RNA–Protein interactions for RNA: ENST00000288135.5

KIT-201, Transcript of KIT proto-oncogene receptor tyrosine kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KIT, Length 5,186 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIT-201ENST00000288135 ALAS1P13196 640 aa9.06□□□□□ -0.96
KIT-201ENST00000288135 RBM10P98175 930 aaKnown RBP9.06□□□□□ -0.96
KIT-201ENST00000288135 C11orf57Q6ZUT1 292 aaPredicted RBP9.06□□□□□ -0.96
KIT-201ENST00000288135 PRMT6Q96LA8 375 aaPredicted RBP9.06□□□□□ -0.96
KIT-201ENST00000288135 POLD4Q9HCU8 107 aa9.06□□□□□ -0.96
KIT-201ENST00000288135 USP17L10C9JJH3 530 aa9.06□□□□□ -0.96
KIT-201ENST00000288135 RASA1P20936 1047 aa9.06□□□□□ -0.96
KIT-201ENST00000288135 PRR16Q569H4 304 aa9.06□□□□□ -0.96
KIT-201ENST00000288135 USP17L15C9J2P7 530 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 USP17L13C9JLJ4 530 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 USP17L11C9JVI0 530 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 USP17L18D6R9N7 530 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 USP17L22D6RA61 530 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 USP17L17D6RBQ6 530 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 USP17L19D6RCP7 530 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 USP17L20D6RJB6 530 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 N4BP3O15049 544 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 USP17L24Q0WX57 530 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 PPP2R5BQ15173 497 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 DPCR1Q3MIW9 517 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 ATL3Q6DD88 541 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 NCAPH2Q6IBW4 605 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 USP17L6PQ6QN14 398 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 SGMS1Q86VZ5 419 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 ZFPM1Q8IX07 1006 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 KCNB2Q92953 911 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 PLSCR1O15162 318 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 BMP15O95972 392 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 MTIF2P46199 727 aaKnown RBP9.05□□□□□ -0.96
KIT-201ENST00000288135 POSTNQ15063 836 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 CALCRLQ16602 461 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 NOM1Q5C9Z4 860 aaKnown RBP9.05□□□□□ -0.96
KIT-201ENST00000288135 TCERG1LQ5VWI1 586 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 TBCKQ8TEA7 893 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 TMEM39BQ9GZU3 492 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 LRWD1Q9UFC0 647 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 PLEKHG2Q9H7P9 1386 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 PARP4Q9UKK3 1724 aaKnown RBP9.05□□□□□ -0.96
KIT-201ENST00000288135 PRPF3O43395 683 aaKnown RBP9.05□□□□□ -0.96
KIT-201ENST00000288135 NEMFO60524 1076 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 TAL1P17542 331 aaPredicted RBP9.05□□□□□ -0.96
KIT-201ENST00000288135 LONRF3Q496Y0 759 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 NBPF11Q86T75 865 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 SNX29Q8TEQ0 813 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 KIAA1468Q9P260 1216 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 CTNND2Q9UQB3 1225 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 PCDHA5Q9Y5H7 936 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 FLOT1O75955 427 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 CYP4A11Q02928 519 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 DGKHQ86XP1 1220 aa9.05□□□□□ -0.96
KIT-201ENST00000288135 PP2D1A8MPX8 630 aa9.04□□□□□ -0.96
KIT-201ENST00000288135 FOXN1O15353 648 aa9.04□□□□□ -0.96
KIT-201ENST00000288135 FOXP2O15409 715 aa9.04□□□□□ -0.96
KIT-201ENST00000288135 GJA10Q969M2 543 aa9.04□□□□□ -0.96
KIT-201ENST00000288135 RTFDC1Q9BY42 306 aaPredicted RBP9.04□□□□□ -0.96
KIT-201ENST00000288135 RRAGDQ9NQL2 400 aaPredicted RBP9.04□□□□□ -0.96
KIT-201ENST00000288135 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.04□□□□□ -0.96
KIT-201ENST00000288135 LRP6O75581 1613 aa9.04□□□□□ -0.96
KIT-201ENST00000288135 CBFA2T2O43439 604 aa9.04□□□□□ -0.96
KIT-201ENST00000288135 WDHD1O75717 1129 aaPredicted RBP9.04□□□□□ -0.96
KIT-201ENST00000288135 PCP11498 1178 aaKnown RBP9.04□□□□□ -0.96
KIT-201ENST00000288135 CMA1P23946 247 aa9.04□□□□□ -0.96
KIT-201ENST00000288135 KANK3Q6NY19 840 aa9.04□□□□□ -0.96
KIT-201ENST00000288135 CERS5Q8N5B7 392 aa9.04□□□□□ -0.96
KIT-201ENST00000288135 OSBPL5Q9H0X9 879 aaPredicted RBP9.04□□□□□ -0.96
KIT-201ENST00000288135 KANSL2Q9H9L4 492 aa9.04□□□□□ -0.96
KIT-201ENST00000288135 FZD1Q9UP38 647 aa9.04□□□□□ -0.96
KIT-201ENST00000288135 AFDNP55196 1824 aaKnown RBP9.04□□□□□ -0.96
KIT-201ENST00000288135 CACNB1Q02641 598 aaPredicted RBP9.04□□□□□ -0.96
KIT-201ENST00000288135 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.04□□□□□ -0.96
KIT-201ENST00000288135 USP49Q70CQ1 688 aa9.04□□□□□ -0.96
KIT-201ENST00000288135 PAGR1Q9BTK6 254 aa9.04□□□□□ -0.96
KIT-201ENST00000288135 DDX4Q9NQI0 724 aaKnown RBP9.04□□□□□ -0.96
KIT-201ENST00000288135 POLR3EQ9NVU0 708 aa9.04□□□□□ -0.96
KIT-201ENST00000288135 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.04□□□□□ -0.96
KIT-201ENST00000288135 GPR75-ASB3A0A0A6YYF3 556 aa9.04□□□□□ -0.96
KIT-201ENST00000288135 VEGFAP15692 232 aaPredicted RBP9.04□□□□□ -0.96
KIT-201ENST00000288135 RASSF7Q02833 373 aa9.04□□□□□ -0.96
KIT-201ENST00000288135 GRIN1Q05586 938 aa9.04□□□□□ -0.96
KIT-201ENST00000288135 WWC2Q6AWC2 1192 aa9.04□□□□□ -0.96
KIT-201ENST00000288135 KRT25Q7Z3Z0 450 aa9.04□□□□□ -0.96
KIT-201ENST00000288135 VPS16Q9H269 839 aa9.04□□□□□ -0.96
KIT-201ENST00000288135 FOXP1Q9H334 677 aaPredicted RBP9.04□□□□□ -0.96
KIT-201ENST00000288135 TNIP1Q15025 636 aa9.03□□□□□ -0.96
KIT-201ENST00000288135 STRIP1Q5VSL9 837 aa9.03□□□□□ -0.96
KIT-201ENST00000288135 FBXO11Q86XK2 927 aa9.03□□□□□ -0.96
KIT-201ENST00000288135 ZNF341Q9BYN7 854 aa9.03□□□□□ -0.96
KIT-201ENST00000288135 PCDHA4Q9UN74 947 aa9.03□□□□□ -0.96
KIT-201ENST00000288135 CACNA1FO60840 1977 aa9.03□□□□□ -0.96
KIT-201ENST00000288135 MATR3P43243 847 aaKnown RBP eCLIP9.03□□□□□ -0.96
KIT-201ENST00000288135 DNA2P51530 1060 aa9.03□□□□□ -0.96
KIT-201ENST00000288135 UVSSAQ2YD98 709 aa9.03□□□□□ -0.96
KIT-201ENST00000288135 FAM83BQ5T0W9 1011 aa9.03□□□□□ -0.96
KIT-201ENST00000288135 CABP7Q86V35 215 aa9.03□□□□□ -0.96
KIT-201ENST00000288135 DCAF8L1A6NGE4 600 aa9.03□□□□□ -0.96
KIT-201ENST00000288135 DDTLA6NHG4 134 aaPredicted RBP9.03□□□□□ -0.96
KIT-201ENST00000288135 PDE4DQ08499 809 aa9.03□□□□□ -0.96
KIT-201ENST00000288135 KRBA2Q6ZNG9 492 aa9.03□□□□□ -0.96
KIT-201ENST00000288135 NEK8Q86SG6 692 aa9.03□□□□□ -0.96
KIT-201ENST00000288135 NRBP1Q9UHY1 535 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms