RNA–Protein interactions for RNA: ENST00000266743.6

SYCP3-201, Transcript of synaptonemal complex protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP3, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-201ENST00000266743 CHD9Q3L8U1 2897 aa12.12□□□□□ -0.47
SYCP3-201ENST00000266743 FLT1P17948 1338 aa12.12□□□□□ -0.47
SYCP3-201ENST00000266743 PDS5AQ29RF7 1337 aaKnown RBP12.12□□□□□ -0.47
SYCP3-201ENST00000266743 ATAD5Q96QE3 1844 aa12.12□□□□□ -0.47
SYCP3-201ENST00000266743 A0A1W2PQ45 241 aaPredicted RBP12.12□□□□□ -0.47
SYCP3-201ENST00000266743 A0A1W2PQY0 241 aa12.12□□□□□ -0.47
SYCP3-201ENST00000266743 FAM86C2PA6NEL3 165 aa12.12□□□□□ -0.47
SYCP3-201ENST00000266743 TAL1P17542 331 aaPredicted RBP12.12□□□□□ -0.47
SYCP3-201ENST00000266743 RAB3GAP1Q15042 981 aa12.12□□□□□ -0.47
SYCP3-201ENST00000266743 TMEM240Q5SV17 173 aa12.12□□□□□ -0.47
SYCP3-201ENST00000266743 OLFML2BQ68BL8 750 aa12.12□□□□□ -0.47
SYCP3-201ENST00000266743 METTL16Q86W50 562 aaKnown RBP12.12□□□□□ -0.47
SYCP3-201ENST00000266743 SPATA5Q8NB90 893 aa12.12□□□□□ -0.47
SYCP3-201ENST00000266743 KHSRPQ92945 711 aaKnown RBP eCLIP12.12□□□□□ -0.47
SYCP3-201ENST00000266743 C12orf42Q96LP6 360 aa12.12□□□□□ -0.47
SYCP3-201ENST00000266743 DHX36Q9H2U1 1008 aaKnown RBP12.12□□□□□ -0.47
SYCP3-201ENST00000266743 XPNPEP3Q9NQH7 507 aa12.12□□□□□ -0.47
SYCP3-201ENST00000266743 SNRKQ9NRH2 765 aa12.12□□□□□ -0.47
SYCP3-201ENST00000266743 SYNGAP1Q96PV0 1343 aa12.11□□□□□ -0.47
SYCP3-201ENST00000266743 ERCC3P19447 782 aa12.11□□□□□ -0.47
SYCP3-201ENST00000266743 DYNLL1P63167 89 aaKnown RBP12.11□□□□□ -0.47
SYCP3-201ENST00000266743 FOXP4Q8IVH2 680 aaPredicted RBP12.11□□□□□ -0.47
SYCP3-201ENST00000266743 SLC44A5Q8NCS7 719 aa12.11□□□□□ -0.47
SYCP3-201ENST00000266743 LRP2BPQ9P2M1 347 aa12.11□□□□□ -0.47
SYCP3-201ENST00000266743 YBX2Q9Y2T7 364 aaKnown RBP12.11□□□□□ -0.47
SYCP3-201ENST00000266743 HCN4Q9Y3Q4 1203 aa12.11□□□□□ -0.47
SYCP3-201ENST00000266743 XIRP2A4UGR9 3374 aa12.11□□□□□ -0.47
SYCP3-201ENST00000266743 SIPA1L1O43166 1804 aa12.11□□□□□ -0.47
SYCP3-201ENST00000266743 CACNA1FO60840 1977 aa12.1□□□□□ -0.47
SYCP3-201ENST00000266743 MAP4K4O95819 1239 aaPredicted RBP12.1□□□□□ -0.47
SYCP3-201ENST00000266743 UBTFL1P0CB47 393 aaPredicted RBP12.1□□□□□ -0.47
SYCP3-201ENST00000266743 CSF2RAP15509 400 aa12.1□□□□□ -0.47
SYCP3-201ENST00000266743 MCAMP43121 646 aa12.1□□□□□ -0.47
SYCP3-201ENST00000266743 MFSD10Q14728 455 aa12.1□□□□□ -0.47
SYCP3-201ENST00000266743 MVPQ14764 893 aaKnown RBP12.1□□□□□ -0.47
SYCP3-201ENST00000266743 ZNF365Q70YC5 407 aa12.1□□□□□ -0.47
SYCP3-201ENST00000266743 PTCD2Q8WV60 388 aaKnown RBP12.1□□□□□ -0.47
SYCP3-201ENST00000266743 SSH1Q8WYL5 1049 aa12.1□□□□□ -0.47
SYCP3-201ENST00000266743 CDCA7LQ96GN5 454 aa12.1□□□□□ -0.47
SYCP3-201ENST00000266743 WDR70Q9NW82 654 aa12.1□□□□□ -0.47
SYCP3-201ENST00000266743 CXXC1Q9P0U4 656 aaPredicted RBP12.1□□□□□ -0.47
SYCP3-201ENST00000266743 NCOR1O75376 2440 aa12.1□□□□□ -0.47
SYCP3-201ENST00000266743 TIMP1P01033 207 aa12.09□□□□□ -0.47
SYCP3-201ENST00000266743 RARBP10826 455 aa12.09□□□□□ -0.47
SYCP3-201ENST00000266743 RABGGTBP53611 331 aa12.09□□□□□ -0.47
SYCP3-201ENST00000266743 PLS1Q14651 629 aa12.09□□□□□ -0.47
SYCP3-201ENST00000266743 SKIV2LQ15477 1246 aaKnown RBP12.09□□□□□ -0.47
SYCP3-201ENST00000266743 GORABQ5T7V8 394 aa12.09□□□□□ -0.47
SYCP3-201ENST00000266743 RASIP1Q5U651 963 aa12.09□□□□□ -0.47
SYCP3-201ENST00000266743 NAA16Q6N069 864 aaPredicted RBP12.09□□□□□ -0.47
SYCP3-201ENST00000266743 LBX2Q6XYB7 198 aa12.09□□□□□ -0.47
SYCP3-201ENST00000266743 NCAPG2Q86XI2 1143 aa12.09□□□□□ -0.47
SYCP3-201ENST00000266743 MAML3Q96JK9 1138 aa12.09□□□□□ -0.47
SYCP3-201ENST00000266743 NOL10Q9BSC4 688 aaKnown RBP12.09□□□□□ -0.47
SYCP3-201ENST00000266743 SPATC1LQ9H0A9 340 aa12.09□□□□□ -0.47
SYCP3-201ENST00000266743 KIAA1683Q9H0B3 1180 aa12.09□□□□□ -0.47
SYCP3-201ENST00000266743 C11orf16Q9NQ32 467 aa12.09□□□□□ -0.47
SYCP3-201ENST00000266743 COPRSQ9NQ92 184 aa12.09□□□□□ -0.47
SYCP3-201ENST00000266743 MYADML2A6NDP7 307 aa12.08□□□□□ -0.48
SYCP3-201ENST00000266743 DCDC2CA8MYV0 355 aa12.08□□□□□ -0.48
SYCP3-201ENST00000266743 RFXAPO00287 272 aa12.08□□□□□ -0.48
SYCP3-201ENST00000266743 PGK2P07205 417 aa12.08□□□□□ -0.48
SYCP3-201ENST00000266743 MYOGP15173 224 aa12.08□□□□□ -0.48
SYCP3-201ENST00000266743 TMEM31Q5JXX7 168 aa12.08□□□□□ -0.48
SYCP3-201ENST00000266743 KIAA1755Q5JYT7 1200 aa12.08□□□□□ -0.48
SYCP3-201ENST00000266743 MFSD5Q6N075 450 aa12.08□□□□□ -0.48
SYCP3-201ENST00000266743 RNF180Q86T96 592 aa12.08□□□□□ -0.48
SYCP3-201ENST00000266743 PPP1R12CQ9BZL4 782 aa12.08□□□□□ -0.48
SYCP3-201ENST00000266743 GINM1Q9NU53 330 aa12.08□□□□□ -0.48
SYCP3-201ENST00000266743 TBX21Q9UL17 535 aa12.08□□□□□ -0.48
SYCP3-201ENST00000266743 TCF20Q9UGU0 1960 aaKnown RBP12.08□□□□□ -0.48
SYCP3-201ENST00000266743 PTPRCP08575 1304 aa12.08□□□□□ -0.48
SYCP3-201ENST00000266743 CHD7Q9P2D1 2997 aa12.07□□□□□ -0.48
SYCP3-201ENST00000266743 A0A1W2PRG0 241 aa12.07□□□□□ -0.48
SYCP3-201ENST00000266743 APBB1O00213 710 aa12.07□□□□□ -0.48
SYCP3-201ENST00000266743 BAG3O95817 575 aa12.07□□□□□ -0.48
SYCP3-201ENST00000266743 HLA-DOAP06340 250 aa12.07□□□□□ -0.48
SYCP3-201ENST00000266743 NUDT7P0C024 238 aa12.07□□□□□ -0.48
SYCP3-201ENST00000266743 GUCY1A2P33402 732 aa12.07□□□□□ -0.48
SYCP3-201ENST00000266743 USP14P54578 494 aa12.07□□□□□ -0.48
SYCP3-201ENST00000266743 KRT40Q6A162 431 aa12.07□□□□□ -0.48
SYCP3-201ENST00000266743 ANKRD33Q7Z3H0 272 aa12.07□□□□□ -0.48
SYCP3-201ENST00000266743 HS3ST6Q96QI5 342 aa12.07□□□□□ -0.48
SYCP3-201ENST00000266743 TANGO6Q9C0B7 1094 aa12.07□□□□□ -0.48
SYCP3-201ENST00000266743 STARD7Q9NQZ5 370 aa12.07□□□□□ -0.48
SYCP3-201ENST00000266743 MSRAQ9UJ68 235 aa12.07□□□□□ -0.48
SYCP3-201ENST00000266743 REV3LO60673 3130 aa12.07□□□□□ -0.48
SYCP3-201ENST00000266743 STRNO43815 780 aa12.06□□□□□ -0.48
SYCP3-201ENST00000266743 ADAMTS4O75173 837 aa12.06□□□□□ -0.48
SYCP3-201ENST00000266743 ARID4AP29374 1257 aaPredicted RBP12.06□□□□□ -0.48
SYCP3-201ENST00000266743 CYP2C18P33260 490 aa12.06□□□□□ -0.48
SYCP3-201ENST00000266743 ACLYP53396 1101 aa12.06□□□□□ -0.48
SYCP3-201ENST00000266743 PPP4CP60510 307 aa12.06□□□□□ -0.48
SYCP3-201ENST00000266743 PPIGQ13427 754 aaKnown RBP eCLIP12.06□□□□□ -0.48
SYCP3-201ENST00000266743 COG2Q14746 738 aa12.06□□□□□ -0.48
SYCP3-201ENST00000266743 SEPT2Q15019 361 aa12.06□□□□□ -0.48
SYCP3-201ENST00000266743 ABCB5Q2M3G0 1257 aa12.06□□□□□ -0.48
SYCP3-201ENST00000266743 CERKLQ49MI3 558 aaPredicted RBP12.06□□□□□ -0.48
SYCP3-201ENST00000266743 TATDN1Q6P1N9 297 aa12.06□□□□□ -0.48
SYCP3-201ENST00000266743 MIGA1Q8NAN2 632 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms