RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 HOMER1Q86YM7 354 aa19.18■□□□□ 0.66
HIF3A-203ENST00000291300 GMLQ99445 158 aa19.18■□□□□ 0.66
HIF3A-203ENST00000291300 EHD4Q9H223 541 aa19.18■□□□□ 0.66
HIF3A-203ENST00000291300 CTAGE5O15320 804 aa19.18■□□□□ 0.66
HIF3A-203ENST00000291300 SYKP43405 635 aa19.18■□□□□ 0.66
HIF3A-203ENST00000291300 JAG1P78504 1218 aa19.18■□□□□ 0.66
HIF3A-203ENST00000291300 MYH4Q9Y623 1939 aa19.17■□□□□ 0.66
HIF3A-203ENST00000291300 FAM237AA0A1B0GTK4 181 aa19.17■□□□□ 0.66
HIF3A-203ENST00000291300 TRIM75PA6NK02 468 aa19.17■□□□□ 0.66
HIF3A-203ENST00000291300 PIGSQ96S52 555 aa19.17■□□□□ 0.66
HIF3A-203ENST00000291300 SPZ1Q9BXG8 430 aa19.17■□□□□ 0.66
HIF3A-203ENST00000291300 PPP1R1BQ9UD71 204 aaPredicted RBP19.17■□□□□ 0.66
HIF3A-203ENST00000291300 CLRN2A0PK11 232 aa19.16■□□□□ 0.66
HIF3A-203ENST00000291300 M0R2N6 131 aa19.16■□□□□ 0.66
HIF3A-203ENST00000291300 TTLL1O95922 423 aa19.16■□□□□ 0.66
HIF3A-203ENST00000291300 VIL1P09327 827 aaKnown RBP19.16■□□□□ 0.66
HIF3A-203ENST00000291300 ATP2B2Q01814 1243 aa19.16■□□□□ 0.66
HIF3A-203ENST00000291300 RRP1BQ14684 758 aaKnown RBP19.16■□□□□ 0.66
HIF3A-203ENST00000291300 LONRF3Q496Y0 759 aa19.16■□□□□ 0.66
HIF3A-203ENST00000291300 BLIDQ8IZY5 108 aa19.16■□□□□ 0.66
HIF3A-203ENST00000291300 CSRNP2Q9H175 543 aa19.16■□□□□ 0.66
HIF3A-203ENST00000291300 BRMS1Q9HCU9 246 aa19.16■□□□□ 0.66
HIF3A-203ENST00000291300 GPCPD1Q9NPB8 672 aa19.16■□□□□ 0.66
HIF3A-203ENST00000291300 PIM2Q9P1W9 311 aa19.16■□□□□ 0.66
HIF3A-203ENST00000291300 FOXN1O15353 648 aa19.16■□□□□ 0.66
HIF3A-203ENST00000291300 ADCY5O95622 1261 aa19.16■□□□□ 0.66
HIF3A-203ENST00000291300 PLCB2Q00722 1185 aa19.16■□□□□ 0.66
HIF3A-203ENST00000291300 R3HDM1Q15032 1099 aaKnown RBP19.16■□□□□ 0.66
HIF3A-203ENST00000291300 TTC38Q5R3I4 469 aa19.16■□□□□ 0.66
HIF3A-203ENST00000291300 TTBK2Q6IQ55 1244 aa19.16■□□□□ 0.66
HIF3A-203ENST00000291300 BARHL2Q9NY43 387 aa19.16■□□□□ 0.66
HIF3A-203ENST00000291300 KCNH3Q9ULD8 1083 aa19.16■□□□□ 0.66
HIF3A-203ENST00000291300 PCDHA4Q9UN74 947 aa19.16■□□□□ 0.66
HIF3A-203ENST00000291300 MYO3BQ8WXR4 1341 aa19.16■□□□□ 0.66
HIF3A-203ENST00000291300 SHTN1A0MZ66 631 aa19.15■□□□□ 0.66
HIF3A-203ENST00000291300 SNHG28P0DPA3 235 aa19.15■□□□□ 0.66
HIF3A-203ENST00000291300 ZNF165P49910 485 aa19.15■□□□□ 0.66
HIF3A-203ENST00000291300 TRIM44Q96DX7 344 aaPredicted RBP19.15■□□□□ 0.66
HIF3A-203ENST00000291300 SH3GLB2Q9NR46 395 aa19.15■□□□□ 0.66
HIF3A-203ENST00000291300 KIAA1468Q9P260 1216 aa19.15■□□□□ 0.66
HIF3A-203ENST00000291300 PI4KBQ9UBF8 816 aa19.15■□□□□ 0.66
HIF3A-203ENST00000291300 SRPRBQ9Y5M8 271 aaKnown RBP19.15■□□□□ 0.66
HIF3A-203ENST00000291300 BRCA1P38398 1863 aaKnown RBP19.15■□□□□ 0.66
HIF3A-203ENST00000291300 SPDYE2BA6NHP3 402 aa19.15■□□□□ 0.66
HIF3A-203ENST00000291300 TCP10L2B9ZVM9 353 aa19.15■□□□□ 0.66
HIF3A-203ENST00000291300 BIN1O00499 593 aa19.15■□□□□ 0.66
HIF3A-203ENST00000291300 GDF11O95390 407 aa19.15■□□□□ 0.66
HIF3A-203ENST00000291300 SPDYE6P0CI01 402 aa19.15■□□□□ 0.66
HIF3A-203ENST00000291300 SIAH1Q8IUQ4 282 aa19.15■□□□□ 0.66
HIF3A-203ENST00000291300 LZTS2Q9BRK4 669 aa19.15■□□□□ 0.66
HIF3A-203ENST00000291300 DHX36Q9H2U1 1008 aaKnown RBP19.15■□□□□ 0.66
HIF3A-203ENST00000291300 PCDHA6Q9UN73 950 aa19.15■□□□□ 0.66
HIF3A-203ENST00000291300 PCDHA8Q9Y5H6 950 aa19.15■□□□□ 0.66
HIF3A-203ENST00000291300 CDAN1Q8IWY9 1227 aa19.14■□□□□ 0.65
HIF3A-203ENST00000291300 A0A087X0B3 334 aa19.13■□□□□ 0.65
HIF3A-203ENST00000291300 PTGDRQ13258 359 aa19.13■□□□□ 0.65
HIF3A-203ENST00000291300 PNOCQ13519 176 aa19.13■□□□□ 0.65
HIF3A-203ENST00000291300 IQCB1Q15051 598 aa19.13■□□□□ 0.65
HIF3A-203ENST00000291300 STX1AQ16623 288 aa19.13■□□□□ 0.65
HIF3A-203ENST00000291300 CERKLQ49MI3 558 aaPredicted RBP19.13■□□□□ 0.65
HIF3A-203ENST00000291300 GRIPAP1Q4V328 841 aa19.13■□□□□ 0.65
HIF3A-203ENST00000291300 ISM2Q6H9L7 571 aa19.13■□□□□ 0.65
HIF3A-203ENST00000291300 METTL16Q86W50 562 aaKnown RBP19.13■□□□□ 0.65
HIF3A-203ENST00000291300 RIOX1Q9H6W3 641 aa19.13■□□□□ 0.65
HIF3A-203ENST00000291300 NPM3O75607 178 aaKnown RBP19.13■□□□□ 0.65
HIF3A-203ENST00000291300 MCM7P33993 719 aa19.13■□□□□ 0.65
HIF3A-203ENST00000291300 SLC16A2P36021 539 aa19.13■□□□□ 0.65
HIF3A-203ENST00000291300 TGFB2P61812 414 aa19.13■□□□□ 0.65
HIF3A-203ENST00000291300 CXCL9Q07325 125 aa19.13■□□□□ 0.65
HIF3A-203ENST00000291300 SEPT2Q15019 361 aa19.13■□□□□ 0.65
HIF3A-203ENST00000291300 IL17AQ16552 155 aa19.13■□□□□ 0.65
HIF3A-203ENST00000291300 DPCR1Q3MIW9 517 aa19.13■□□□□ 0.65
HIF3A-203ENST00000291300 TATDN1Q6P1N9 297 aa19.13■□□□□ 0.65
HIF3A-203ENST00000291300 KCTD1Q719H9 257 aa19.13■□□□□ 0.65
HIF3A-203ENST00000291300 FOXP4Q8IVH2 680 aaPredicted RBP19.13■□□□□ 0.65
HIF3A-203ENST00000291300 EPSTI1Q96J88 318 aa19.13■□□□□ 0.65
HIF3A-203ENST00000291300 MTFR1LQ9H019 292 aa19.13■□□□□ 0.65
HIF3A-203ENST00000291300 NOL7Q9UMY1 257 aaKnown RBP19.13■□□□□ 0.65
HIF3A-203ENST00000291300 EEF2P13639 858 aaKnown RBP19.12■□□□□ 0.65
HIF3A-203ENST00000291300 CALML3P27482 149 aa19.12■□□□□ 0.65
HIF3A-203ENST00000291300 PDILTQ8N807 584 aa19.12■□□□□ 0.65
HIF3A-203ENST00000291300 RRP36Q96EU6 259 aaKnown RBP19.12■□□□□ 0.65
HIF3A-203ENST00000291300 ZNRF3Q9ULT6 936 aa19.12■□□□□ 0.65
HIF3A-203ENST00000291300 CEP131Q9UPN4 1083 aa19.12■□□□□ 0.65
HIF3A-203ENST00000291300 SCAF8Q9UPN6 1271 aaKnown RBP19.12■□□□□ 0.65
HIF3A-203ENST00000291300 FER1L6Q2WGJ9 1857 aa19.12■□□□□ 0.65
HIF3A-203ENST00000291300 ATRNL1Q5VV63 1379 aa19.12■□□□□ 0.65
HIF3A-203ENST00000291300 NFKBIEO00221 500 aa19.12■□□□□ 0.65
HIF3A-203ENST00000291300 POLR2DO15514 142 aaKnown RBP19.12■□□□□ 0.65
HIF3A-203ENST00000291300 NAPAP54920 295 aa19.12■□□□□ 0.65
HIF3A-203ENST00000291300 ZNF543Q08ER8 600 aa19.12■□□□□ 0.65
HIF3A-203ENST00000291300 DALRD3Q5D0E6 543 aaKnown RBP19.12■□□□□ 0.65
HIF3A-203ENST00000291300 KRBA2Q6ZNG9 492 aa19.12■□□□□ 0.65
HIF3A-203ENST00000291300 NIM1KQ8IY84 436 aa19.12■□□□□ 0.65
HIF3A-203ENST00000291300 GRAMD1CQ8IYS0 662 aa19.12■□□□□ 0.65
HIF3A-203ENST00000291300 TIGD1Q96MW7 591 aa19.12■□□□□ 0.65
HIF3A-203ENST00000291300 ZNF70Q9UC06 446 aaPredicted RBP19.12■□□□□ 0.65
HIF3A-203ENST00000291300 ENTPD3O75355 529 aa19.11■□□□□ 0.65
HIF3A-203ENST00000291300 DHX40Q8IX18 779 aaKnown RBP19.11■□□□□ 0.65
HIF3A-203ENST00000291300 ZNF579Q8NAF0 562 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms