RNA–Protein interactions for RNA: ENST00000272238.8

ATP6V1C2-201, Transcript of ATPase H+ transporting V1 subunit C2, humanhuman

TSL 5 BASIC

Gene ATP6V1C2, Length 1,565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C2-201ENST00000272238 USP17L18D6R9N7 530 aa18.24■□□□□ 0.51
ATP6V1C2-201ENST00000272238 USP17L22D6RA61 530 aa18.24■□□□□ 0.51
ATP6V1C2-201ENST00000272238 USP17L17D6RBQ6 530 aa18.24■□□□□ 0.51
ATP6V1C2-201ENST00000272238 USP17L19D6RCP7 530 aa18.24■□□□□ 0.51
ATP6V1C2-201ENST00000272238 USP17L20D6RJB6 530 aa18.24■□□□□ 0.51
ATP6V1C2-201ENST00000272238 HMGB1P09429 215 aaKnown RBP18.24■□□□□ 0.51
ATP6V1C2-201ENST00000272238 OSBPP22059 807 aa18.24■□□□□ 0.51
ATP6V1C2-201ENST00000272238 RPS6KB1P23443 525 aa18.24■□□□□ 0.51
ATP6V1C2-201ENST00000272238 USP17L24Q0WX57 530 aa18.24■□□□□ 0.51
ATP6V1C2-201ENST00000272238 IKQ13123 557 aaPredicted RBP18.24■□□□□ 0.51
ATP6V1C2-201ENST00000272238 TMEM87BQ96K49 555 aa18.24■□□□□ 0.51
ATP6V1C2-201ENST00000272238 R3HDMLQ9H3Y0 253 aa18.24■□□□□ 0.51
ATP6V1C2-201ENST00000272238 FBXO28Q9NVF7 368 aa18.24■□□□□ 0.51
ATP6V1C2-201ENST00000272238 BMP3P12645 472 aa18.23■□□□□ 0.51
ATP6V1C2-201ENST00000272238 IGDCC4Q8TDY8 1250 aa18.23■□□□□ 0.51
ATP6V1C2-201ENST00000272238 NUP133Q8WUM0 1156 aa18.23■□□□□ 0.51
ATP6V1C2-201ENST00000272238 ZFYVE28Q9HCC9 887 aa18.23■□□□□ 0.51
ATP6V1C2-201ENST00000272238 NAP1L2Q9ULW6 460 aaPredicted RBP18.23■□□□□ 0.51
ATP6V1C2-201ENST00000272238 SYNPO2Q9UMS6 1093 aa18.23■□□□□ 0.51
ATP6V1C2-201ENST00000272238 CYP46A1Q9Y6A2 500 aa18.23■□□□□ 0.51
ATP6V1C2-201ENST00000272238 CCDC69A6NI79 296 aa18.22■□□□□ 0.51
ATP6V1C2-201ENST00000272238 CA12O43570 354 aa18.22■□□□□ 0.51
ATP6V1C2-201ENST00000272238 PEX10O60683 326 aa18.22■□□□□ 0.51
ATP6V1C2-201ENST00000272238 GOLGA8HP0CJ92 632 aa18.22■□□□□ 0.51
ATP6V1C2-201ENST00000272238 PDHBP11177 359 aa18.22■□□□□ 0.51
ATP6V1C2-201ENST00000272238 ANAPC15P60006 121 aa18.22■□□□□ 0.51
ATP6V1C2-201ENST00000272238 CATSPERGQ6ZRH7 1159 aa18.22■□□□□ 0.51
ATP6V1C2-201ENST00000272238 Q6ZUG5 572 aa18.22■□□□□ 0.51
ATP6V1C2-201ENST00000272238 RUFY3Q7L099 469 aa18.22■□□□□ 0.51
ATP6V1C2-201ENST00000272238 PAGR1Q9BTK6 254 aa18.22■□□□□ 0.51
ATP6V1C2-201ENST00000272238 ZCCHC17Q9NP64 241 aaKnown RBP18.22■□□□□ 0.51
ATP6V1C2-201ENST00000272238 CPA4Q9UI42 421 aa18.22■□□□□ 0.51
ATP6V1C2-201ENST00000272238 SLC45A1Q9Y2W3 748 aa18.22■□□□□ 0.51
ATP6V1C2-201ENST00000272238 RXRAP19793 462 aa18.21■□□□□ 0.51
ATP6V1C2-201ENST00000272238 HOXA7P31268 230 aaPredicted RBP18.21■□□□□ 0.51
ATP6V1C2-201ENST00000272238 HERVK_113P62684 666 aa18.21■□□□□ 0.51
ATP6V1C2-201ENST00000272238 EXOSC10Q01780 885 aaKnown RBP18.21■□□□□ 0.51
ATP6V1C2-201ENST00000272238 DCAF4Q8WV16 495 aa18.21■□□□□ 0.51
ATP6V1C2-201ENST00000272238 GMCL1Q96IK5 515 aa18.21■□□□□ 0.51
ATP6V1C2-201ENST00000272238 P2RX7Q99572 595 aaKnown RBP18.21■□□□□ 0.51
ATP6V1C2-201ENST00000272238 GPCPD1Q9NPB8 672 aa18.21■□□□□ 0.51
ATP6V1C2-201ENST00000272238 SAGE1Q9NXZ1 904 aa18.21■□□□□ 0.51
ATP6V1C2-201ENST00000272238 WDR19Q8NEZ3 1342 aa18.21■□□□□ 0.51
ATP6V1C2-201ENST00000272238 SPDYE16A6NNV3 312 aaPredicted RBP18.21■□□□□ 0.51
ATP6V1C2-201ENST00000272238 TMEM232C9JQI7 657 aa18.21■□□□□ 0.51
ATP6V1C2-201ENST00000272238 CATIPQ7Z7H3 387 aa18.21■□□□□ 0.51
ATP6V1C2-201ENST00000272238 MICU3Q86XE3 530 aa18.21■□□□□ 0.51
ATP6V1C2-201ENST00000272238 CCDC144CPQ8IYA2 1237 aa18.21■□□□□ 0.51
ATP6V1C2-201ENST00000272238 ZNF654Q8IZM8 581 aa18.21■□□□□ 0.51
ATP6V1C2-201ENST00000272238 ANKS1AQ92625 1134 aa18.21■□□□□ 0.51
ATP6V1C2-201ENST00000272238 BRF1Q92994 677 aa18.21■□□□□ 0.51
ATP6V1C2-201ENST00000272238 KIFC2Q96AC6 838 aa18.21■□□□□ 0.51
ATP6V1C2-201ENST00000272238 ZSWIM6Q9HCJ5 1215 aa18.21■□□□□ 0.51
ATP6V1C2-201ENST00000272238 FOXN1O15353 648 aa18.2■□□□□ 0.5
ATP6V1C2-201ENST00000272238 STAT2P52630 851 aa18.2■□□□□ 0.5
ATP6V1C2-201ENST00000272238 NOL8Q76FK4 1167 aaKnown RBP18.2■□□□□ 0.5
ATP6V1C2-201ENST00000272238 ANKRD13CQ8N6S4 541 aa18.2■□□□□ 0.5
ATP6V1C2-201ENST00000272238 ATG4CQ96DT6 458 aa18.2■□□□□ 0.5
ATP6V1C2-201ENST00000272238 SLF1Q9BQI6 1058 aa18.2■□□□□ 0.5
ATP6V1C2-201ENST00000272238 CPVLQ9H3G5 476 aa18.2■□□□□ 0.5
ATP6V1C2-201ENST00000272238 ADGRA2Q96PE1 1338 aa18.2■□□□□ 0.5
ATP6V1C2-201ENST00000272238 TLR2O60603 784 aa18.19■□□□□ 0.5
ATP6V1C2-201ENST00000272238 SLC16A2P36021 539 aa18.19■□□□□ 0.5
ATP6V1C2-201ENST00000272238 ZNF543Q08ER8 600 aa18.19■□□□□ 0.5
ATP6V1C2-201ENST00000272238 APOBRQ0VD83 1088 aa18.19■□□□□ 0.5
ATP6V1C2-201ENST00000272238 TTBK2Q6IQ55 1244 aa18.19■□□□□ 0.5
ATP6V1C2-201ENST00000272238 LARP6Q9BRS8 491 aaKnown RBP18.19■□□□□ 0.5
ATP6V1C2-201ENST00000272238 MTA3Q9BTC8 594 aa18.19■□□□□ 0.5
ATP6V1C2-201ENST00000272238 TM6SF1Q9BZW5 370 aa18.19■□□□□ 0.5
ATP6V1C2-201ENST00000272238 PDRG1Q9NUG6 133 aa18.19■□□□□ 0.5
ATP6V1C2-201ENST00000272238 SLC12A7Q9Y666 1083 aa18.19■□□□□ 0.5
ATP6V1C2-201ENST00000272238 KLF18A0A0U1RQI7 1052 aa18.18■□□□□ 0.5
ATP6V1C2-201ENST00000272238 PARP1P09874 1014 aaKnown RBP18.18■□□□□ 0.5
ATP6V1C2-201ENST00000272238 LIFRP42702 1097 aa18.18■□□□□ 0.5
ATP6V1C2-201ENST00000272238 COG2Q14746 738 aa18.18■□□□□ 0.5
ATP6V1C2-201ENST00000272238 PPP1R9AQ9ULJ8 1098 aa18.18■□□□□ 0.5
ATP6V1C2-201ENST00000272238 MGAMO43451 1857 aa18.18■□□□□ 0.5
ATP6V1C2-201ENST00000272238 MYH6P13533 1939 aa18.18■□□□□ 0.5
ATP6V1C2-201ENST00000272238 SNHG28P0DPA3 235 aa18.17■□□□□ 0.5
ATP6V1C2-201ENST00000272238 RBM25P49756 843 aaKnown RBP18.17■□□□□ 0.5
ATP6V1C2-201ENST00000272238 STAG2Q8N3U4 1231 aa18.17■□□□□ 0.5
ATP6V1C2-201ENST00000272238 TXNRD2Q9NNW7 524 aa18.17■□□□□ 0.5
ATP6V1C2-201ENST00000272238 FEM1BQ9UK73 627 aa18.17■□□□□ 0.5
ATP6V1C2-201ENST00000272238 BRPF3Q9ULD4 1205 aa18.17■□□□□ 0.5
ATP6V1C2-201ENST00000272238 GOLGA8BA8MQT2 603 aa18.17■□□□□ 0.5
ATP6V1C2-201ENST00000272238 DHX16O60231 1041 aaKnown RBP18.17■□□□□ 0.5
ATP6V1C2-201ENST00000272238 DDAH1O94760 285 aa18.17■□□□□ 0.5
ATP6V1C2-201ENST00000272238 DSG3P32926 999 aa18.17■□□□□ 0.5
ATP6V1C2-201ENST00000272238 SNAP25P60880 206 aa18.17■□□□□ 0.5
ATP6V1C2-201ENST00000272238 TROAPQ12815 778 aa18.17■□□□□ 0.5
ATP6V1C2-201ENST00000272238 APOA5Q6Q788 366 aa18.17■□□□□ 0.5
ATP6V1C2-201ENST00000272238 SYNE3Q6ZMZ3 975 aa18.17■□□□□ 0.5
ATP6V1C2-201ENST00000272238 SGMS1Q86VZ5 419 aa18.17■□□□□ 0.5
ATP6V1C2-201ENST00000272238 TBC1D32Q96NH3 1257 aa18.17■□□□□ 0.5
ATP6V1C2-201ENST00000272238 CASP8AP2Q9UKL3 1982 aa18.16■□□□□ 0.5
ATP6V1C2-201ENST00000272238 GPR25O00155 361 aa18.16■□□□□ 0.5
ATP6V1C2-201ENST00000272238 HSPA8P11142 646 aaKnown RBP18.16■□□□□ 0.5
ATP6V1C2-201ENST00000272238 SLC4A3P48751 1232 aa18.16■□□□□ 0.5
ATP6V1C2-201ENST00000272238 NEK4P51957 841 aa18.16■□□□□ 0.5
ATP6V1C2-201ENST00000272238 TOB2Q14106 344 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms