RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 ADAMTS5Q9UNA0 930 aa10.63□□□□□ -0.71
TFF1-201ENST00000291527 TACC3Q9Y6A5 838 aa10.63□□□□□ -0.71
TFF1-201ENST00000291527 REV3LO60673 3130 aa10.63□□□□□ -0.71
TFF1-201ENST00000291527 A0A1W2PPC1 479 aa10.62□□□□□ -0.71
TFF1-201ENST00000291527 RBAK-RBAKDNI3L0D1 243 aa10.62□□□□□ -0.71
TFF1-201ENST00000291527 RASA1P20936 1047 aa10.62□□□□□ -0.71
TFF1-201ENST00000291527 ITGB8P26012 769 aa10.62□□□□□ -0.71
TFF1-201ENST00000291527 RTP1P59025 263 aa10.62□□□□□ -0.71
TFF1-201ENST00000291527 CCNA1P78396 465 aa10.62□□□□□ -0.71
TFF1-201ENST00000291527 FAM83BQ5T0W9 1011 aa10.62□□□□□ -0.71
TFF1-201ENST00000291527 DPP9Q86TI2 863 aa10.62□□□□□ -0.71
TFF1-201ENST00000291527 CERS3Q8IU89 383 aa10.62□□□□□ -0.71
TFF1-201ENST00000291527 TDHQ8IZJ6 230 aa10.62□□□□□ -0.71
TFF1-201ENST00000291527 DEFB123Q8N688 67 aa10.62□□□□□ -0.71
TFF1-201ENST00000291527 LPAR1Q92633 364 aa10.62□□□□□ -0.71
TFF1-201ENST00000291527 MAML3Q96JK9 1138 aa10.62□□□□□ -0.71
TFF1-201ENST00000291527 INCENPQ9NQS7 918 aa10.62□□□□□ -0.71
TFF1-201ENST00000291527 ATP8A2Q9NTI2 1148 aa10.62□□□□□ -0.71
TFF1-201ENST00000291527 HOXC10Q9NYD6 342 aa10.62□□□□□ -0.71
TFF1-201ENST00000291527 RIPK3Q9Y572 518 aa10.62□□□□□ -0.71
TFF1-201ENST00000291527 CHD9Q3L8U1 2897 aa10.62□□□□□ -0.71
TFF1-201ENST00000291527 TRIM43BA6NCK2 446 aa10.61□□□□□ -0.71
TFF1-201ENST00000291527 HMMRO75330 724 aa10.61□□□□□ -0.71
TFF1-201ENST00000291527 PRDM1O75626 825 aa10.61□□□□□ -0.71
TFF1-201ENST00000291527 MYCNP04198 464 aaPredicted RBP10.61□□□□□ -0.71
TFF1-201ENST00000291527 CAPN2P17655 700 aa10.61□□□□□ -0.71
TFF1-201ENST00000291527 PTGS1P23219 599 aa10.61□□□□□ -0.71
TFF1-201ENST00000291527 UBE3CQ15386 1083 aa10.61□□□□□ -0.71
TFF1-201ENST00000291527 LRIT3Q3SXY7 679 aa10.61□□□□□ -0.71
TFF1-201ENST00000291527 FAM47AQ5JRC9 791 aa10.61□□□□□ -0.71
TFF1-201ENST00000291527 C9orf50Q5SZB4 431 aa10.61□□□□□ -0.71
TFF1-201ENST00000291527 OLFML2BQ68BL8 750 aa10.61□□□□□ -0.71
TFF1-201ENST00000291527 SLC39A5Q6ZMH5 540 aa10.61□□□□□ -0.71
TFF1-201ENST00000291527 TRIM43Q96BQ3 446 aaPredicted RBP10.61□□□□□ -0.71
TFF1-201ENST00000291527 FAM161BQ96MY7 647 aa10.61□□□□□ -0.71
TFF1-201ENST00000291527 LRRCC1Q9C099 1032 aa10.61□□□□□ -0.71
TFF1-201ENST00000291527 MTMR10Q9NXD2 777 aa10.61□□□□□ -0.71
TFF1-201ENST00000291527 SWAP70Q9UH65 585 aa10.61□□□□□ -0.71
TFF1-201ENST00000291527 ZNF214Q9UL59 606 aaPredicted RBP10.61□□□□□ -0.71
TFF1-201ENST00000291527 PCDHB15Q9Y5E8 787 aa10.61□□□□□ -0.71
TFF1-201ENST00000291527 GTF3C3Q9Y5Q9 886 aa10.61□□□□□ -0.71
TFF1-201ENST00000291527 DDX49Q9Y6V7 483 aaKnown RBP10.61□□□□□ -0.71
TFF1-201ENST00000291527 IVNS1ABPQ9Y6Y0 642 aa10.61□□□□□ -0.71
TFF1-201ENST00000291527 MINDY4BA8MYZ0 360 aa10.6□□□□□ -0.71
TFF1-201ENST00000291527 VWA5AO00534 786 aa10.6□□□□□ -0.71
TFF1-201ENST00000291527 FOXP2O15409 715 aa10.6□□□□□ -0.71
TFF1-201ENST00000291527 ADCY6O43306 1168 aa10.6□□□□□ -0.71
TFF1-201ENST00000291527 RAD21O60216 631 aa10.6□□□□□ -0.71
TFF1-201ENST00000291527 GLRX3O76003 335 aaKnown RBP10.6□□□□□ -0.71
TFF1-201ENST00000291527 PGK1P00558 417 aa10.6□□□□□ -0.71
TFF1-201ENST00000291527 ADCYAP1R1P41586 468 aa10.6□□□□□ -0.71
TFF1-201ENST00000291527 LRRC41Q15345 812 aa10.6□□□□□ -0.71
TFF1-201ENST00000291527 ZNF792Q3KQV3 632 aa10.6□□□□□ -0.71
TFF1-201ENST00000291527 TRIM60Q495X7 471 aa10.6□□□□□ -0.71
TFF1-201ENST00000291527 TMED8Q6PL24 325 aaPredicted RBP10.6□□□□□ -0.71
TFF1-201ENST00000291527 RASGRP2Q7LDG7 609 aa10.6□□□□□ -0.71
TFF1-201ENST00000291527 SLC17A8Q8NDX2 589 aa10.6□□□□□ -0.71
TFF1-201ENST00000291527 SHCBP1Q8NEM2 672 aa10.6□□□□□ -0.71
TFF1-201ENST00000291527 DCTPP1Q9H773 170 aa10.6□□□□□ -0.71
TFF1-201ENST00000291527 ARHGEF10LQ9HCE6 1279 aa10.6□□□□□ -0.71
TFF1-201ENST00000291527 ATP11BQ9Y2G3 1177 aa10.6□□□□□ -0.71
TFF1-201ENST00000291527 MYO9BQ13459 2157 aa10.6□□□□□ -0.71
TFF1-201ENST00000291527 LCTP09848 1927 aa10.6□□□□□ -0.71
TFF1-201ENST00000291527 IGKV6D-41A0A0C4DH26 115 aa10.59□□□□□ -0.71
TFF1-201ENST00000291527 DNM1LO00429 736 aa10.59□□□□□ -0.71
TFF1-201ENST00000291527 WDR46O15213 610 aaKnown RBP10.59□□□□□ -0.71
TFF1-201ENST00000291527 NDUFB10O96000 172 aa10.59□□□□□ -0.71
TFF1-201ENST00000291527 ZNF865P0CJ78 1059 aaPredicted RBP10.59□□□□□ -0.71
TFF1-201ENST00000291527 EPHB4P54760 987 aa10.59□□□□□ -0.71
TFF1-201ENST00000291527 SHHQ15465 462 aa10.59□□□□□ -0.71
TFF1-201ENST00000291527 FGD4Q96M96 766 aa10.59□□□□□ -0.71
TFF1-201ENST00000291527 GUCD1Q96NT3 240 aa10.59□□□□□ -0.71
TFF1-201ENST00000291527 MMP19Q99542 508 aa10.59□□□□□ -0.71
TFF1-201ENST00000291527 ECHDC1Q9NTX5 307 aa10.59□□□□□ -0.71
TFF1-201ENST00000291527 CHD7Q9P2D1 2997 aa10.59□□□□□ -0.71
TFF1-201ENST00000291527 PPP1R9AQ9ULJ8 1098 aa10.59□□□□□ -0.71
TFF1-201ENST00000291527 MYADML2A6NDP7 307 aa10.58□□□□□ -0.72
TFF1-201ENST00000291527 POTEB2H3BUK9 544 aa10.58□□□□□ -0.72
TFF1-201ENST00000291527 SEPT4O43236 478 aa10.58□□□□□ -0.72
TFF1-201ENST00000291527 STRNO43815 780 aa10.58□□□□□ -0.72
TFF1-201ENST00000291527 SNAI1O95863 264 aaPredicted RBP10.58□□□□□ -0.72
TFF1-201ENST00000291527 MS4A1P11836 297 aa10.58□□□□□ -0.72
TFF1-201ENST00000291527 STAT3P40763 770 aa10.58□□□□□ -0.72
TFF1-201ENST00000291527 SLC4A3P48751 1232 aa10.58□□□□□ -0.72
TFF1-201ENST00000291527 SNAP25P60880 206 aa10.58□□□□□ -0.72
TFF1-201ENST00000291527 SBK1Q52WX2 424 aa10.58□□□□□ -0.72
TFF1-201ENST00000291527 CCDC129Q6ZRS4 1044 aa10.58□□□□□ -0.72
TFF1-201ENST00000291527 RIOX2Q8IUF8 465 aa10.58□□□□□ -0.72
TFF1-201ENST00000291527 KBTBD3Q8NAB2 608 aa10.58□□□□□ -0.72
TFF1-201ENST00000291527 BADQ92934 168 aa10.58□□□□□ -0.72
TFF1-201ENST00000291527 CCDC17Q96LX7 622 aa10.58□□□□□ -0.72
TFF1-201ENST00000291527 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.58□□□□□ -0.72
TFF1-201ENST00000291527 MROH8Q9H579 483 aa10.58□□□□□ -0.72
TFF1-201ENST00000291527 PDLIM7Q9NR12 457 aa10.58□□□□□ -0.72
TFF1-201ENST00000291527 CLIP2Q9UDT6 1046 aa10.58□□□□□ -0.72
TFF1-201ENST00000291527 F5H6K3 240 aa10.57□□□□□ -0.72
TFF1-201ENST00000291527 DLL1O00548 723 aa10.57□□□□□ -0.72
TFF1-201ENST00000291527 RNF113AO15541 343 aaKnown RBP10.57□□□□□ -0.72
TFF1-201ENST00000291527 GPAA1O43292 621 aa10.57□□□□□ -0.72
TFF1-201ENST00000291527 FCER1AP12319 257 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms