RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 CCND3P30281 292 aaPredicted RBP12.48□□□□□ -0.41
SNF8-201ENST00000290330 MNX1P50219 401 aaPredicted RBP12.48□□□□□ -0.41
SNF8-201ENST00000290330 PLS1Q14651 629 aa12.48□□□□□ -0.41
SNF8-201ENST00000290330 TMEM132BQ14DG7 1078 aa12.48□□□□□ -0.41
SNF8-201ENST00000290330 FAM83BQ5T0W9 1011 aa12.48□□□□□ -0.41
SNF8-201ENST00000290330 SAMD1Q6SPF0 538 aaPredicted RBP12.48□□□□□ -0.41
SNF8-201ENST00000290330 NECAB2Q7Z6G3 386 aa12.48□□□□□ -0.41
SNF8-201ENST00000290330 SMC5Q8IY18 1101 aa12.48□□□□□ -0.41
SNF8-201ENST00000290330 ZNF444Q8N0Y2 327 aaPredicted RBP12.48□□□□□ -0.41
SNF8-201ENST00000290330 LNPKQ9C0E8 428 aa12.48□□□□□ -0.41
SNF8-201ENST00000290330 NAPBQ9H115 298 aa12.48□□□□□ -0.41
SNF8-201ENST00000290330 RWDD1Q9H446 243 aaPredicted RBP12.48□□□□□ -0.41
SNF8-201ENST00000290330 MROH8Q9H579 483 aa12.48□□□□□ -0.41
SNF8-201ENST00000290330 FBXO28Q9NVF7 368 aa12.48□□□□□ -0.41
SNF8-201ENST00000290330 RLFQ13129 1914 aa12.48□□□□□ -0.41
SNF8-201ENST00000290330 F5H6K3 240 aa12.47□□□□□ -0.41
SNF8-201ENST00000290330 IGHA2P01877 340 aa12.47□□□□□ -0.41
SNF8-201ENST00000290330 ADORA2AP29274 412 aa12.47□□□□□ -0.41
SNF8-201ENST00000290330 KLRC3Q07444 240 aa12.47□□□□□ -0.41
SNF8-201ENST00000290330 PPARAQ07869 468 aa12.47□□□□□ -0.41
SNF8-201ENST00000290330 MFSD14CQ5VZR4 134 aa12.47□□□□□ -0.41
SNF8-201ENST00000290330 LHX8Q68G74 356 aa12.47□□□□□ -0.41
SNF8-201ENST00000290330 POTEHQ6S545 545 aa12.47□□□□□ -0.41
SNF8-201ENST00000290330 CCDC129Q6ZRS4 1044 aa12.47□□□□□ -0.41
SNF8-201ENST00000290330 NCAPG2Q86XI2 1143 aa12.47□□□□□ -0.41
SNF8-201ENST00000290330 EXOC6Q8TAG9 804 aa12.47□□□□□ -0.41
SNF8-201ENST00000290330 CLIP2Q9UDT6 1046 aa12.47□□□□□ -0.41
SNF8-201ENST00000290330 PPP1R9AQ9ULJ8 1098 aa12.47□□□□□ -0.41
SNF8-201ENST00000290330 COLQQ9Y215 455 aaPredicted RBP12.47□□□□□ -0.41
SNF8-201ENST00000290330 NR2E3Q9Y5X4 410 aa12.47□□□□□ -0.41
SNF8-201ENST00000290330 GREB1LQ9C091 1923 aaPredicted RBP12.47□□□□□ -0.41
SNF8-201ENST00000290330 A0A0G2JMZ2 1700 aa12.46□□□□□ -0.41
SNF8-201ENST00000290330 VWA5AO00534 786 aa12.46□□□□□ -0.41
SNF8-201ENST00000290330 COBLO75128 1261 aa12.46□□□□□ -0.41
SNF8-201ENST00000290330 NDUFB10O96000 172 aa12.46□□□□□ -0.41
SNF8-201ENST00000290330 IGHDP01880 384 aa12.46□□□□□ -0.41
SNF8-201ENST00000290330 PDE4BQ07343 736 aa12.46□□□□□ -0.41
SNF8-201ENST00000290330 B4GALNT3Q6L9W6 998 aa12.46□□□□□ -0.41
SNF8-201ENST00000290330 DPP9Q86TI2 863 aa12.46□□□□□ -0.41
SNF8-201ENST00000290330 ABRAQ8N0Z2 381 aa12.46□□□□□ -0.41
SNF8-201ENST00000290330 NEDD1Q8NHV4 660 aa12.46□□□□□ -0.41
SNF8-201ENST00000290330 MKL1Q969V6 931 aa12.46□□□□□ -0.41
SNF8-201ENST00000290330 CEP95Q96GE4 821 aa12.46□□□□□ -0.41
SNF8-201ENST00000290330 NUP88Q99567 741 aaPredicted RBP12.46□□□□□ -0.41
SNF8-201ENST00000290330 NBPF3Q9H094 633 aa12.46□□□□□ -0.41
SNF8-201ENST00000290330 HELLSQ9NRZ9 838 aa12.46□□□□□ -0.41
SNF8-201ENST00000290330 MTMR4Q9NYA4 1195 aa12.46□□□□□ -0.41
SNF8-201ENST00000290330 EVI5O60447 810 aa12.45□□□□□ -0.42
SNF8-201ENST00000290330 SLC25A27O95847 323 aa12.45□□□□□ -0.42
SNF8-201ENST00000290330 TTLL1O95922 423 aa12.45□□□□□ -0.42
SNF8-201ENST00000290330 SLC3A2P08195 630 aaKnown RBP12.45□□□□□ -0.42
SNF8-201ENST00000290330 TSPY3P0CV98 308 aa12.45□□□□□ -0.42
SNF8-201ENST00000290330 TSPY8P0CW00 308 aa12.45□□□□□ -0.42
SNF8-201ENST00000290330 CYP2C19P33261 490 aa12.45□□□□□ -0.42
SNF8-201ENST00000290330 TFAP4Q01664 338 aa12.45□□□□□ -0.42
SNF8-201ENST00000290330 FAM47AQ5JRC9 791 aa12.45□□□□□ -0.42
SNF8-201ENST00000290330 VPS53Q5VIR6 699 aa12.45□□□□□ -0.42
SNF8-201ENST00000290330 OLFML2BQ68BL8 750 aa12.45□□□□□ -0.42
SNF8-201ENST00000290330 TICAM2Q86XR7 235 aa12.45□□□□□ -0.42
SNF8-201ENST00000290330 RIOX2Q8IUF8 465 aa12.45□□□□□ -0.42
SNF8-201ENST00000290330 REPS2Q8NFH8 660 aa12.45□□□□□ -0.42
SNF8-201ENST00000290330 SLF1Q9BQI6 1058 aa12.45□□□□□ -0.42
SNF8-201ENST00000290330 ZNF214Q9UL59 606 aaPredicted RBP12.45□□□□□ -0.42
SNF8-201ENST00000290330 SYNPO2Q9UMS6 1093 aa12.45□□□□□ -0.42
SNF8-201ENST00000290330 PLIN4Q96Q06 1357 aa12.44□□□□□ -0.42
SNF8-201ENST00000290330 FCER1AP12319 257 aa12.44□□□□□ -0.42
SNF8-201ENST00000290330 STAT3P40763 770 aa12.44□□□□□ -0.42
SNF8-201ENST00000290330 CHRDL2Q6WN34 429 aa12.44□□□□□ -0.42
SNF8-201ENST00000290330 CHD1LQ86WJ1 897 aa12.44□□□□□ -0.42
SNF8-201ENST00000290330 PRPF38AQ8NAV1 312 aaKnown RBP12.44□□□□□ -0.42
SNF8-201ENST00000290330 TRPV1Q8NER1 839 aa12.44□□□□□ -0.42
SNF8-201ENST00000290330 FAM227BQ96M60 508 aa12.44□□□□□ -0.42
SNF8-201ENST00000290330 C11orf49Q9H6J7 331 aa12.44□□□□□ -0.42
SNF8-201ENST00000290330 SLC5A4Q9NY91 659 aa12.44□□□□□ -0.42
SNF8-201ENST00000290330 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.44□□□□□ -0.42
SNF8-201ENST00000290330 PFASO15067 1338 aa12.43□□□□□ -0.42
SNF8-201ENST00000290330 A0A0D9SFI3 127 aa12.43□□□□□ -0.42
SNF8-201ENST00000290330 MSCO60682 206 aa12.43□□□□□ -0.42
SNF8-201ENST00000290330 COL6A1P12109 1028 aa12.43□□□□□ -0.42
SNF8-201ENST00000290330 CYBAP13498 195 aa12.43□□□□□ -0.42
SNF8-201ENST00000290330 CNGA1P29973 690 aa12.43□□□□□ -0.42
SNF8-201ENST00000290330 NUCB1Q02818 461 aa12.43□□□□□ -0.42
SNF8-201ENST00000290330 CTDSPL2Q05D32 466 aa12.43□□□□□ -0.42
SNF8-201ENST00000290330 ALX1Q15699 326 aa12.43□□□□□ -0.42
SNF8-201ENST00000290330 MCMDC2Q4G0Z9 681 aa12.43□□□□□ -0.42
SNF8-201ENST00000290330 PLEKHM2Q8IWE5 1019 aa12.43□□□□□ -0.42
SNF8-201ENST00000290330 LRRC47Q8N1G4 583 aaKnown RBP12.43□□□□□ -0.42
SNF8-201ENST00000290330 GMCL1P1Q8NEA9 526 aa12.43□□□□□ -0.42
SNF8-201ENST00000290330 MAML3Q96JK9 1138 aa12.43□□□□□ -0.42
SNF8-201ENST00000290330 OSBPL3Q9H4L5 887 aa12.43□□□□□ -0.42
SNF8-201ENST00000290330 INCENPQ9NQS7 918 aa12.43□□□□□ -0.42
SNF8-201ENST00000290330 DDX20Q9UHI6 824 aaKnown RBP12.43□□□□□ -0.42
SNF8-201ENST00000290330 ANAPC4Q9UJX5 808 aa12.43□□□□□ -0.42
SNF8-201ENST00000290330 TACC3Q9Y6A5 838 aa12.43□□□□□ -0.42
SNF8-201ENST00000290330 PARP14Q460N5 1801 aa12.43□□□□□ -0.42
SNF8-201ENST00000290330 ZNF236Q9UL36 1845 aa12.43□□□□□ -0.42
SNF8-201ENST00000290330 TRIM6-TRIM34B2RNG4 842 aa12.42□□□□□ -0.42
SNF8-201ENST00000290330 FGAP02671 866 aa12.42□□□□□ -0.42
SNF8-201ENST00000290330 COPB2P35606 906 aa12.42□□□□□ -0.42
SNF8-201ENST00000290330 NMIQ13287 307 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms