RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 ARHGAP29Q52LW3 1261 aa20.86■□□□□ 0.93
PDLIM3-201ENST00000284767 CLIC6Q96NY7 704 aa20.86■□□□□ 0.93
PDLIM3-201ENST00000284767 TMX1Q9H3N1 280 aa20.86■□□□□ 0.93
PDLIM3-201ENST00000284767 GAKO14976 1311 aa20.86■□□□□ 0.93
PDLIM3-201ENST00000284767 DDAH1O94760 285 aa20.86■□□□□ 0.93
PDLIM3-201ENST00000284767 TSPY3P0CV98 308 aa20.86■□□□□ 0.93
PDLIM3-201ENST00000284767 TSPY8P0CW00 308 aa20.86■□□□□ 0.93
PDLIM3-201ENST00000284767 AKAP17AQ02040 695 aaKnown RBP20.86■□□□□ 0.93
PDLIM3-201ENST00000284767 CAMKK2Q96RR4 588 aa20.86■□□□□ 0.93
PDLIM3-201ENST00000284767 TTF2Q9UNY4 1162 aaKnown RBP20.86■□□□□ 0.93
PDLIM3-201ENST00000284767 RASA1P20936 1047 aa20.85■□□□□ 0.93
PDLIM3-201ENST00000284767 MYL5Q02045 173 aa20.85■□□□□ 0.93
PDLIM3-201ENST00000284767 LRRN4CLQ8ND94 238 aa20.85■□□□□ 0.93
PDLIM3-201ENST00000284767 SYKP43405 635 aa20.85■□□□□ 0.93
PDLIM3-201ENST00000284767 UBASH3AP57075 661 aa20.85■□□□□ 0.93
PDLIM3-201ENST00000284767 EARS2Q5JPH6 523 aaKnown RBP20.85■□□□□ 0.93
PDLIM3-201ENST00000284767 AMOTL1Q8IY63 956 aa20.85■□□□□ 0.93
PDLIM3-201ENST00000284767 JMYQ8N9B5 988 aa20.85■□□□□ 0.93
PDLIM3-201ENST00000284767 CTCFLQ8NI51 663 aaPredicted RBP20.85■□□□□ 0.93
PDLIM3-201ENST00000284767 UBXN4Q92575 508 aa20.85■□□□□ 0.93
PDLIM3-201ENST00000284767 FAM163AQ96GL9 167 aaPredicted RBP20.85■□□□□ 0.93
PDLIM3-201ENST00000284767 DNAI1Q9UI46 699 aa20.85■□□□□ 0.93
PDLIM3-201ENST00000284767 HPSEQ9Y251 543 aa20.85■□□□□ 0.93
PDLIM3-201ENST00000284767 CNTNAP5Q8WYK1 1306 aa20.85■□□□□ 0.93
PDLIM3-201ENST00000284767 ROBO3Q96MS0 1386 aa20.84■□□□□ 0.93
PDLIM3-201ENST00000284767 G3V3G9 751 aa20.84■□□□□ 0.93
PDLIM3-201ENST00000284767 PPP6R2O75170 966 aa20.84■□□□□ 0.93
PDLIM3-201ENST00000284767 TPM1P09493 284 aa20.84■□□□□ 0.93
PDLIM3-201ENST00000284767 SAFBQ15424 915 aaKnown RBP eCLIP20.84■□□□□ 0.93
PDLIM3-201ENST00000284767 NOM1Q5C9Z4 860 aaKnown RBP20.84■□□□□ 0.93
PDLIM3-201ENST00000284767 DCAF8Q5TAQ9 597 aa20.84■□□□□ 0.93
PDLIM3-201ENST00000284767 TRIM65Q6PJ69 517 aa20.84■□□□□ 0.93
PDLIM3-201ENST00000284767 ZNF444Q8N0Y2 327 aaPredicted RBP20.84■□□□□ 0.93
PDLIM3-201ENST00000284767 STAG2Q8N3U4 1231 aa20.84■□□□□ 0.93
PDLIM3-201ENST00000284767 STX8Q9UNK0 236 aa20.84■□□□□ 0.93
PDLIM3-201ENST00000284767 FAM237AA0A1B0GTK4 181 aa20.84■□□□□ 0.93
PDLIM3-201ENST00000284767 PRPF3O43395 683 aaKnown RBP20.84■□□□□ 0.93
PDLIM3-201ENST00000284767 CDK8P49336 464 aa20.84■□□□□ 0.93
PDLIM3-201ENST00000284767 PNMA1Q8ND90 353 aa20.84■□□□□ 0.93
PDLIM3-201ENST00000284767 KAT14Q9H8E8 782 aa20.84■□□□□ 0.93
PDLIM3-201ENST00000284767 RBM28Q9NW13 759 aaKnown RBP20.84■□□□□ 0.93
PDLIM3-201ENST00000284767 PCDHAC2Q9Y5I4 1007 aa20.84■□□□□ 0.93
PDLIM3-201ENST00000284767 ADAMTSL1Q8N6G6 1762 aa20.84■□□□□ 0.93
PDLIM3-201ENST00000284767 SLX4Q8IY92 1834 aa20.83■□□□□ 0.93
PDLIM3-201ENST00000284767 H0YIN7 160 aa20.83■□□□□ 0.93
PDLIM3-201ENST00000284767 PNMA6AP0CW24 399 aaPredicted RBP20.83■□□□□ 0.93
PDLIM3-201ENST00000284767 CALM1P0DP23 149 aa20.83■□□□□ 0.93
PDLIM3-201ENST00000284767 CALM2P0DP24 149 aa20.83■□□□□ 0.93
PDLIM3-201ENST00000284767 CALM3P0DP25 149 aa20.83■□□□□ 0.93
PDLIM3-201ENST00000284767 ATP1A3P13637 1013 aa20.83■□□□□ 0.93
PDLIM3-201ENST00000284767 DDX4Q9NQI0 724 aaKnown RBP20.83■□□□□ 0.93
PDLIM3-201ENST00000284767 ADAMTS3O15072 1205 aa20.83■□□□□ 0.92
PDLIM3-201ENST00000284767 ZSCAN12O43309 604 aa20.83■□□□□ 0.92
PDLIM3-201ENST00000284767 ZRANB2O95218 330 aaKnown RBP eCLIP20.83■□□□□ 0.92
PDLIM3-201ENST00000284767 SERPINC1P01008 464 aa20.83■□□□□ 0.92
PDLIM3-201ENST00000284767 SLURP2P0DP57 97 aa20.83■□□□□ 0.92
PDLIM3-201ENST00000284767 PPP2R5BQ15173 497 aa20.83■□□□□ 0.92
PDLIM3-201ENST00000284767 SPECC1Q5M775 1068 aa20.83■□□□□ 0.92
PDLIM3-201ENST00000284767 VSTM4Q8IW00 320 aa20.83■□□□□ 0.92
PDLIM3-201ENST00000284767 CABP5Q9NP86 173 aa20.83■□□□□ 0.92
PDLIM3-201ENST00000284767 TMCO3Q6UWJ1 677 aa20.82■□□□□ 0.92
PDLIM3-201ENST00000284767 MNS1Q8NEH6 495 aa20.82■□□□□ 0.92
PDLIM3-201ENST00000284767 TMX4Q9H1E5 349 aaPredicted RBP20.82■□□□□ 0.92
PDLIM3-201ENST00000284767 PCDHB6Q9Y5E3 794 aa20.82■□□□□ 0.92
PDLIM3-201ENST00000284767 UTRNP46939 3433 aa20.82■□□□□ 0.92
PDLIM3-201ENST00000284767 DDX60LQ5H9U9 1706 aaKnown RBP20.82■□□□□ 0.92
PDLIM3-201ENST00000284767 EFCAB8A8MWE9 144 aa20.82■□□□□ 0.92
PDLIM3-201ENST00000284767 GRIN1Q05586 938 aa20.82■□□□□ 0.92
PDLIM3-201ENST00000284767 SHC4Q6S5L8 630 aa20.82■□□□□ 0.92
PDLIM3-201ENST00000284767 DEFB132Q7Z7B7 95 aa20.82■□□□□ 0.92
PDLIM3-201ENST00000284767 FOXP1Q9H334 677 aaPredicted RBP20.82■□□□□ 0.92
PDLIM3-201ENST00000284767 ST7Q9NRC1 585 aa20.82■□□□□ 0.92
PDLIM3-201ENST00000284767 SNED1Q8TER0 1413 aa20.81■□□□□ 0.92
PDLIM3-201ENST00000284767 ATP8B1O43520 1251 aa20.81■□□□□ 0.92
PDLIM3-201ENST00000284767 CFAP100Q494V2 611 aa20.81■□□□□ 0.92
PDLIM3-201ENST00000284767 REXO1L1PQ8IX06 675 aa20.81■□□□□ 0.92
PDLIM3-201ENST00000284767 SLF2Q8IX21 1173 aa20.81■□□□□ 0.92
PDLIM3-201ENST00000284767 TADA3O75528 432 aa20.81■□□□□ 0.92
PDLIM3-201ENST00000284767 PLCG2P16885 1265 aa20.81■□□□□ 0.92
PDLIM3-201ENST00000284767 C16orf86Q6ZW13 317 aa20.81■□□□□ 0.92
PDLIM3-201ENST00000284767 DGKHQ86XP1 1220 aa20.81■□□□□ 0.92
PDLIM3-201ENST00000284767 EYA3Q99504 573 aa20.81■□□□□ 0.92
PDLIM3-201ENST00000284767 PHF20Q9BVI0 1012 aa20.81■□□□□ 0.92
PDLIM3-201ENST00000284767 CPVLQ9H3G5 476 aa20.81■□□□□ 0.92
PDLIM3-201ENST00000284767 STK32BQ9NY57 414 aa20.81■□□□□ 0.92
PDLIM3-201ENST00000284767 MYH1P12882 1939 aa20.8■□□□□ 0.92
PDLIM3-201ENST00000284767 WNT7AO00755 349 aa20.8■□□□□ 0.92
PDLIM3-201ENST00000284767 TOP1P11387 765 aaKnown RBP20.8■□□□□ 0.92
PDLIM3-201ENST00000284767 DPF2Q92785 391 aa20.8■□□□□ 0.92
PDLIM3-201ENST00000284767 CALCOCO1Q9P1Z2 691 aa20.8■□□□□ 0.92
PDLIM3-201ENST00000284767 GOLGA6L9A6NEM1 432 aa20.8■□□□□ 0.92
PDLIM3-201ENST00000284767 ARHGAP6O43182 974 aa20.8■□□□□ 0.92
PDLIM3-201ENST00000284767 GOLGA8HP0CJ92 632 aa20.8■□□□□ 0.92
PDLIM3-201ENST00000284767 NPY5RQ15761 445 aa20.8■□□□□ 0.92
PDLIM3-201ENST00000284767 SLC35G1Q2M3R5 365 aa20.8■□□□□ 0.92
PDLIM3-201ENST00000284767 TMEM47Q9BQJ4 181 aa20.8■□□□□ 0.92
PDLIM3-201ENST00000284767 CYP2C19P33261 490 aa20.79■□□□□ 0.92
PDLIM3-201ENST00000284767 PLA2G4AP47712 749 aa20.79■□□□□ 0.92
PDLIM3-201ENST00000284767 RESP18Q5W5W9 173 aa20.79■□□□□ 0.92
PDLIM3-201ENST00000284767 ISM2Q6H9L7 571 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 382 ms