RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 ERCC5P28715 1186 aaPredicted RBP18.63■□□□□ 0.57
PHRF1-201ENST00000264555 TRIM28Q13263 835 aaKnown RBP18.63■□□□□ 0.57
PHRF1-201ENST00000264555 C11orf57Q6ZUT1 292 aaPredicted RBP18.63■□□□□ 0.57
PHRF1-201ENST00000264555 OR8K1Q8NGG5 319 aa18.63■□□□□ 0.57
PHRF1-201ENST00000264555 PPIP5K2O43314 1243 aa18.63■□□□□ 0.57
PHRF1-201ENST00000264555 GNA14O95837 355 aa18.63■□□□□ 0.57
PHRF1-201ENST00000264555 CYP2E1P05181 493 aaPredicted RBP18.63■□□□□ 0.57
PHRF1-201ENST00000264555 DPCR1Q3MIW9 517 aa18.63■□□□□ 0.57
PHRF1-201ENST00000264555 TBC1D7Q9P0N9 293 aa18.63■□□□□ 0.57
PHRF1-201ENST00000264555 PRPF3O43395 683 aaKnown RBP18.62■□□□□ 0.57
PHRF1-201ENST00000264555 CYP19A1P11511 503 aaPredicted RBP18.62■□□□□ 0.57
PHRF1-201ENST00000264555 ACTN2P35609 894 aa18.62■□□□□ 0.57
PHRF1-201ENST00000264555 MAGEF1Q9HAY2 307 aa18.62■□□□□ 0.57
PHRF1-201ENST00000264555 TRPC5Q9UL62 973 aaPredicted RBP18.62■□□□□ 0.57
PHRF1-201ENST00000264555 WDR19Q8NEZ3 1342 aa18.62■□□□□ 0.57
PHRF1-201ENST00000264555 TMEM110-MUSTN1A8MSY1 372 aa18.62■□□□□ 0.57
PHRF1-201ENST00000264555 NBPF26B4DH59 902 aa18.62■□□□□ 0.57
PHRF1-201ENST00000264555 MAGEA1P43355 309 aa18.62■□□□□ 0.57
PHRF1-201ENST00000264555 NBPF10Q6P3W6 841 aaKnown RBP18.62■□□□□ 0.57
PHRF1-201ENST00000264555 NBPF15Q8N660 670 aa18.62■□□□□ 0.57
PHRF1-201ENST00000264555 CHURC1Q8WUH1 139 aa18.62■□□□□ 0.57
PHRF1-201ENST00000264555 PCDHA12Q9UN75 941 aa18.62■□□□□ 0.57
PHRF1-201ENST00000264555 PREX1Q8TCU6 1659 aa18.62■□□□□ 0.57
PHRF1-201ENST00000264555 DKC1O60832 514 aaKnown RBP eCLIP18.62■□□□□ 0.57
PHRF1-201ENST00000264555 SCNN1DP51172 638 aa18.62■□□□□ 0.57
PHRF1-201ENST00000264555 NELFCDQ8IXH7 590 aa18.62■□□□□ 0.57
PHRF1-201ENST00000264555 IVLP07476 585 aa18.62■□□□□ 0.57
PHRF1-201ENST00000264555 NT5C2P49902 561 aa18.62■□□□□ 0.57
PHRF1-201ENST00000264555 DOK7Q18PE1 504 aa18.62■□□□□ 0.57
PHRF1-201ENST00000264555 TSGA10IPQ3SY00 556 aa18.62■□□□□ 0.57
PHRF1-201ENST00000264555 CERKLQ49MI3 558 aaPredicted RBP18.62■□□□□ 0.57
PHRF1-201ENST00000264555 IFT81Q8WYA0 676 aa18.62■□□□□ 0.57
PHRF1-201ENST00000264555 SERPINB2P05120 415 aa18.61■□□□□ 0.57
PHRF1-201ENST00000264555 DNM2P50570 870 aa18.61■□□□□ 0.57
PHRF1-201ENST00000264555 SP4Q02446 784 aa18.61■□□□□ 0.57
PHRF1-201ENST00000264555 EXOC7Q9UPT5 735 aa18.61■□□□□ 0.57
PHRF1-201ENST00000264555 SOS2Q07890 1332 aaPredicted RBP18.61■□□□□ 0.57
PHRF1-201ENST00000264555 ABCC12Q96J65 1359 aa18.61■□□□□ 0.57
PHRF1-201ENST00000264555 SLFNL1Q499Z3 407 aa18.61■□□□□ 0.57
PHRF1-201ENST00000264555 MYCT1Q8N699 235 aa18.61■□□□□ 0.57
PHRF1-201ENST00000264555 GPHNQ9NQX3 736 aaPredicted RBP18.61■□□□□ 0.57
PHRF1-201ENST00000264555 TNFAIP3P21580 790 aa18.61■□□□□ 0.57
PHRF1-201ENST00000264555 HOOK2Q96ED9 719 aa18.61■□□□□ 0.57
PHRF1-201ENST00000264555 MRPL44Q9H9J2 332 aaKnown RBP18.61■□□□□ 0.57
PHRF1-201ENST00000264555 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.61■□□□□ 0.57
PHRF1-201ENST00000264555 DIP2AQ14689 1571 aa18.6■□□□□ 0.57
PHRF1-201ENST00000264555 MYOCDQ8IZQ8 938 aa18.6■□□□□ 0.57
PHRF1-201ENST00000264555 RGS22Q8NE09 1264 aa18.6■□□□□ 0.57
PHRF1-201ENST00000264555 CUEDC2Q9H467 287 aa18.6■□□□□ 0.57
PHRF1-201ENST00000264555 VPS18Q9P253 973 aa18.6■□□□□ 0.57
PHRF1-201ENST00000264555 SWAP70Q9UH65 585 aa18.6■□□□□ 0.57
PHRF1-201ENST00000264555 RAD51AP2Q09MP3 1159 aa18.6■□□□□ 0.57
PHRF1-201ENST00000264555 SLFN12Q8IYM2 578 aa18.6■□□□□ 0.57
PHRF1-201ENST00000264555 CCDC17Q96LX7 622 aa18.6■□□□□ 0.57
PHRF1-201ENST00000264555 BRIP1Q9BX63 1249 aa18.6■□□□□ 0.57
PHRF1-201ENST00000264555 PYCARDQ9ULZ3 195 aa18.6■□□□□ 0.57
PHRF1-201ENST00000264555 GJA3Q9Y6H8 435 aa18.6■□□□□ 0.57
PHRF1-201ENST00000264555 PPEF1O14829 653 aaPredicted RBP18.6■□□□□ 0.57
PHRF1-201ENST00000264555 KCNQ4P56696 695 aa18.6■□□□□ 0.57
PHRF1-201ENST00000264555 MECOMQ03112 1051 aa18.6■□□□□ 0.57
PHRF1-201ENST00000264555 STAG1Q8WVM7 1258 aa18.6■□□□□ 0.57
PHRF1-201ENST00000264555 PSDA5PKW4 1024 aaPredicted RBP18.6■□□□□ 0.57
PHRF1-201ENST00000264555 CCDC169A6NNP5 214 aa18.6■□□□□ 0.57
PHRF1-201ENST00000264555 NR5A1Q13285 461 aa18.6■□□□□ 0.57
PHRF1-201ENST00000264555 KIAA0825Q8IV33 1275 aa18.6■□□□□ 0.57
PHRF1-201ENST00000264555 TMOD4Q9NZQ9 345 aa18.6■□□□□ 0.57
PHRF1-201ENST00000264555 PPP2R2CQ9Y2T4 447 aa18.6■□□□□ 0.57
PHRF1-201ENST00000264555 ZDHHC9Q9Y397 364 aa18.6■□□□□ 0.57
PHRF1-201ENST00000264555 ZBED4O75132 1171 aa18.6■□□□□ 0.57
PHRF1-201ENST00000264555 GCNT3O95395 438 aa18.6■□□□□ 0.57
PHRF1-201ENST00000264555 U2AF2P26368 475 aaKnown RBP eCLIP18.6■□□□□ 0.57
PHRF1-201ENST00000264555 ASPRV1Q53RT3 343 aa18.6■□□□□ 0.57
PHRF1-201ENST00000264555 NIM1KQ8IY84 436 aa18.6■□□□□ 0.57
PHRF1-201ENST00000264555 C2CD5Q86YS7 1000 aa18.59■□□□□ 0.57
PHRF1-201ENST00000264555 UIMC1Q96RL1 719 aa18.59■□□□□ 0.57
PHRF1-201ENST00000264555 FAM207AQ9NSI2 230 aaPredicted RBP18.59■□□□□ 0.57
PHRF1-201ENST00000264555 DDX25Q9UHL0 483 aaKnown RBP18.59■□□□□ 0.57
PHRF1-201ENST00000264555 NRBP1Q9UHY1 535 aa18.59■□□□□ 0.57
PHRF1-201ENST00000264555 SETD1BQ9UPS6 1966 aaKnown RBP18.59■□□□□ 0.57
PHRF1-201ENST00000264555 CAPN2P17655 700 aa18.59■□□□□ 0.57
PHRF1-201ENST00000264555 SFMBT2Q5VUG0 894 aa18.59■□□□□ 0.57
PHRF1-201ENST00000264555 KIFAP3Q92845 792 aa18.59■□□□□ 0.57
PHRF1-201ENST00000264555 ZHX1Q9UKY1 873 aaPredicted RBP18.59■□□□□ 0.57
PHRF1-201ENST00000264555 SLFN14P0C7P3 912 aa18.59■□□□□ 0.57
PHRF1-201ENST00000264555 ETF1P62495 437 aaKnown RBP18.59■□□□□ 0.57
PHRF1-201ENST00000264555 SYNE4Q8N205 404 aa18.59■□□□□ 0.57
PHRF1-201ENST00000264555 DEPDC5O75140 1603 aa18.59■□□□□ 0.57
PHRF1-201ENST00000264555 EEF2P13639 858 aaKnown RBP18.59■□□□□ 0.57
PHRF1-201ENST00000264555 GPATCH4Q5T3I0 446 aaKnown RBP18.59■□□□□ 0.57
PHRF1-201ENST00000264555 TMED8Q6PL24 325 aaPredicted RBP18.59■□□□□ 0.57
PHRF1-201ENST00000264555 GPBP1Q86WP2 473 aa18.59■□□□□ 0.57
PHRF1-201ENST00000264555 AK8Q96MA6 479 aa18.59■□□□□ 0.57
PHRF1-201ENST00000264555 NAP1L3Q99457 506 aaPredicted RBP18.59■□□□□ 0.57
PHRF1-201ENST00000264555 SRPRBQ9Y5M8 271 aaKnown RBP18.59■□□□□ 0.57
PHRF1-201ENST00000264555 ICA1Q05084 483 aa18.58■□□□□ 0.57
PHRF1-201ENST00000264555 FNBP1Q96RU3 617 aa18.58■□□□□ 0.57
PHRF1-201ENST00000264555 CCDC77Q9BR77 488 aa18.58■□□□□ 0.57
PHRF1-201ENST00000264555 MTUS1Q9ULD2 1270 aa18.58■□□□□ 0.57
PHRF1-201ENST00000264555 STX10O60499 249 aa18.58■□□□□ 0.57
PHRF1-201ENST00000264555 KLHL30Q0D2K2 578 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms