RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 TNKSO95271 1327 aa13.6□□□□□ -0.23
CLPB-201ENST00000294053 CDKL5O76039 1030 aa13.6□□□□□ -0.23
CLPB-201ENST00000294053 PRDX5P30044 214 aa13.6□□□□□ -0.23
CLPB-201ENST00000294053 CCT6AP40227 531 aaKnown RBP13.6□□□□□ -0.23
CLPB-201ENST00000294053 DIS3L2Q8IYB7 885 aaKnown RBP13.6□□□□□ -0.23
CLPB-201ENST00000294053 IGSF22Q8N9C0 903 aa13.6□□□□□ -0.23
CLPB-201ENST00000294053 ANKRD20A12PQ8NF67 263 aa13.6□□□□□ -0.23
CLPB-201ENST00000294053 CAGE1Q8TC20 777 aa13.6□□□□□ -0.23
CLPB-201ENST00000294053 L1RE1Q9UN81 338 aa13.6□□□□□ -0.23
CLPB-201ENST00000294053 MYH13Q9UKX3 1938 aa13.6□□□□□ -0.23
CLPB-201ENST00000294053 PNPLA7Q6ZV29 1317 aa13.59□□□□□ -0.23
CLPB-201ENST00000294053 AKR1B15C9JRZ8 316 aaPredicted RBP13.59□□□□□ -0.23
CLPB-201ENST00000294053 MAP2K7O14733 419 aa13.59□□□□□ -0.23
CLPB-201ENST00000294053 IKBKBO14920 756 aa13.59□□□□□ -0.23
CLPB-201ENST00000294053 MAP2K2P36507 400 aa13.59□□□□□ -0.23
CLPB-201ENST00000294053 AFMP43652 599 aa13.59□□□□□ -0.23
CLPB-201ENST00000294053 CORO7P57737 925 aa13.59□□□□□ -0.23
CLPB-201ENST00000294053 CPLX2Q6PUV4 134 aaKnown RBP13.59□□□□□ -0.23
CLPB-201ENST00000294053 ZNF652Q9Y2D9 606 aa13.59□□□□□ -0.23
CLPB-201ENST00000294053 BCORQ6W2J9 1755 aa13.59□□□□□ -0.23
CLPB-201ENST00000294053 ZNF804BA4D1E1 1349 aa13.59□□□□□ -0.23
CLPB-201ENST00000294053 CASZ1Q86V15 1759 aa13.59□□□□□ -0.23
CLPB-201ENST00000294053 CMA1P23946 247 aa13.59□□□□□ -0.23
CLPB-201ENST00000294053 MATR3P43243 847 aaKnown RBP eCLIP13.59□□□□□ -0.23
CLPB-201ENST00000294053 FMR1Q06787 632 aaKnown RBP eCLIP13.59□□□□□ -0.23
CLPB-201ENST00000294053 TRIM29Q14134 588 aa13.59□□□□□ -0.23
CLPB-201ENST00000294053 RAD9BQ6WBX8 426 aa13.59□□□□□ -0.23
CLPB-201ENST00000294053 CCDC91Q7Z6B0 441 aa13.59□□□□□ -0.23
CLPB-201ENST00000294053 TADA2BQ86TJ2 420 aa13.59□□□□□ -0.23
CLPB-201ENST00000294053 FOXP4Q8IVH2 680 aaPredicted RBP13.59□□□□□ -0.23
CLPB-201ENST00000294053 ZNF654Q8IZM8 581 aa13.59□□□□□ -0.23
CLPB-201ENST00000294053 KRT23Q9C075 422 aa13.59□□□□□ -0.23
CLPB-201ENST00000294053 FAM107BQ9H098 131 aa13.59□□□□□ -0.23
CLPB-201ENST00000294053 AATFQ9NY61 560 aaKnown RBP eCLIP13.59□□□□□ -0.23
CLPB-201ENST00000294053 PSD3Q9NYI0 1048 aa13.59□□□□□ -0.23
CLPB-201ENST00000294053 MKRN1Q9UHC7 482 aaKnown RBP13.59□□□□□ -0.23
CLPB-201ENST00000294053 KCNH3Q9ULD8 1083 aa13.59□□□□□ -0.23
CLPB-201ENST00000294053 CACNA1SQ13698 1873 aa13.58□□□□□ -0.23
CLPB-201ENST00000294053 GNPATO15228 680 aa13.58□□□□□ -0.23
CLPB-201ENST00000294053 SRGAP2O75044 1071 aa13.58□□□□□ -0.23
CLPB-201ENST00000294053 FMNL1O95466 1100 aaPredicted RBP13.58□□□□□ -0.23
CLPB-201ENST00000294053 CASP1P29466 404 aa13.58□□□□□ -0.23
CLPB-201ENST00000294053 KCNJ6P48051 423 aa13.58□□□□□ -0.23
CLPB-201ENST00000294053 RBL2Q08999 1139 aa13.58□□□□□ -0.23
CLPB-201ENST00000294053 EARS2Q5JPH6 523 aaKnown RBP13.58□□□□□ -0.23
CLPB-201ENST00000294053 BARGINQ6ZT62 677 aa13.58□□□□□ -0.23
CLPB-201ENST00000294053 USP49Q70CQ1 688 aa13.58□□□□□ -0.23
CLPB-201ENST00000294053 GPIHBP1Q8IV16 184 aa13.58□□□□□ -0.23
CLPB-201ENST00000294053 NGLY1Q96IV0 654 aa13.58□□□□□ -0.23
CLPB-201ENST00000294053 GPR101Q96P66 508 aaPredicted RBP13.58□□□□□ -0.23
CLPB-201ENST00000294053 SLF1Q9BQI6 1058 aa13.58□□□□□ -0.23
CLPB-201ENST00000294053 TFR2Q9UP52 801 aa13.58□□□□□ -0.23
CLPB-201ENST00000294053 PCDHB6Q9Y5E3 794 aa13.58□□□□□ -0.23
CLPB-201ENST00000294053 WNT7AO00755 349 aa13.58□□□□□ -0.24
CLPB-201ENST00000294053 POLR2DO15514 142 aaKnown RBP13.58□□□□□ -0.24
CLPB-201ENST00000294053 ECM2O94769 699 aaPredicted RBP13.58□□□□□ -0.24
CLPB-201ENST00000294053 CYP2D6P10635 497 aa13.58□□□□□ -0.24
CLPB-201ENST00000294053 TMEM139Q8IV31 216 aa13.58□□□□□ -0.24
CLPB-201ENST00000294053 FNBP4Q8N3X1 1017 aaPredicted RBP13.58□□□□□ -0.24
CLPB-201ENST00000294053 STAMQ92783 540 aa13.58□□□□□ -0.24
CLPB-201ENST00000294053 UBAC1Q9BSL1 405 aa13.58□□□□□ -0.24
CLPB-201ENST00000294053 CNNM2Q9H8M5 875 aa13.58□□□□□ -0.24
CLPB-201ENST00000294053 VPS54Q9P1Q0 977 aa13.58□□□□□ -0.24
CLPB-201ENST00000294053 EBAG9O00559 213 aa13.58□□□□□ -0.24
CLPB-201ENST00000294053 PLEKHA8P1O95397 391 aa13.58□□□□□ -0.24
CLPB-201ENST00000294053 IFNAR1P17181 557 aa13.58□□□□□ -0.24
CLPB-201ENST00000294053 NOSTRINQ8IVI9 506 aa13.58□□□□□ -0.24
CLPB-201ENST00000294053 SMYD4Q8IYR2 804 aaPredicted RBP13.58□□□□□ -0.24
CLPB-201ENST00000294053 ENAHQ8N8S7 591 aaPredicted RBP13.58□□□□□ -0.24
CLPB-201ENST00000294053 FANCBQ8NB91 859 aa13.58□□□□□ -0.24
CLPB-201ENST00000294053 BSDC1Q9NW68 430 aaPredicted RBP13.58□□□□□ -0.24
CLPB-201ENST00000294053 HDAC6Q9UBN7 1215 aa13.58□□□□□ -0.24
CLPB-201ENST00000294053 MMP1P03956 469 aa13.57□□□□□ -0.24
CLPB-201ENST00000294053 CDC25AP30304 524 aa13.57□□□□□ -0.24
CLPB-201ENST00000294053 ATP2B2Q01814 1243 aa13.57□□□□□ -0.24
CLPB-201ENST00000294053 FAM47AQ5JRC9 791 aa13.57□□□□□ -0.24
CLPB-201ENST00000294053 CRACR2BQ8N4Y2 399 aaPredicted RBP13.57□□□□□ -0.24
CLPB-201ENST00000294053 CCDC148Q8NFR7 591 aa13.57□□□□□ -0.24
CLPB-201ENST00000294053 FAM71BQ8TC56 605 aa13.57□□□□□ -0.24
CLPB-201ENST00000294053 BCAS4Q8TDM0 211 aa13.57□□□□□ -0.24
CLPB-201ENST00000294053 BPIFA3Q9BQP9 254 aa13.57□□□□□ -0.24
CLPB-201ENST00000294053 JPH2Q9BR39 696 aaPredicted RBP13.57□□□□□ -0.24
CLPB-201ENST00000294053 BRMS1Q9HCU9 246 aa13.57□□□□□ -0.24
CLPB-201ENST00000294053 ERICH2A1L162 156 aa13.57□□□□□ -0.24
CLPB-201ENST00000294053 USP17L12C9JPN9 530 aa13.57□□□□□ -0.24
CLPB-201ENST00000294053 USP17L21D6R901 530 aa13.57□□□□□ -0.24
CLPB-201ENST00000294053 ZEB2O60315 1214 aa13.57□□□□□ -0.24
CLPB-201ENST00000294053 VEGFAP15692 232 aaPredicted RBP13.57□□□□□ -0.24
CLPB-201ENST00000294053 HSPA1LP34931 641 aa13.57□□□□□ -0.24
CLPB-201ENST00000294053 MCTP2Q6DN12 878 aa13.57□□□□□ -0.24
CLPB-201ENST00000294053 MMS22LQ6ZRQ5 1243 aa13.57□□□□□ -0.24
CLPB-201ENST00000294053 METTL16Q86W50 562 aaKnown RBP13.57□□□□□ -0.24
CLPB-201ENST00000294053 COL5A3P25940 1745 aaPredicted RBP13.57□□□□□ -0.24
CLPB-201ENST00000294053 PPFIA4O75335 1185 aa13.56□□□□□ -0.24
CLPB-201ENST00000294053 CASP14P31944 242 aa13.56□□□□□ -0.24
CLPB-201ENST00000294053 SF3B3Q15393 1217 aaKnown RBP13.56□□□□□ -0.24
CLPB-201ENST00000294053 SEC23AQ15436 765 aa13.56□□□□□ -0.24
CLPB-201ENST00000294053 CAVIN4Q5BKX8 364 aa13.56□□□□□ -0.24
CLPB-201ENST00000294053 CT47A1Q5JQC4 288 aaPredicted RBP13.56□□□□□ -0.24
CLPB-201ENST00000294053 NBPF5PQ86XG9 351 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms