RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 FAM193AP78312 1265 aa16■□□□□ 0.15
TNFRSF11A-201ENST00000269485 UVSSAQ2YD98 709 aa16■□□□□ 0.15
TNFRSF11A-201ENST00000269485 TOGARAM1Q9Y4F4 1720 aa16■□□□□ 0.15
TNFRSF11A-201ENST00000269485 RBAK-RBAKDNI3L0D1 243 aa16■□□□□ 0.15
TNFRSF11A-201ENST00000269485 WNT7AO00755 349 aa16■□□□□ 0.15
TNFRSF11A-201ENST00000269485 NFIAQ12857 509 aa16■□□□□ 0.15
TNFRSF11A-201ENST00000269485 LEKR1Q6ZMV7 388 aa16■□□□□ 0.15
TNFRSF11A-201ENST00000269485 KCNG1Q9UIX4 513 aa16■□□□□ 0.15
TNFRSF11A-201ENST00000269485 PPEF1O14829 653 aaPredicted RBP16■□□□□ 0.15
TNFRSF11A-201ENST00000269485 CLGNO14967 610 aa16■□□□□ 0.15
TNFRSF11A-201ENST00000269485 EZH2Q15910 746 aaKnown RBP16■□□□□ 0.15
TNFRSF11A-201ENST00000269485 FKBP15Q5T1M5 1219 aa16■□□□□ 0.15
TNFRSF11A-201ENST00000269485 SPTY2D1Q68D10 685 aaPredicted RBP16■□□□□ 0.15
TNFRSF11A-201ENST00000269485 TTBK2Q6IQ55 1244 aa16■□□□□ 0.15
TNFRSF11A-201ENST00000269485 SRBD1Q8N5C6 995 aaKnown RBP16■□□□□ 0.15
TNFRSF11A-201ENST00000269485 RIOK1Q9BRS2 568 aaKnown RBP16■□□□□ 0.15
TNFRSF11A-201ENST00000269485 TMEM260Q9NX78 707 aa16■□□□□ 0.15
TNFRSF11A-201ENST00000269485 CNTNAP4Q9C0A0 1308 aa15.99■□□□□ 0.15
TNFRSF11A-201ENST00000269485 MYO1CO00159 1063 aa15.99■□□□□ 0.15
TNFRSF11A-201ENST00000269485 DEXIO95424 95 aa15.99■□□□□ 0.15
TNFRSF11A-201ENST00000269485 PROM2Q8N271 834 aa15.99■□□□□ 0.15
TNFRSF11A-201ENST00000269485 WASF1Q92558 559 aa15.99■□□□□ 0.15
TNFRSF11A-201ENST00000269485 PIGSQ96S52 555 aa15.99■□□□□ 0.15
TNFRSF11A-201ENST00000269485 DESI2Q9BSY9 194 aa15.99■□□□□ 0.15
TNFRSF11A-201ENST00000269485 ZNF277Q9NRM2 450 aaPredicted RBP15.99■□□□□ 0.15
TNFRSF11A-201ENST00000269485 DDX39AO00148 427 aaKnown RBP15.99■□□□□ 0.15
TNFRSF11A-201ENST00000269485 TECP42680 631 aa15.99■□□□□ 0.15
TNFRSF11A-201ENST00000269485 PTPROQ16827 1216 aa15.99■□□□□ 0.15
TNFRSF11A-201ENST00000269485 SH2D3AQ9BRG2 576 aa15.99■□□□□ 0.15
TNFRSF11A-201ENST00000269485 MROH7-TTC4A0A0A0MT08 1334 aa15.99■□□□□ 0.15
TNFRSF11A-201ENST00000269485 CTIFO43310 598 aaKnown RBP15.98■□□□□ 0.15
TNFRSF11A-201ENST00000269485 PHACTR2O75167 634 aa15.98■□□□□ 0.15
TNFRSF11A-201ENST00000269485 LDHCP07864 332 aa15.98■□□□□ 0.15
TNFRSF11A-201ENST00000269485 SFPQP23246 707 aaKnown RBP eCLIP15.98■□□□□ 0.15
TNFRSF11A-201ENST00000269485 ZSCAN26Q16670 478 aa15.98■□□□□ 0.15
TNFRSF11A-201ENST00000269485 LARGE2Q8N3Y3 721 aa15.98■□□□□ 0.15
TNFRSF11A-201ENST00000269485 UBXN4Q92575 508 aa15.98■□□□□ 0.15
TNFRSF11A-201ENST00000269485 BCS1LQ9Y276 419 aa15.98■□□□□ 0.15
TNFRSF11A-201ENST00000269485 USP17L5A8MUK1 530 aa15.98■□□□□ 0.15
TNFRSF11A-201ENST00000269485 ZNF76P36508 570 aa15.98■□□□□ 0.15
TNFRSF11A-201ENST00000269485 TTC38Q5R3I4 469 aa15.98■□□□□ 0.15
TNFRSF11A-201ENST00000269485 FBXO33Q7Z6M2 555 aa15.98■□□□□ 0.15
TNFRSF11A-201ENST00000269485 WDR66Q8TBY9 1149 aa15.98■□□□□ 0.15
TNFRSF11A-201ENST00000269485 KANSL2Q9H9L4 492 aa15.98■□□□□ 0.15
TNFRSF11A-201ENST00000269485 KIAA1468Q9P260 1216 aa15.98■□□□□ 0.15
TNFRSF11A-201ENST00000269485 PAXBP1Q9Y5B6 917 aa15.98■□□□□ 0.15
TNFRSF11A-201ENST00000269485 ZNF75DP51815 510 aa15.98■□□□□ 0.15
TNFRSF11A-201ENST00000269485 LRRN4CLQ8ND94 238 aa15.98■□□□□ 0.15
TNFRSF11A-201ENST00000269485 SYMPKQ92797 1274 aaKnown RBP15.98■□□□□ 0.15
TNFRSF11A-201ENST00000269485 RABEP2Q9H5N1 569 aa15.98■□□□□ 0.15
TNFRSF11A-201ENST00000269485 USP54Q70EL1 1684 aa15.98■□□□□ 0.15
TNFRSF11A-201ENST00000269485 SIPA1L3O60292 1781 aaPredicted RBP15.98■□□□□ 0.15
TNFRSF11A-201ENST00000269485 CALM1P0DP23 149 aa15.97■□□□□ 0.15
TNFRSF11A-201ENST00000269485 CALM2P0DP24 149 aa15.97■□□□□ 0.15
TNFRSF11A-201ENST00000269485 CALM3P0DP25 149 aa15.97■□□□□ 0.15
TNFRSF11A-201ENST00000269485 RXRBP28702 533 aa15.97■□□□□ 0.15
TNFRSF11A-201ENST00000269485 ARID5AQ03989 594 aa15.97■□□□□ 0.15
TNFRSF11A-201ENST00000269485 CCDC174Q6PII3 467 aa15.97■□□□□ 0.15
TNFRSF11A-201ENST00000269485 SHC4Q6S5L8 630 aa15.97■□□□□ 0.15
TNFRSF11A-201ENST00000269485 CEP95Q96GE4 821 aa15.97■□□□□ 0.15
TNFRSF11A-201ENST00000269485 NFE2L3Q9Y4A8 694 aa15.97■□□□□ 0.15
TNFRSF11A-201ENST00000269485 TMEM232C9JQI7 657 aa15.97■□□□□ 0.15
TNFRSF11A-201ENST00000269485 TOP1P11387 765 aaKnown RBP15.97■□□□□ 0.15
TNFRSF11A-201ENST00000269485 WDR78Q5VTH9 848 aa15.97■□□□□ 0.15
TNFRSF11A-201ENST00000269485 TBC1D16Q8TBP0 767 aa15.97■□□□□ 0.15
TNFRSF11A-201ENST00000269485 DOT1LQ8TEK3 1739 aa15.97■□□□□ 0.15
TNFRSF11A-201ENST00000269485 SPATA31A6Q5VVP1 1343 aa15.97■□□□□ 0.15
TNFRSF11A-201ENST00000269485 H0YIN7 160 aa15.97■□□□□ 0.15
TNFRSF11A-201ENST00000269485 TM4SF1P30408 202 aa15.97■□□□□ 0.15
TNFRSF11A-201ENST00000269485 NAP1L1P55209 391 aaKnown RBP15.97■□□□□ 0.15
TNFRSF11A-201ENST00000269485 ADALQ6DHV7 355 aa15.97■□□□□ 0.15
TNFRSF11A-201ENST00000269485 LZTFL1Q9NQ48 299 aa15.97■□□□□ 0.15
TNFRSF11A-201ENST00000269485 SAMSN1Q9NSI8 373 aaKnown RBP15.97■□□□□ 0.15
TNFRSF11A-201ENST00000269485 FAM217BQ9NTX9 383 aaPredicted RBP15.97■□□□□ 0.15
TNFRSF11A-201ENST00000269485 RCOR1Q9UKL0 485 aa15.97■□□□□ 0.15
TNFRSF11A-201ENST00000269485 PKD1L3Q7Z443 1732 aa15.97■□□□□ 0.15
TNFRSF11A-201ENST00000269485 STAT6P42226 847 aa15.96■□□□□ 0.15
TNFRSF11A-201ENST00000269485 KCTD19Q17RG1 926 aaPredicted RBP15.96■□□□□ 0.15
TNFRSF11A-201ENST00000269485 ZFPM1Q8IX07 1006 aa15.96■□□□□ 0.15
TNFRSF11A-201ENST00000269485 MYCBPQ99417 103 aaPredicted RBP15.96■□□□□ 0.15
TNFRSF11A-201ENST00000269485 ITGB4P16144 1822 aa15.96■□□□□ 0.15
TNFRSF11A-201ENST00000269485 PARP1P09874 1014 aaKnown RBP15.96■□□□□ 0.15
TNFRSF11A-201ENST00000269485 KIF5BP33176 963 aa15.96■□□□□ 0.15
TNFRSF11A-201ENST00000269485 CTNND2Q9UQB3 1225 aa15.96■□□□□ 0.14
TNFRSF11A-201ENST00000269485 CTDP1Q9Y5B0 961 aaPredicted RBP15.96■□□□□ 0.14
TNFRSF11A-201ENST00000269485 SMCO2A6NFE2 343 aa15.95■□□□□ 0.14
TNFRSF11A-201ENST00000269485 TXLNAP40222 546 aa15.95■□□□□ 0.14
TNFRSF11A-201ENST00000269485 CDK8P49336 464 aa15.95■□□□□ 0.14
TNFRSF11A-201ENST00000269485 SLIT2O94813 1529 aa15.95■□□□□ 0.14
TNFRSF11A-201ENST00000269485 LRP6O75581 1613 aa15.95■□□□□ 0.14
TNFRSF11A-201ENST00000269485 HOXA13P31271 388 aaPredicted RBP15.95■□□□□ 0.14
TNFRSF11A-201ENST00000269485 TTC31Q49AM3 519 aaPredicted RBP15.95■□□□□ 0.14
TNFRSF11A-201ENST00000269485 TXLNBQ8N3L3 684 aa15.95■□□□□ 0.14
TNFRSF11A-201ENST00000269485 STAG1Q8WVM7 1258 aa15.95■□□□□ 0.14
TNFRSF11A-201ENST00000269485 HOOK1Q9UJC3 728 aaKnown RBP15.95■□□□□ 0.14
TNFRSF11A-201ENST00000269485 AKR1B1P15121 316 aa15.95■□□□□ 0.14
TNFRSF11A-201ENST00000269485 CYP4A11Q02928 519 aa15.95■□□□□ 0.14
TNFRSF11A-201ENST00000269485 RC3H1Q5TC82 1133 aaKnown RBP15.95■□□□□ 0.14
TNFRSF11A-201ENST00000269485 BRAPQ7Z569 592 aa15.95■□□□□ 0.14
TNFRSF11A-201ENST00000269485 DPF2Q92785 391 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms