RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 KAT14Q9H8E8 782 aa11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 TCP11L1Q9NUJ3 509 aa11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 CNPY2Q9Y2B0 182 aa11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 CENPFP49454 3210 aa11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 COL2A1P02458 1487 aaPredicted RBP11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 ADM5C9JUS6 153 aa11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 EPHX2P34913 555 aa11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 TNNI2P48788 182 aa11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 MMP14P50281 582 aa11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 PRKG1Q13976 671 aa11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 ABCB5Q2M3G0 1257 aa11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 EAPPQ56P03 285 aaPredicted RBP11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 SYNE3Q6ZMZ3 975 aa11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 NBPF11Q86T75 865 aa11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 SIAH1Q8IUQ4 282 aa11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 L3MBTL3Q96JM7 780 aaPredicted RBP11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 MTA3Q9BTC8 594 aa11.17□□□□□ -0.62
LRTOMT-201ENST00000289488 IGKV6D-41A0A0C4DH26 115 aa11.16□□□□□ -0.62
LRTOMT-201ENST00000289488 RAD21O60216 631 aa11.16□□□□□ -0.62
LRTOMT-201ENST00000289488 ZSCAN22P10073 491 aaPredicted RBP11.16□□□□□ -0.62
LRTOMT-201ENST00000289488 RTN1Q16799 776 aa11.16□□□□□ -0.62
LRTOMT-201ENST00000289488 SMARCC2Q8TAQ2 1214 aa11.16□□□□□ -0.62
LRTOMT-201ENST00000289488 ZNF526Q8TF50 670 aaPredicted RBP11.16□□□□□ -0.62
LRTOMT-201ENST00000289488 CGNQ9P2M7 1197 aaKnown RBP11.16□□□□□ -0.62
LRTOMT-201ENST00000289488 HERC5Q9UII4 1024 aaKnown RBP11.16□□□□□ -0.62
LRTOMT-201ENST00000289488 PLIN4Q96Q06 1357 aa11.16□□□□□ -0.62
LRTOMT-201ENST00000289488 SMTNL1A8MU46 457 aa11.15□□□□□ -0.62
LRTOMT-201ENST00000289488 PLCB2Q00722 1185 aa11.15□□□□□ -0.62
LRTOMT-201ENST00000289488 OTUD7BQ6GQQ9 843 aa11.15□□□□□ -0.62
LRTOMT-201ENST00000289488 USP17L2Q6R6M4 530 aa11.15□□□□□ -0.62
LRTOMT-201ENST00000289488 TMEM51Q9NW97 253 aa11.15□□□□□ -0.62
LRTOMT-201ENST00000289488 ATAD5Q96QE3 1844 aa11.15□□□□□ -0.62
LRTOMT-201ENST00000289488 USP17L5A8MUK1 530 aa11.15□□□□□ -0.62
LRTOMT-201ENST00000289488 PHF20L1A8MW92 1017 aa11.15□□□□□ -0.62
LRTOMT-201ENST00000289488 TTLL1O95922 423 aa11.15□□□□□ -0.62
LRTOMT-201ENST00000289488 EEF2P13639 858 aaKnown RBP11.15□□□□□ -0.62
LRTOMT-201ENST00000289488 GUCY1B3Q02153 619 aa11.15□□□□□ -0.62
LRTOMT-201ENST00000289488 LARP1BQ659C4 914 aaKnown RBP11.15□□□□□ -0.62
LRTOMT-201ENST00000289488 ANKS1AQ92625 1134 aa11.15□□□□□ -0.62
LRTOMT-201ENST00000289488 DDX41Q9UJV9 622 aaKnown RBP11.15□□□□□ -0.62
LRTOMT-201ENST00000289488 A0A1W2PRG0 241 aa11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 VPS37CA5D8V6 355 aaPredicted RBP11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 STX6O43752 255 aa11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 VEGFAP15692 232 aaPredicted RBP11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 ECE1P42892 770 aa11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 CDC37L1Q7L3B6 337 aa11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 FERMT3Q86UX7 667 aa11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 SPC24Q8NBT2 197 aa11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 SLC26A6Q9BXS9 759 aa11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 GLIS2Q9BZE0 524 aaPredicted RBP11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 TAF1DQ9H5J8 278 aaPredicted RBP11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 MAD2L2Q9UI95 211 aa11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 ATP6V1DQ9Y5K8 247 aa11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 SSC5DA1L4H1 1573 aa11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 FRMPD2Q68DX3 1309 aaPredicted RBP11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 DHX16O60231 1041 aaKnown RBP11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 INPP5BP32019 993 aa11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 NOVP48745 357 aa11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 ICA1Q05084 483 aa11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 FMR1Q06787 632 aaKnown RBP eCLIP11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 SLC35G1Q2M3R5 365 aa11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 KRT26Q7Z3Y9 468 aa11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 APOBEC3FQ8IUX4 373 aaKnown RBP11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 SRBD1Q8N5C6 995 aaKnown RBP11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 ACER1Q8TDN7 264 aa11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 ZKSCAN4Q969J2 545 aaPredicted RBP11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 CCDC17Q96LX7 622 aa11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 LLPHQ9BRT6 129 aaKnown RBP11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 ORC3Q9UBD5 711 aaPredicted RBP11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 SCN4AP35499 1836 aa11.14□□□□□ -0.63
LRTOMT-201ENST00000289488 TBC1D12O60347 775 aa11.13□□□□□ -0.63
LRTOMT-201ENST00000289488 DDAH1O94760 285 aa11.13□□□□□ -0.63
LRTOMT-201ENST00000289488 F13A1P00488 732 aa11.13□□□□□ -0.63
LRTOMT-201ENST00000289488 TOP1P11387 765 aaKnown RBP11.13□□□□□ -0.63
LRTOMT-201ENST00000289488 CAP2P40123 477 aa11.13□□□□□ -0.63
LRTOMT-201ENST00000289488 FUT2Q10981 343 aa11.13□□□□□ -0.63
LRTOMT-201ENST00000289488 TMEM179Q6ZVK1 233 aa11.13□□□□□ -0.63
LRTOMT-201ENST00000289488 SPICE1Q8N0Z3 855 aa11.13□□□□□ -0.63
LRTOMT-201ENST00000289488 CTCFLQ8NI51 663 aaPredicted RBP11.13□□□□□ -0.63
LRTOMT-201ENST00000289488 ZBTB21Q9ULJ3 1066 aa11.13□□□□□ -0.63
LRTOMT-201ENST00000289488 MORC2Q9Y6X9 1032 aaPredicted RBP11.13□□□□□ -0.63
LRTOMT-201ENST00000289488 FIBPO43427 364 aa11.13□□□□□ -0.63
LRTOMT-201ENST00000289488 SLFN14P0C7P3 912 aa11.13□□□□□ -0.63
LRTOMT-201ENST00000289488 CCDC192P0DO97 292 aa11.13□□□□□ -0.63
LRTOMT-201ENST00000289488 PDHBP11177 359 aa11.13□□□□□ -0.63
LRTOMT-201ENST00000289488 MAP3K10Q02779 954 aa11.13□□□□□ -0.63
LRTOMT-201ENST00000289488 DGKZQ13574 1117 aa11.13□□□□□ -0.63
LRTOMT-201ENST00000289488 ZYXQ15942 572 aaKnown RBP11.13□□□□□ -0.63
LRTOMT-201ENST00000289488 FAM173BQ6P4H8 233 aa11.13□□□□□ -0.63
LRTOMT-201ENST00000289488 DCPSQ96C86 337 aaKnown RBP11.13□□□□□ -0.63
LRTOMT-201ENST00000289488 NUP88Q99567 741 aaPredicted RBP11.13□□□□□ -0.63
LRTOMT-201ENST00000289488 KANSL2Q9H9L4 492 aa11.13□□□□□ -0.63
LRTOMT-201ENST00000289488 RRAGCQ9HB90 399 aa11.13□□□□□ -0.63
LRTOMT-201ENST00000289488 MTMR6Q9Y217 621 aa11.13□□□□□ -0.63
LRTOMT-201ENST00000289488 NID2Q14112 1375 aa11.13□□□□□ -0.63
LRTOMT-201ENST00000289488 ZC3H4Q9UPT8 1303 aaKnown RBP11.12□□□□□ -0.63
LRTOMT-201ENST00000289488 SMCHD1A6NHR9 2005 aa11.12□□□□□ -0.63
LRTOMT-201ENST00000289488 CYTH3O43739 400 aa11.12□□□□□ -0.63
LRTOMT-201ENST00000289488 IFNAR1P17181 557 aa11.12□□□□□ -0.63
LRTOMT-201ENST00000289488 PTGS1P23219 599 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms