RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 EHD2Q9NZN4 543 aa9.84□□□□□ -0.83
VAPB-201ENST00000265619 ATXN2Q99700 1313 aaKnown RBP9.84□□□□□ -0.83
VAPB-201ENST00000265619 RAD21O60216 631 aa9.83□□□□□ -0.84
VAPB-201ENST00000265619 MFAP3LO75121 409 aa9.83□□□□□ -0.84
VAPB-201ENST00000265619 SNUPNO95149 360 aaKnown RBP9.83□□□□□ -0.84
VAPB-201ENST00000265619 IGKV5-2P06315 115 aa9.83□□□□□ -0.84
VAPB-201ENST00000265619 CALRP27797 417 aaKnown RBP9.83□□□□□ -0.84
VAPB-201ENST00000265619 CASP1P29466 404 aa9.83□□□□□ -0.84
VAPB-201ENST00000265619 MYO1EQ12965 1108 aa9.83□□□□□ -0.84
VAPB-201ENST00000265619 PDIA6Q15084 440 aa9.83□□□□□ -0.84
VAPB-201ENST00000265619 ANO1Q5XXA6 986 aa9.83□□□□□ -0.84
VAPB-201ENST00000265619 OLFM4Q6UX06 510 aa9.83□□□□□ -0.84
VAPB-201ENST00000265619 BZW1Q7L1Q6 419 aaKnown RBP9.83□□□□□ -0.84
VAPB-201ENST00000265619 ZNF513Q8N8E2 541 aaPredicted RBP9.83□□□□□ -0.84
VAPB-201ENST00000265619 KCNG4Q8TDN1 519 aa9.83□□□□□ -0.84
VAPB-201ENST00000265619 FAM89AQ96GI7 184 aa9.83□□□□□ -0.84
VAPB-201ENST00000265619 POLR3EQ9NVU0 708 aa9.83□□□□□ -0.84
VAPB-201ENST00000265619 ALS2Q96Q42 1657 aa9.83□□□□□ -0.84
VAPB-201ENST00000265619 FAM163BP0C2L3 166 aa9.83□□□□□ -0.84
VAPB-201ENST00000265619 EPHA10Q5JZY3 1008 aa9.83□□□□□ -0.84
VAPB-201ENST00000265619 CCDC24Q8N4L8 307 aa9.83□□□□□ -0.84
VAPB-201ENST00000265619 ZNF594Q96JF6 807 aaPredicted RBP9.83□□□□□ -0.84
VAPB-201ENST00000265619 ZIM3Q96PE6 472 aa9.83□□□□□ -0.84
VAPB-201ENST00000265619 EPN3Q9H201 632 aa9.83□□□□□ -0.84
VAPB-201ENST00000265619 EP400Q96L91 3159 aa9.83□□□□□ -0.84
VAPB-201ENST00000265619 A0A1B0GTH6 734 aa9.83□□□□□ -0.84
VAPB-201ENST00000265619 USP4Q13107 963 aa9.83□□□□□ -0.84
VAPB-201ENST00000265619 PTGISQ16647 500 aa9.83□□□□□ -0.84
VAPB-201ENST00000265619 NLRP14Q86W24 1093 aa9.83□□□□□ -0.84
VAPB-201ENST00000265619 ZNF570Q96NI8 536 aa9.83□□□□□ -0.84
VAPB-201ENST00000265619 LRRC1Q9BTT6 524 aa9.83□□□□□ -0.84
VAPB-201ENST00000265619 RIPOR2Q9Y4F9 1068 aa9.83□□□□□ -0.84
VAPB-201ENST00000265619 ZNF609O15014 1411 aa9.83□□□□□ -0.84
VAPB-201ENST00000265619 TMCO5BA8MYB1 307 aa9.82□□□□□ -0.84
VAPB-201ENST00000265619 UBE2Q2LH0YL09 131 aa9.82□□□□□ -0.84
VAPB-201ENST00000265619 LGR5O75473 907 aa9.82□□□□□ -0.84
VAPB-201ENST00000265619 CPDO75976 1380 aa9.82□□□□□ -0.84
VAPB-201ENST00000265619 MDM2Q00987 491 aaPredicted RBP9.82□□□□□ -0.84
VAPB-201ENST00000265619 NNTQ13423 1086 aa9.82□□□□□ -0.84
VAPB-201ENST00000265619 BYSLQ13895 437 aaKnown RBP9.82□□□□□ -0.84
VAPB-201ENST00000265619 LINS1Q8NG48 757 aa9.82□□□□□ -0.84
VAPB-201ENST00000265619 OR8K1Q8NGG5 319 aa9.82□□□□□ -0.84
VAPB-201ENST00000265619 AIDAQ96BJ3 306 aa9.82□□□□□ -0.84
VAPB-201ENST00000265619 LLPHQ9BRT6 129 aaKnown RBP9.82□□□□□ -0.84
VAPB-201ENST00000265619 DUSP10Q9Y6W6 482 aa9.82□□□□□ -0.84
VAPB-201ENST00000265619 RCCD1A6NED2 376 aa9.82□□□□□ -0.84
VAPB-201ENST00000265619 EZRP15311 586 aaKnown RBP9.82□□□□□ -0.84
VAPB-201ENST00000265619 PBX1P40424 430 aa9.82□□□□□ -0.84
VAPB-201ENST00000265619 LMBR1LQ6UX01 489 aa9.82□□□□□ -0.84
VAPB-201ENST00000265619 PTF1AQ7RTS3 328 aa9.82□□□□□ -0.84
VAPB-201ENST00000265619 NBPF5PQ86XG9 351 aaPredicted RBP9.82□□□□□ -0.84
VAPB-201ENST00000265619 SMYD4Q8IYR2 804 aaPredicted RBP9.82□□□□□ -0.84
VAPB-201ENST00000265619 MAB21L3Q8N8X9 362 aa9.82□□□□□ -0.84
VAPB-201ENST00000265619 MYH13Q9UKX3 1938 aa9.81□□□□□ -0.84
VAPB-201ENST00000265619 NEURL1BA8MQ27 555 aa9.81□□□□□ -0.84
VAPB-201ENST00000265619 YEATS4O95619 227 aa9.81□□□□□ -0.84
VAPB-201ENST00000265619 CD44P16070 742 aaKnown RBP9.81□□□□□ -0.84
VAPB-201ENST00000265619 ATL3Q6DD88 541 aa9.81□□□□□ -0.84
VAPB-201ENST00000265619 KIF6Q6ZMV9 814 aa9.81□□□□□ -0.84
VAPB-201ENST00000265619 MAEAQ7L5Y9 396 aa9.81□□□□□ -0.84
VAPB-201ENST00000265619 PPANQ9NQ55 473 aaKnown RBP9.81□□□□□ -0.84
VAPB-201ENST00000265619 BABAM1Q9NWV8 329 aa9.81□□□□□ -0.84
VAPB-201ENST00000265619 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.81□□□□□ -0.842e-8■□□□□ 10.4
VAPB-201ENST00000265619 HMG20BQ9P0W2 317 aa9.81□□□□□ -0.84
VAPB-201ENST00000265619 ZBTB1Q9Y2K1 713 aa9.81□□□□□ -0.84
VAPB-201ENST00000265619 ZNF233A6NK53 670 aa9.81□□□□□ -0.84
VAPB-201ENST00000265619 MAFGO15525 162 aa9.81□□□□□ -0.84
VAPB-201ENST00000265619 FAM153BP0C7A2 387 aa9.81□□□□□ -0.84
VAPB-201ENST00000265619 PECAM1P16284 738 aaPredicted RBP9.81□□□□□ -0.84
VAPB-201ENST00000265619 MATR3P43243 847 aaKnown RBP eCLIP9.81□□□□□ -0.846e-7■■■■□ 22.1
VAPB-201ENST00000265619 CDR1P51861 262 aa9.81□□□□□ -0.84
VAPB-201ENST00000265619 FAM153CQ494X1 144 aa9.81□□□□□ -0.84
VAPB-201ENST00000265619 CCDC181Q5TID7 509 aa9.81□□□□□ -0.84
VAPB-201ENST00000265619 KLHL10Q6JEL2 608 aa9.81□□□□□ -0.84
VAPB-201ENST00000265619 MIS18BP1Q6P0N0 1132 aa9.81□□□□□ -0.84
VAPB-201ENST00000265619 YTHDF3Q7Z739 585 aaKnown RBP9.81□□□□□ -0.84
VAPB-201ENST00000265619 FAM153AQ9UHL3 310 aa9.81□□□□□ -0.84
VAPB-201ENST00000265619 ROBO1Q9Y6N7 1651 aa9.81□□□□□ -0.84
VAPB-201ENST00000265619 PHRF1Q9P1Y6 1649 aaKnown RBP9.81□□□□□ -0.84
VAPB-201ENST00000265619 N4BP2Q86UW6 1770 aaPredicted RBP9.81□□□□□ -0.84
VAPB-201ENST00000265619 ZSCAN5CA6NGD5 496 aaPredicted RBP9.81□□□□□ -0.84
VAPB-201ENST00000265619 E7EVH7 732 aa9.81□□□□□ -0.84
VAPB-201ENST00000265619 CCT6AP40227 531 aaKnown RBP9.81□□□□□ -0.84
VAPB-201ENST00000265619 RWDD2BP57060 319 aa9.81□□□□□ -0.84
VAPB-201ENST00000265619 GCKRQ14397 625 aa9.81□□□□□ -0.84
VAPB-201ENST00000265619 ANKRD20A8PQ5CZ79 823 aa9.81□□□□□ -0.84
VAPB-201ENST00000265619 USP21Q9UK80 565 aa9.81□□□□□ -0.84
VAPB-201ENST00000265619 FAM184BQ9ULE4 1060 aa9.81□□□□□ -0.84
VAPB-201ENST00000265619 GOLGA8KD6RF30 607 aa9.8□□□□□ -0.84
VAPB-201ENST00000265619 STARD3NLO95772 234 aa9.8□□□□□ -0.84
VAPB-201ENST00000265619 HOXB7P09629 217 aa9.8□□□□□ -0.84
VAPB-201ENST00000265619 LINGO3P0C6S8 592 aa9.8□□□□□ -0.84
VAPB-201ENST00000265619 SSR1P43307 286 aaKnown RBP9.8□□□□□ -0.84
VAPB-201ENST00000265619 SAAL1Q96ER3 474 aa9.8□□□□□ -0.84
VAPB-201ENST00000265619 HOOK1Q9UJC3 728 aaKnown RBP9.8□□□□□ -0.84
VAPB-201ENST00000265619 ZMYM6O95789 1325 aa9.8□□□□□ -0.84
VAPB-201ENST00000265619 SMNDC1O75940 238 aaKnown RBP eCLIP9.8□□□□□ -0.84
VAPB-201ENST00000265619 ATP6V1G2O95670 118 aa9.8□□□□□ -0.84
VAPB-201ENST00000265619 SCTRP47872 440 aa9.8□□□□□ -0.84
VAPB-201ENST00000265619 EXOSC10Q01780 885 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms