RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 USP17L13C9JLJ4 530 aa16.7■□□□□ 0.26
SSBP1-201ENST00000265304 USP17L11C9JVI0 530 aa16.7■□□□□ 0.26
SSBP1-201ENST00000265304 USP17L18D6R9N7 530 aa16.7■□□□□ 0.26
SSBP1-201ENST00000265304 USP17L22D6RA61 530 aa16.7■□□□□ 0.26
SSBP1-201ENST00000265304 USP17L17D6RBQ6 530 aa16.7■□□□□ 0.26
SSBP1-201ENST00000265304 USP17L19D6RCP7 530 aa16.7■□□□□ 0.26
SSBP1-201ENST00000265304 USP17L20D6RJB6 530 aa16.7■□□□□ 0.26
SSBP1-201ENST00000265304 IGF2BP3O00425 579 aaKnown RBP eCLIP16.7■□□□□ 0.26
SSBP1-201ENST00000265304 NEK4P51957 841 aa16.7■□□□□ 0.26
SSBP1-201ENST00000265304 ATP2B2Q01814 1243 aa16.7■□□□□ 0.26
SSBP1-201ENST00000265304 ZNF543Q08ER8 600 aa16.7■□□□□ 0.26
SSBP1-201ENST00000265304 USP17L24Q0WX57 530 aa16.7■□□□□ 0.26
SSBP1-201ENST00000265304 ANKRD1Q15327 319 aa16.7■□□□□ 0.26
SSBP1-201ENST00000265304 TREML2Q5T2D2 321 aa16.7■□□□□ 0.26
SSBP1-201ENST00000265304 GPATCH4Q5T3I0 446 aaKnown RBP16.7■□□□□ 0.26
SSBP1-201ENST00000265304 IFNL1Q8IU54 200 aa16.7■□□□□ 0.26
SSBP1-201ENST00000265304 ZNF654Q8IZM8 581 aa16.7■□□□□ 0.26
SSBP1-201ENST00000265304 LRRC2Q9BYS8 371 aa16.7■□□□□ 0.26
SSBP1-201ENST00000265304 SMCHD1A6NHR9 2005 aa16.7■□□□□ 0.26
SSBP1-201ENST00000265304 MYH6P13533 1939 aa16.7■□□□□ 0.26
SSBP1-201ENST00000265304 A0A0G2JMZ2 1700 aa16.7■□□□□ 0.26
SSBP1-201ENST00000265304 AOC2O75106 756 aa16.69■□□□□ 0.26
SSBP1-201ENST00000265304 ALDH1A1P00352 501 aa16.69■□□□□ 0.26
SSBP1-201ENST00000265304 CALM1P0DP23 149 aa16.69■□□□□ 0.26
SSBP1-201ENST00000265304 CALM2P0DP24 149 aa16.69■□□□□ 0.26
SSBP1-201ENST00000265304 CALM3P0DP25 149 aa16.69■□□□□ 0.26
SSBP1-201ENST00000265304 BMP3P12645 472 aa16.69■□□□□ 0.26
SSBP1-201ENST00000265304 PABPC4Q13310 644 aaKnown RBP eCLIP16.69■□□□□ 0.262e-25■■■□□ 18
SSBP1-201ENST00000265304 DGKZQ13574 1117 aa16.69■□□□□ 0.26
SSBP1-201ENST00000265304 GRM4Q14833 912 aa16.69■□□□□ 0.26
SSBP1-201ENST00000265304 CATIPQ7Z7H3 387 aa16.69■□□□□ 0.26
SSBP1-201ENST00000265304 FAM43AQ8N2R8 423 aa16.69■□□□□ 0.26
SSBP1-201ENST00000265304 BRF1Q92994 677 aa16.69■□□□□ 0.26
SSBP1-201ENST00000265304 HPS5Q9UPZ3 1129 aa16.69■□□□□ 0.26
SSBP1-201ENST00000265304 COL11A1P12107 1806 aaPredicted RBP16.68■□□□□ 0.26
SSBP1-201ENST00000265304 SLC1A4P43007 532 aa16.68■□□□□ 0.26
SSBP1-201ENST00000265304 COG2Q14746 738 aa16.68■□□□□ 0.26
SSBP1-201ENST00000265304 ASPRV1Q53RT3 343 aa16.68■□□□□ 0.26
SSBP1-201ENST00000265304 JMYQ8N9B5 988 aa16.68■□□□□ 0.26
SSBP1-201ENST00000265304 FAM217BQ9NTX9 383 aaPredicted RBP16.68■□□□□ 0.26
SSBP1-201ENST00000265304 HOXC10Q9NYD6 342 aa16.68■□□□□ 0.26
SSBP1-201ENST00000265304 MAD2L2Q9UI95 211 aa16.68■□□□□ 0.26
SSBP1-201ENST00000265304 FEM1BQ9UK73 627 aa16.68■□□□□ 0.26
SSBP1-201ENST00000265304 SLC12A7Q9Y666 1083 aa16.68■□□□□ 0.26
SSBP1-201ENST00000265304 ADGRA2Q96PE1 1338 aa16.68■□□□□ 0.26
SSBP1-201ENST00000265304 CCDC69A6NI79 296 aa16.67■□□□□ 0.26
SSBP1-201ENST00000265304 FDX1P10109 184 aa16.67■□□□□ 0.26
SSBP1-201ENST00000265304 PDIA3P30101 505 aaKnown RBP16.67■□□□□ 0.26
SSBP1-201ENST00000265304 AK2P54819 239 aa16.67■□□□□ 0.26
SSBP1-201ENST00000265304 MKRN3Q13064 507 aaKnown RBP16.67■□□□□ 0.26
SSBP1-201ENST00000265304 OTUD7BQ6GQQ9 843 aa16.67■□□□□ 0.26
SSBP1-201ENST00000265304 POTEEQ6S8J3 1075 aa16.67■□□□□ 0.26
SSBP1-201ENST00000265304 GADL1Q6ZQY3 521 aa16.67■□□□□ 0.26
SSBP1-201ENST00000265304 SPICE1Q8N0Z3 855 aa16.67■□□□□ 0.26
SSBP1-201ENST00000265304 FANCBQ8NB91 859 aa16.67■□□□□ 0.26
SSBP1-201ENST00000265304 ASCC2Q9H1I8 757 aaPredicted RBP16.67■□□□□ 0.26
SSBP1-201ENST00000265304 RPAP3Q9H6T3 665 aaPredicted RBP16.67■□□□□ 0.26
SSBP1-201ENST00000265304 DOCK3Q8IZD9 2030 aa16.67■□□□□ 0.26
SSBP1-201ENST00000265304 PDHXO00330 501 aa16.66■□□□□ 0.26
SSBP1-201ENST00000265304 DSG3P32926 999 aa16.66■□□□□ 0.26
SSBP1-201ENST00000265304 APOBRQ0VD83 1088 aa16.66■□□□□ 0.26
SSBP1-201ENST00000265304 ZYXQ15942 572 aaKnown RBP16.66■□□□□ 0.26
SSBP1-201ENST00000265304 NOM1Q5C9Z4 860 aaKnown RBP16.66■□□□□ 0.26
SSBP1-201ENST00000265304 FAM83BQ5T0W9 1011 aa16.66■□□□□ 0.26
SSBP1-201ENST00000265304 FAM160B2Q86V87 743 aa16.66■□□□□ 0.26
SSBP1-201ENST00000265304 PRPF38AQ8NAV1 312 aaKnown RBP16.66■□□□□ 0.26
SSBP1-201ENST00000265304 CHURC1Q8WUH1 139 aa16.66■□□□□ 0.26
SSBP1-201ENST00000265304 MTMR8Q96EF0 704 aa16.66■□□□□ 0.26
SSBP1-201ENST00000265304 LZTS2Q9BRK4 669 aa16.66■□□□□ 0.26
SSBP1-201ENST00000265304 RIOX1Q9H6W3 641 aa16.66■□□□□ 0.26
SSBP1-201ENST00000265304 PPP1R9AQ9ULJ8 1098 aa16.66■□□□□ 0.26
SSBP1-201ENST00000265304 KLF18A0A0U1RQI7 1052 aa16.65■□□□□ 0.26
SSBP1-201ENST00000265304 ATP2A1O14983 1001 aa16.65■□□□□ 0.26
SSBP1-201ENST00000265304 ZBTB43O43298 467 aa16.65■□□□□ 0.26
SSBP1-201ENST00000265304 CA12O43570 354 aa16.65■□□□□ 0.26
SSBP1-201ENST00000265304 PARP1P09874 1014 aaKnown RBP16.65■□□□□ 0.26
SSBP1-201ENST00000265304 KIF5BP33176 963 aa16.65■□□□□ 0.26
SSBP1-201ENST00000265304 MCM2P49736 904 aa16.65■□□□□ 0.26
SSBP1-201ENST00000265304 GNAQP50148 359 aa16.65■□□□□ 0.26
SSBP1-201ENST00000265304 FUT2Q10981 343 aa16.65■□□□□ 0.26
SSBP1-201ENST00000265304 PAXIP1Q6ZW49 1069 aaPredicted RBP16.65■□□□□ 0.26
SSBP1-201ENST00000265304 GTF3C2Q8WUA4 911 aaPredicted RBP16.65■□□□□ 0.26
SSBP1-201ENST00000265304 NUP88Q99567 741 aaPredicted RBP16.65■□□□□ 0.26
SSBP1-201ENST00000265304 P2RX7Q99572 595 aaKnown RBP16.65■□□□□ 0.26
SSBP1-201ENST00000265304 SAGE1Q9NXZ1 904 aa16.65■□□□□ 0.26
SSBP1-201ENST00000265304 PNMA3Q9UL41 463 aa16.65■□□□□ 0.26
SSBP1-201ENST00000265304 TPCN1Q9ULQ1 816 aa16.65■□□□□ 0.26
SSBP1-201ENST00000265304 PFKFB2O60825 505 aa16.64■□□□□ 0.25
SSBP1-201ENST00000265304 OSBPP22059 807 aa16.64■□□□□ 0.25
SSBP1-201ENST00000265304 GCLCP48506 637 aaPredicted RBP16.64■□□□□ 0.25
SSBP1-201ENST00000265304 STAT2P52630 851 aa16.64■□□□□ 0.25
SSBP1-201ENST00000265304 FGD1P98174 961 aa16.64■□□□□ 0.25
SSBP1-201ENST00000265304 MAP2K1Q02750 393 aaPredicted RBP16.64■□□□□ 0.25
SSBP1-201ENST00000265304 NTRK3Q16288 839 aa16.64■□□□□ 0.25
SSBP1-201ENST00000265304 SLC35G1Q2M3R5 365 aa16.64■□□□□ 0.25
SSBP1-201ENST00000265304 SYNE3Q6ZMZ3 975 aa16.64■□□□□ 0.25
SSBP1-201ENST00000265304 NFXL1Q6ZNB6 911 aa16.64■□□□□ 0.25
SSBP1-201ENST00000265304 RASGRP2Q7LDG7 609 aa16.64■□□□□ 0.25
SSBP1-201ENST00000265304 STAG2Q8N3U4 1231 aa16.64■□□□□ 0.25
SSBP1-201ENST00000265304 MB21D1Q8N884 522 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms