTC9C-201ENST00000294161 MORC3Q14149 939 aa16.82■□□□□ 0.28
TTC9C-201ENST00000294161 ZNF174Q15697 407 aa16.82■□□□□ 0.28
TTC9C-201ENST00000294161 NPY5RQ15761 445 aa16.82■□□□□ 0.28
TTC9C-201ENST00000294161 TPD52L1Q16890 204 aaPredicted RBP16.82■□□□□ 0.28
TTC9C-201ENST00000294161 TTLL6Q8N841 843 aa16.82■□□□□ 0.28
TTC9C-201ENST00000294161 SAP30BPQ9UHR5 308 aaKnown RBP16.82■□□□□ 0.28
TTC9C-201ENST00000294161 ATP6V0A2Q9Y487 856 aa16.82■□□□□ 0.28
TTC9C-201ENST00000294161 SFPQP23246 707 aaKnown RBP eCLIP16.82■□□□□ 0.28
TTC9C-201ENST00000294161 ERCC5P28715 1186 aaPredicted RBP16.82■□□□□ 0.28
TTC9C-201ENST00000294161 TXLNAP40222 546 aa16.82■□□□□ 0.28
TTC9C-201ENST00000294161 CDK8P49336 464 aa16.82■□□□□ 0.28
TTC9C-201ENST00000294161 UBASH3AP57075 661 aa16.82■□□□□ 0.28
TTC9C-201ENST00000294161 GRIN1Q05586 938 aa16.82■□□□□ 0.28
TTC9C-201ENST00000294161 PTGDRQ13258 359 aa16.82■□□□□ 0.28
TTC9C-201ENST00000294161 PIK3AP1Q6ZUJ8 805 aa16.82■□□□□ 0.28
TTC9C-201ENST00000294161 TMC6Q7Z403 805 aa16.82■□□□□ 0.28
TTC9C-201ENST00000294161 MTERF4Q7Z6M4 381 aaKnown RBP16.82■□□□□ 0.28
TTC9C-201ENST00000294161 FOXP4Q8IVH2 680 aaPredicted RBP16.82■□□□□ 0.28
TTC9C-201ENST00000294161 IQUBQ8NA54 791 aa16.82■□□□□ 0.28
TTC9C-201ENST00000294161 DAGLBQ8NCG7 672 aa16.82■□□□□ 0.28
TTC9C-201ENST00000294161 ENOX1Q8TC92 643 aaKnown RBP16.82■□□□□ 0.28
TTC9C-201ENST00000294161 CNKSR1Q969H4 720 aa16.82■□□□□ 0.28
TTC9C-201ENST00000294161 MAP7D2Q96T17 732 aa16.82■□□□□ 0.28
TTC9C-201ENST00000294161 EYA3Q99504 573 aa16.82■□□□□ 0.28
TTC9C-201ENST00000294161 SYT17Q9BSW7 474 aa16.82■□□□□ 0.28
TTC9C-201ENST00000294161 KCND1Q9NSA2 647 aa16.82■□□□□ 0.28
TTC9C-201ENST00000294161 POLLQ9UGP5 575 aa16.82■□□□□ 0.28
TTC9C-201ENST00000294161 CCDC194A0A1B0GVG4 234 aa16.81■□□□□ 0.28
TTC9C-201ENST00000294161 KIF2AO00139 706 aaPredicted RBP16.81■□□□□ 0.28
TTC9C-201ENST00000294161 LONP1P36776 959 aaKnown RBP16.81■□□□□ 0.28
TTC9C-201ENST00000294161 KCNJ6P48051 423 aa16.81■□□□□ 0.28
TTC9C-201ENST00000294161 GRIK5Q16478 980 aa16.81■□□□□ 0.28
TTC9C-201ENST00000294161 PDILTQ8N807 584 aa16.81■□□□□ 0.28
TTC9C-201ENST00000294161 SPATA20Q8TB22 786 aa16.81■□□□□ 0.28
TTC9C-201ENST00000294161 DHX58Q96C10 678 aa16.81■□□□□ 0.28
TTC9C-201ENST00000294161 GSDMAQ96QA5 445 aa16.81■□□□□ 0.28
TTC9C-201ENST00000294161 TMEM47Q9BQJ4 181 aa16.81■□□□□ 0.28
TTC9C-201ENST00000294161 PIM2Q9P1W9 311 aa16.81■□□□□ 0.28
TTC9C-201ENST00000294161 MAD2L2Q9UI95 211 aa16.81■□□□□ 0.28
TTC9C-201ENST00000294161 STX8Q9UNK0 236 aa16.81■□□□□ 0.28
TTC9C-201ENST00000294161 PAXBP1Q9Y5B6 917 aa16.81■□□□□ 0.28
TTC9C-201ENST00000294161 FLT1P17948 1338 aa16.81■□□□□ 0.28
TTC9C-201ENST00000294161 USP17L3A6NCW0 530 aa16.8■□□□□ 0.28
TTC9C-201ENST00000294161 USP17L4A6NCW7 530 aa16.8■□□□□ 0.28
TTC9C-201ENST00000294161 PALM3A6NDB9 673 aaPredicted RBP16.8■□□□□ 0.28
TTC9C-201ENST00000294161 FAM205CA6NFA0 338 aa16.8■□□□□ 0.28
TTC9C-201ENST00000294161 RRP9O43818 475 aaKnown RBP16.8■□□□□ 0.28
TTC9C-201ENST00000294161 TOP1P11387 765 aaKnown RBP16.8■□□□□ 0.28
TTC9C-201ENST00000294161 GTF2F1P35269 517 aaKnown RBP eCLIP16.8■□□□□ 0.28
TTC9C-201ENST00000294161 PLCD1P51178 756 aa16.8■□□□□ 0.28
TTC9C-201ENST00000294161 SLC4A8Q2Y0W8 1093 aa16.8■□□□□ 0.28
TTC9C-201ENST00000294161 EARS2Q5JPH6 523 aaKnown RBP16.8■□□□□ 0.28
TTC9C-201ENST00000294161 USP17L1Q7RTZ2 530 aa16.8■□□□□ 0.28
TTC9C-201ENST00000294161 SYMPKQ92797 1274 aaKnown RBP16.8■□□□□ 0.28
TTC9C-201ENST00000294161 SPZ1Q9BXG8 430 aa16.8■□□□□ 0.28
TTC9C-201ENST00000294161 ZC3H12CQ9C0D7 883 aaKnown RBP16.8■□□□□ 0.28
TTC9C-201ENST00000294161 BCS1LQ9Y276 419 aa16.8■□□□□ 0.28
TTC9C-201ENST00000294161 CCP110O43303 1012 aa16.8■□□□□ 0.28
TTC9C-201ENST00000294161 PARP1P09874 1014 aaKnown RBP16.8■□□□□ 0.28
TTC9C-201ENST00000294161 RHBDL3P58872 404 aa16.8■□□□□ 0.28
TTC9C-201ENST00000294161 CFAP100Q494V2 611 aa16.8■□□□□ 0.28
TTC9C-201ENST00000294161 CCDC112Q8NEF3 446 aa16.8■□□□□ 0.28
TTC9C-201ENST00000294161 C7orf43Q8WVR3 580 aa16.8■□□□□ 0.28
TTC9C-201ENST00000294161 BARHL2Q9NY43 387 aa16.8■□□□□ 0.28
TTC9C-201ENST00000294161 LTBP1Q14766 1721 aa16.79■□□□□ 0.28
TTC9C-201ENST00000294161 VWA3AA6NCI4 1184 aa16.79■□□□□ 0.28
TTC9C-201ENST00000294161 LAD1O00515 517 aa16.79■□□□□ 0.28
TTC9C-201ENST00000294161 TUBB4AP04350 444 aa16.79■□□□□ 0.28
TTC9C-201ENST00000294161 SH3RF1Q7Z6J0 888 aa16.79■□□□□ 0.28
TTC9C-201ENST00000294161 KLRF2D3W0D1 207 aa16.78■□□□□ 0.28
TTC9C-201ENST00000294161 G3V3G9 751 aa16.78■□□□□ 0.28
TTC9C-201ENST00000294161 FOXN1O15353 648 aa16.78■□□□□ 0.28
TTC9C-201ENST00000294161 TNNT1P13805 278 aa16.78■□□□□ 0.28
TTC9C-201ENST00000294161 CDK11BP21127 795 aaKnown RBP16.78■□□□□ 0.28
TTC9C-201ENST00000294161 GTF2IP78347 998 aa16.78■□□□□ 0.28
TTC9C-201ENST00000294161 CCZ1BP86790 482 aa16.78■□□□□ 0.28
TTC9C-201ENST00000294161 CCZ1P86791 482 aaPredicted RBP16.78■□□□□ 0.28
TTC9C-201ENST00000294161 DALRD3Q5D0E6 543 aaKnown RBP16.78■□□□□ 0.28
TTC9C-201ENST00000294161 PPP4R3BQ5MIZ7 849 aa16.78■□□□□ 0.28
TTC9C-201ENST00000294161 DCAF8Q5TAQ9 597 aa16.78■□□□□ 0.28
TTC9C-201ENST00000294161 RRP36Q96EU6 259 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms