RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 MTFR1LQ9H019 292 aa16.33■□□□□ 0.2
PDLIM2-201ENST00000265810 AKR1B1P15121 316 aa16.33■□□□□ 0.2
PDLIM2-201ENST00000265810 PCDHA4Q9UN74 947 aa16.33■□□□□ 0.2
PDLIM2-201ENST00000265810 PARP4Q9UKK3 1724 aaKnown RBP16.33■□□□□ 0.2
PDLIM2-201ENST00000265810 DDX39AO00148 427 aaKnown RBP16.33■□□□□ 0.2
PDLIM2-201ENST00000265810 PSMD14O00487 310 aa16.33■□□□□ 0.2
PDLIM2-201ENST00000265810 BACH1O14867 736 aa16.33■□□□□ 0.2
PDLIM2-201ENST00000265810 IGSF3O75054 1194 aa16.33■□□□□ 0.2
PDLIM2-201ENST00000265810 TM4SF1P30408 202 aa16.33■□□□□ 0.2
PDLIM2-201ENST00000265810 SBK1Q52WX2 424 aa16.33■□□□□ 0.2
PDLIM2-201ENST00000265810 HHIPL2Q6UWX4 724 aa16.33■□□□□ 0.2
PDLIM2-201ENST00000265810 CACNA2D4Q7Z3S7 1137 aa16.33■□□□□ 0.2
PDLIM2-201ENST00000265810 OSBPL5Q9H0X9 879 aaPredicted RBP16.33■□□□□ 0.2
PDLIM2-201ENST00000265810 GPR75-ASB3A0A0A6YYF3 556 aa16.32■□□□□ 0.2
PDLIM2-201ENST00000265810 IBSPP21815 317 aaPredicted RBP16.32■□□□□ 0.2
PDLIM2-201ENST00000265810 SLC39A14Q15043 492 aa16.32■□□□□ 0.2
PDLIM2-201ENST00000265810 NEDD1Q8NHV4 660 aa16.32■□□□□ 0.2
PDLIM2-201ENST00000265810 NUP88Q99567 741 aaPredicted RBP16.32■□□□□ 0.2
PDLIM2-201ENST00000265810 PAGR1Q9BTK6 254 aa16.32■□□□□ 0.2
PDLIM2-201ENST00000265810 MRPL11Q9Y3B7 192 aaKnown RBP16.32■□□□□ 0.2
PDLIM2-201ENST00000265810 ANTXR2P58335 489 aa16.32■□□□□ 0.2
PDLIM2-201ENST00000265810 ZNF397Q8NF99 534 aaPredicted RBP16.32■□□□□ 0.2
PDLIM2-201ENST00000265810 IGDCC4Q8TDY8 1250 aa16.32■□□□□ 0.2
PDLIM2-201ENST00000265810 SERTAD1Q9UHV2 236 aa16.32■□□□□ 0.2
PDLIM2-201ENST00000265810 ASNSP08243 561 aa16.32■□□□□ 0.2
PDLIM2-201ENST00000265810 MNS1Q8NEH6 495 aa16.32■□□□□ 0.2
PDLIM2-201ENST00000265810 MAPK8IP1Q9UQF2 711 aa16.32■□□□□ 0.2
PDLIM2-201ENST00000265810 HOXA10P31260 410 aaPredicted RBP16.31■□□□□ 0.2
PDLIM2-201ENST00000265810 TECP42680 631 aa16.31■□□□□ 0.2
PDLIM2-201ENST00000265810 ZNF445P59923 1031 aa16.31■□□□□ 0.2
PDLIM2-201ENST00000265810 RSBN1LQ6PCB5 846 aaPredicted RBP16.31■□□□□ 0.2
PDLIM2-201ENST00000265810 GADL1Q6ZQY3 521 aa16.31■□□□□ 0.2
PDLIM2-201ENST00000265810 ADGRA1Q86SQ6 560 aa16.31■□□□□ 0.2
PDLIM2-201ENST00000265810 PGBD1Q96JS3 809 aa16.31■□□□□ 0.2
PDLIM2-201ENST00000265810 CCPG1Q9ULG6 757 aa16.31■□□□□ 0.2
PDLIM2-201ENST00000265810 CMA1P23946 247 aa16.31■□□□□ 0.2
PDLIM2-201ENST00000265810 PRR16Q569H4 304 aa16.31■□□□□ 0.2
PDLIM2-201ENST00000265810 CABP7Q86V35 215 aa16.31■□□□□ 0.2
PDLIM2-201ENST00000265810 FAM114A1Q8IWE2 563 aa16.31■□□□□ 0.2
PDLIM2-201ENST00000265810 GCOM1H8Y6P7 765 aaPredicted RBP16.31■□□□□ 0.2
PDLIM2-201ENST00000265810 POLR2MP0CAP2 368 aa16.31■□□□□ 0.2
PDLIM2-201ENST00000265810 HAUS3Q68CZ6 603 aa16.31■□□□□ 0.2
PDLIM2-201ENST00000265810 STAT2P52630 851 aa16.31■□□□□ 0.2
PDLIM2-201ENST00000265810 SMCR8Q8TEV9 937 aaPredicted RBP16.31■□□□□ 0.2
PDLIM2-201ENST00000265810 RIOK1Q9BRS2 568 aaKnown RBP16.31■□□□□ 0.2
PDLIM2-201ENST00000265810 POLR3EQ9NVU0 708 aa16.31■□□□□ 0.2
PDLIM2-201ENST00000265810 FAM13AO94988 1023 aa16.3■□□□□ 0.2
PDLIM2-201ENST00000265810 EEF2P13639 858 aaKnown RBP16.3■□□□□ 0.2
PDLIM2-201ENST00000265810 NDUFA8P51970 172 aa16.3■□□□□ 0.2
PDLIM2-201ENST00000265810 ENOX2Q16206 610 aaKnown RBP16.3■□□□□ 0.2
PDLIM2-201ENST00000265810 SEPT11Q9NVA2 429 aaKnown RBP16.3■□□□□ 0.2
PDLIM2-201ENST00000265810 SNAP25P60880 206 aa16.3■□□□□ 0.2
PDLIM2-201ENST00000265810 POSTNQ15063 836 aa16.3■□□□□ 0.2
PDLIM2-201ENST00000265810 LINC00301Q8NCQ3 95 aa16.3■□□□□ 0.2
PDLIM2-201ENST00000265810 ZNF341Q9BYN7 854 aa16.3■□□□□ 0.2
PDLIM2-201ENST00000265810 SENP2Q9HC62 589 aa16.3■□□□□ 0.2
PDLIM2-201ENST00000265810 RCOR1Q9UKL0 485 aa16.3■□□□□ 0.2
PDLIM2-201ENST00000265810 RGPD2P0DJD1 1756 aa16.3■□□□□ 0.2
PDLIM2-201ENST00000265810 PDE4DQ08499 809 aa16.29■□□□□ 0.2
PDLIM2-201ENST00000265810 CNOT7Q9UIV1 285 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-201ENST00000265810 OR52Z1P0C646 297 aa16.29■□□□□ 0.2
PDLIM2-201ENST00000265810 PPP4CP60510 307 aa16.29■□□□□ 0.2
PDLIM2-201ENST00000265810 SYDE2Q5VT97 1194 aa16.29■□□□□ 0.2
PDLIM2-201ENST00000265810 MICALL2Q8IY33 904 aa16.29■□□□□ 0.2
PDLIM2-201ENST00000265810 PCDHA12Q9UN75 941 aa16.29■□□□□ 0.2
PDLIM2-201ENST00000265810 ZDHHC9Q9Y397 364 aa16.29■□□□□ 0.2
PDLIM2-201ENST00000265810 PNOCQ13519 176 aa16.29■□□□□ 0.2
PDLIM2-201ENST00000265810 ZNF526Q8TF50 670 aaPredicted RBP16.29■□□□□ 0.2
PDLIM2-201ENST00000265810 BLZF1Q9H2G9 400 aa16.29■□□□□ 0.2
PDLIM2-201ENST00000265810 LUC7LQ9NQ29 371 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-201ENST00000265810 SCAF8Q9UPN6 1271 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-201ENST00000265810 SPAG1Q07617 926 aa16.29■□□□□ 0.2
PDLIM2-201ENST00000265810 ZNF830Q96NB3 372 aaPredicted RBP16.29■□□□□ 0.2
PDLIM2-201ENST00000265810 MYL5Q02045 173 aa16.28■□□□□ 0.2
PDLIM2-201ENST00000265810 CCDC70Q6NSX1 233 aa16.28■□□□□ 0.2
PDLIM2-201ENST00000265810 DYMQ7RTS9 669 aa16.28■□□□□ 0.2
PDLIM2-201ENST00000265810 CLEC10AQ8IUN9 316 aa16.28■□□□□ 0.2
PDLIM2-201ENST00000265810 IVNS1ABPQ9Y6Y0 642 aa16.28■□□□□ 0.2
PDLIM2-201ENST00000265810 CDC37Q16543 378 aaPredicted RBP16.28■□□□□ 0.2
PDLIM2-201ENST00000265810 TBCKQ8TEA7 893 aa16.28■□□□□ 0.2
PDLIM2-201ENST00000265810 RCAN1P53805 252 aa16.28■□□□□ 0.2
PDLIM2-201ENST00000265810 GSDMDP57764 484 aa16.28■□□□□ 0.2
PDLIM2-201ENST00000265810 CCDC186Q7Z3E2 898 aa16.28■□□□□ 0.2
PDLIM2-201ENST00000265810 STAG2Q8N3U4 1231 aa16.28■□□□□ 0.2
PDLIM2-201ENST00000265810 BICD1Q96G01 975 aa16.28■□□□□ 0.2
PDLIM2-201ENST00000265810 DDX25Q9UHL0 483 aaKnown RBP16.28■□□□□ 0.2
PDLIM2-201ENST00000265810 PCDHB6Q9Y5E3 794 aa16.28■□□□□ 0.2
PDLIM2-201ENST00000265810 TCRBV5S4A2TA0A5A2 114 aa16.28■□□□□ 0.2
PDLIM2-201ENST00000265810 IL1R1P14778 569 aa16.28■□□□□ 0.2
PDLIM2-201ENST00000265810 USP14P54578 494 aa16.28■□□□□ 0.2
PDLIM2-201ENST00000265810 RAD51AP2Q09MP3 1159 aa16.28■□□□□ 0.2
PDLIM2-201ENST00000265810 ZFYVE27Q5T4F4 411 aa16.28■□□□□ 0.2
PDLIM2-201ENST00000265810 PHRF1Q9P1Y6 1649 aaKnown RBP16.27■□□□□ 0.2
PDLIM2-201ENST00000265810 TRAPPC10P48553 1259 aa16.27■□□□□ 0.2
PDLIM2-201ENST00000265810 CCDC65Q8IXS2 484 aa16.27■□□□□ 0.2
PDLIM2-201ENST00000265810 CSRNP2Q9H175 543 aa16.27■□□□□ 0.2
PDLIM2-201ENST00000265810 PODXL2Q9NZ53 605 aa16.27■□□□□ 0.2
PDLIM2-201ENST00000265810 PNMA6FA0A0J9YX94 578 aa16.27■□□□□ 0.2
PDLIM2-201ENST00000265810 A0A0U1RQG5 324 aaPredicted RBP16.27■□□□□ 0.2
PDLIM2-201ENST00000265810 F5H6K3 240 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms