RNA–Protein interactions for RNA: ENST00000279249.2

CDC42EP2-201, Transcript of CDC42 effector protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP2, Length 2,023 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP2-201ENST00000279249 NYAP2Q9P242 653 aa22.29■■□□□ 1.16
CDC42EP2-201ENST00000279249 CLEC11AQ9Y240 323 aa22.29■■□□□ 1.16
CDC42EP2-201ENST00000279249 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.29■■□□□ 1.16
CDC42EP2-201ENST00000279249 MAP1SQ66K74 1059 aaPredicted RBP22.28■■□□□ 1.16
CDC42EP2-201ENST00000279249 CDC37L1Q7L3B6 337 aa22.28■■□□□ 1.16
CDC42EP2-201ENST00000279249 FANCBQ8NB91 859 aa22.28■■□□□ 1.16
CDC42EP2-201ENST00000279249 RTN1Q16799 776 aa22.28■■□□□ 1.16
CDC42EP2-201ENST00000279249 FOXD4L5Q5VV16 416 aaPredicted RBP22.28■■□□□ 1.16
CDC42EP2-201ENST00000279249 FOXD4L4Q8WXT5 416 aaPredicted RBP22.28■■□□□ 1.16
CDC42EP2-201ENST00000279249 KLRG1Q96E93 195 aa22.28■■□□□ 1.16
CDC42EP2-201ENST00000279249 USP25Q9UHP3 1055 aa22.28■■□□□ 1.16
CDC42EP2-201ENST00000279249 CTNND1O60716 968 aaKnown RBP22.27■■□□□ 1.16
CDC42EP2-201ENST00000279249 USP2O75604 605 aaPredicted RBP22.27■■□□□ 1.16
CDC42EP2-201ENST00000279249 UBE2HP62256 183 aa22.27■■□□□ 1.16
CDC42EP2-201ENST00000279249 ATP2B2Q01814 1243 aa22.27■■□□□ 1.16
CDC42EP2-201ENST00000279249 NTRK3Q16288 839 aa22.27■■□□□ 1.16
CDC42EP2-201ENST00000279249 SMARCC2Q8TAQ2 1214 aa22.27■■□□□ 1.16
CDC42EP2-201ENST00000279249 MKL1Q969V6 931 aa22.27■■□□□ 1.16
CDC42EP2-201ENST00000279249 WRNIP1Q96S55 665 aa22.27■■□□□ 1.16
CDC42EP2-201ENST00000279249 GADD45BO75293 160 aaPredicted RBP22.26■■□□□ 1.15
CDC42EP2-201ENST00000279249 CALM1P0DP23 149 aa22.26■■□□□ 1.15
CDC42EP2-201ENST00000279249 CALM2P0DP24 149 aa22.26■■□□□ 1.15
CDC42EP2-201ENST00000279249 CALM3P0DP25 149 aa22.26■■□□□ 1.15
CDC42EP2-201ENST00000279249 PRKG1Q13976 671 aa22.26■■□□□ 1.15
CDC42EP2-201ENST00000279249 PPP4R3BQ5MIZ7 849 aa22.26■■□□□ 1.15
CDC42EP2-201ENST00000279249 CCDC84Q86UT8 332 aaPredicted RBP22.26■■□□□ 1.15
CDC42EP2-201ENST00000279249 LDHDQ86WU2 507 aa22.26■■□□□ 1.15
CDC42EP2-201ENST00000279249 LLPHQ9BRT6 129 aaKnown RBP22.26■■□□□ 1.15
CDC42EP2-201ENST00000279249 SMC3Q9UQE7 1217 aa22.26■■□□□ 1.15
CDC42EP2-201ENST00000279249 A0A1W2PRG0 241 aa22.26■■□□□ 1.15
CDC42EP2-201ENST00000279249 PPFIA3O75145 1194 aa22.26■■□□□ 1.15
CDC42EP2-201ENST00000279249 ASNSP08243 561 aa22.26■■□□□ 1.15
CDC42EP2-201ENST00000279249 MTMR7Q9Y216 660 aa22.26■■□□□ 1.15
CDC42EP2-201ENST00000279249 BAZ2BQ9UIF8 2168 aaKnown RBP22.25■■□□□ 1.15
CDC42EP2-201ENST00000279249 PTPDC1A2A3K4 754 aa22.25■■□□□ 1.15
CDC42EP2-201ENST00000279249 GJB2P29033 226 aa22.25■■□□□ 1.15
CDC42EP2-201ENST00000279249 GRM4Q14833 912 aa22.25■■□□□ 1.15
CDC42EP2-201ENST00000279249 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.25■■□□□ 1.15
CDC42EP2-201ENST00000279249 ZKSCAN4Q969J2 545 aaPredicted RBP22.25■■□□□ 1.15
CDC42EP2-201ENST00000279249 CHMP4CQ96CF2 233 aa22.25■■□□□ 1.15
CDC42EP2-201ENST00000279249 MAP3K14Q99558 947 aa22.25■■□□□ 1.15
CDC42EP2-201ENST00000279249 ACER1Q8TDN7 264 aa22.24■■□□□ 1.15
CDC42EP2-201ENST00000279249 ATP6V1DQ9Y5K8 247 aa22.24■■□□□ 1.15
CDC42EP2-201ENST00000279249 TCHHQ07283 1943 aa22.24■■□□□ 1.15
CDC42EP2-201ENST00000279249 TRAF5O00463 557 aa22.24■■□□□ 1.15
CDC42EP2-201ENST00000279249 PLEKHA8P1O95397 391 aa22.24■■□□□ 1.15
CDC42EP2-201ENST00000279249 ECE1P42892 770 aa22.24■■□□□ 1.15
CDC42EP2-201ENST00000279249 FMR1Q06787 632 aaKnown RBP eCLIP22.24■■□□□ 1.15
CDC42EP2-201ENST00000279249 SCYL3Q8IZE3 742 aa22.24■■□□□ 1.15
CDC42EP2-201ENST00000279249 CMTR1Q8N1G2 835 aaKnown RBP22.24■■□□□ 1.15
CDC42EP2-201ENST00000279249 KIAA1524Q8TCG1 905 aa22.24■■□□□ 1.15
CDC42EP2-201ENST00000279249 GINM1Q9NU53 330 aa22.24■■□□□ 1.15
CDC42EP2-201ENST00000279249 MAD2L2Q9UI95 211 aa22.24■■□□□ 1.15
CDC42EP2-201ENST00000279249 CPLX1O14810 134 aa22.23■■□□□ 1.15
CDC42EP2-201ENST00000279249 DHX16O60231 1041 aaKnown RBP22.23■■□□□ 1.15
CDC42EP2-201ENST00000279249 SNHG28P0DPA3 235 aa22.23■■□□□ 1.15
CDC42EP2-201ENST00000279249 PDHBP11177 359 aa22.23■■□□□ 1.15
CDC42EP2-201ENST00000279249 PPP2R5BQ15173 497 aa22.23■■□□□ 1.15
CDC42EP2-201ENST00000279249 STAG2Q8N3U4 1231 aa22.23■■□□□ 1.15
CDC42EP2-201ENST00000279249 CTCFLQ8NI51 663 aaPredicted RBP22.23■■□□□ 1.15
CDC42EP2-201ENST00000279249 DDX11Q96FC9 970 aa22.23■■□□□ 1.15
CDC42EP2-201ENST00000279249 RBM28Q9NW13 759 aaKnown RBP22.23■■□□□ 1.15
CDC42EP2-201ENST00000279249 USP17L5A8MUK1 530 aa22.23■■□□□ 1.15
CDC42EP2-201ENST00000279249 FDPSP14324 419 aaKnown RBP22.23■■□□□ 1.15
CDC42EP2-201ENST00000279249 FUT2Q10981 343 aa22.23■■□□□ 1.15
CDC42EP2-201ENST00000279249 TMTC3Q6ZXV5 915 aa22.23■■□□□ 1.15
CDC42EP2-201ENST00000279249 NBPF11Q86T75 865 aa22.23■■□□□ 1.15
CDC42EP2-201ENST00000279249 ANKRD7Q92527 254 aa22.23■■□□□ 1.15
CDC42EP2-201ENST00000279249 FUCA2Q9BTY2 467 aa22.23■■□□□ 1.15
CDC42EP2-201ENST00000279249 PRDM10Q9NQV6 1147 aa22.23■■□□□ 1.15
CDC42EP2-201ENST00000279249 CCDC196A0A1B0GTZ2 297 aa22.22■■□□□ 1.15
CDC42EP2-201ENST00000279249 GOLGA6L6A8MZA4 724 aa22.22■■□□□ 1.15
CDC42EP2-201ENST00000279249 SYCP1Q15431 976 aa22.22■■□□□ 1.15
CDC42EP2-201ENST00000279249 NOL9Q5SY16 702 aaKnown RBP22.22■■□□□ 1.15
CDC42EP2-201ENST00000279249 USP17L2Q6R6M4 530 aa22.22■■□□□ 1.15
CDC42EP2-201ENST00000279249 PHKBQ93100 1093 aa22.22■■□□□ 1.15
CDC42EP2-201ENST00000279249 TTC12Q9H892 705 aaPredicted RBP22.22■■□□□ 1.15
CDC42EP2-201ENST00000279249 TRPM7Q96QT4 1865 aa22.22■■□□□ 1.15
CDC42EP2-201ENST00000279249 PALM3A6NDB9 673 aaPredicted RBP22.21■■□□□ 1.15
CDC42EP2-201ENST00000279249 CTIFO43310 598 aaKnown RBP22.21■■□□□ 1.15
CDC42EP2-201ENST00000279249 ZSCAN22P10073 491 aaPredicted RBP22.21■■□□□ 1.15
CDC42EP2-201ENST00000279249 IFNAR1P17181 557 aa22.21■■□□□ 1.15
CDC42EP2-201ENST00000279249 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.21■■□□□ 1.15
CDC42EP2-201ENST00000279249 ARHGEF10LQ9HCE6 1279 aa22.21■■□□□ 1.15
CDC42EP2-201ENST00000279249 TMX2Q9Y320 296 aa22.21■■□□□ 1.15
CDC42EP2-201ENST00000279249 PTPRFP10586 1907 aa22.21■■□□□ 1.15
CDC42EP2-201ENST00000279249 PPP1R12BO60237 982 aaPredicted RBP22.21■■□□□ 1.15
CDC42EP2-201ENST00000279249 GOLGA8HP0CJ92 632 aa22.21■■□□□ 1.15
CDC42EP2-201ENST00000279249 NF2P35240 595 aa22.21■■□□□ 1.15
CDC42EP2-201ENST00000279249 SLC35G1Q2M3R5 365 aa22.21■■□□□ 1.15
CDC42EP2-201ENST00000279249 MOB2Q70IA6 237 aa22.21■■□□□ 1.15
CDC42EP2-201ENST00000279249 PDCL2Q8N4E4 241 aa22.21■■□□□ 1.15
CDC42EP2-201ENST00000279249 SRBD1Q8N5C6 995 aaKnown RBP22.21■■□□□ 1.15
CDC42EP2-201ENST00000279249 GMCL1P1Q8NEA9 526 aa22.21■■□□□ 1.15
CDC42EP2-201ENST00000279249 SYNPO2Q9UMS6 1093 aa22.21■■□□□ 1.15
CDC42EP2-201ENST00000279249 KIF5BP33176 963 aa22.2■■□□□ 1.14
CDC42EP2-201ENST00000279249 KIAA1755Q5JYT7 1200 aa22.2■■□□□ 1.14
CDC42EP2-201ENST00000279249 CCDC82Q8N4S0 544 aa22.2■■□□□ 1.14
CDC42EP2-201ENST00000279249 FEZ1Q99689 392 aa22.2■■□□□ 1.14
CDC42EP2-201ENST00000279249 CNTNAP5Q8WYK1 1306 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms