RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 IGDCC4Q8TDY8 1250 aa21.51■■□□□ 1.03
SDF4-201ENST00000263741 TTC14Q96N46 770 aa21.51■■□□□ 1.03
SDF4-201ENST00000263741 P2RX7Q99572 595 aaKnown RBP21.51■■□□□ 1.03
SDF4-201ENST00000263741 UPF3BQ9BZI7 483 aaKnown RBP21.51■■□□□ 1.03
SDF4-201ENST00000263741 ADGRA2Q96PE1 1338 aa21.51■■□□□ 1.03
SDF4-201ENST00000263741 ERICH2A1L162 156 aa21.51■■□□□ 1.03
SDF4-201ENST00000263741 PABPC4Q13310 644 aaKnown RBP eCLIP21.51■■□□□ 1.037e-7■■■■□ 19.7
SDF4-201ENST00000263741 CCDC96Q2M329 555 aa21.51■■□□□ 1.03
SDF4-201ENST00000263741 CATSPERGQ6ZRH7 1159 aa21.51■■□□□ 1.03
SDF4-201ENST00000263741 LY9Q9HBG7 655 aa21.51■■□□□ 1.03
SDF4-201ENST00000263741 ZFYVE28Q9HCC9 887 aa21.51■■□□□ 1.03
SDF4-201ENST00000263741 ZCCHC17Q9NP64 241 aaKnown RBP21.51■■□□□ 1.03
SDF4-201ENST00000263741 SAGE1Q9NXZ1 904 aa21.51■■□□□ 1.03
SDF4-201ENST00000263741 SLC45A1Q9Y2W3 748 aa21.51■■□□□ 1.03
SDF4-201ENST00000263741 BAZ2BQ9UIF8 2168 aaKnown RBP21.5■■□□□ 1.03
SDF4-201ENST00000263741 SH2B2O14492 632 aaPredicted RBP21.5■■□□□ 1.03
SDF4-201ENST00000263741 FLOT1O75955 427 aa21.5■■□□□ 1.03
SDF4-201ENST00000263741 OSBPP22059 807 aa21.5■■□□□ 1.03
SDF4-201ENST00000263741 SART3Q15020 963 aaKnown RBP21.5■■□□□ 1.03
SDF4-201ENST00000263741 BLOC1S2Q6QNY1 142 aa21.5■■□□□ 1.03
SDF4-201ENST00000263741 POTEEQ6S8J3 1075 aa21.5■■□□□ 1.03
SDF4-201ENST00000263741 DHX32Q7L7V1 743 aaKnown RBP21.5■■□□□ 1.03
SDF4-201ENST00000263741 PNMA3Q9UL41 463 aa21.5■■□□□ 1.03
SDF4-201ENST00000263741 PDHBP11177 359 aa21.49■■□□□ 1.03
SDF4-201ENST00000263741 SLC1A4P43007 532 aa21.49■■□□□ 1.03
SDF4-201ENST00000263741 HERVK_113P62684 666 aa21.49■■□□□ 1.03
SDF4-201ENST00000263741 CCDC178Q5BJE1 867 aa21.49■■□□□ 1.03
SDF4-201ENST00000263741 RAB11FIP4Q86YS3 637 aa21.49■■□□□ 1.03
SDF4-201ENST00000263741 ANKS1AQ92625 1134 aa21.49■■□□□ 1.03
SDF4-201ENST00000263741 MYL10Q9BUA6 226 aa21.49■■□□□ 1.03
SDF4-201ENST00000263741 SYNPO2Q9UMS6 1093 aa21.49■■□□□ 1.03
SDF4-201ENST00000263741 BMP3P12645 472 aa21.49■■□□□ 1.03
SDF4-201ENST00000263741 EXOSC10Q01780 885 aaKnown RBP21.49■■□□□ 1.03
SDF4-201ENST00000263741 SMCHD1A6NHR9 2005 aa21.49■■□□□ 1.03
SDF4-201ENST00000263741 DOCK3Q8IZD9 2030 aa21.48■■□□□ 1.03
SDF4-201ENST00000263741 SPDYE16A6NNV3 312 aaPredicted RBP21.48■■□□□ 1.03
SDF4-201ENST00000263741 TLR2O60603 784 aa21.48■■□□□ 1.03
SDF4-201ENST00000263741 GOLGA8HP0CJ92 632 aa21.48■■□□□ 1.03
SDF4-201ENST00000263741 HSPA8P11142 646 aaKnown RBP21.48■■□□□ 1.03
SDF4-201ENST00000263741 GMCL1Q96IK5 515 aa21.48■■□□□ 1.03
SDF4-201ENST00000263741 GPCPD1Q9NPB8 672 aa21.48■■□□□ 1.03
SDF4-201ENST00000263741 RPS6KB1P23443 525 aa21.48■■□□□ 1.03
SDF4-201ENST00000263741 TTBK2Q6IQ55 1244 aa21.48■■□□□ 1.03
SDF4-201ENST00000263741 ANKRD13CQ8N6S4 541 aa21.48■■□□□ 1.03
SDF4-201ENST00000263741 ATG4CQ96DT6 458 aa21.48■■□□□ 1.03
SDF4-201ENST00000263741 TMEM87BQ96K49 555 aa21.48■■□□□ 1.03
SDF4-201ENST00000263741 PAGR1Q9BTK6 254 aa21.48■■□□□ 1.03
SDF4-201ENST00000263741 CPVLQ9H3G5 476 aa21.48■■□□□ 1.03
SDF4-201ENST00000263741 RXRAP19793 462 aa21.47■■□□□ 1.03
SDF4-201ENST00000263741 BACH2Q9BYV9 841 aa21.47■■□□□ 1.03
SDF4-201ENST00000263741 TXNRD2Q9NNW7 524 aa21.47■■□□□ 1.03
SDF4-201ENST00000263741 TMEM232C9JQI7 657 aa21.46■■□□□ 1.03
SDF4-201ENST00000263741 EIF5BO60841 1220 aaKnown RBP21.46■■□□□ 1.03
SDF4-201ENST00000263741 LBX1P52954 281 aa21.46■■□□□ 1.03
SDF4-201ENST00000263741 NFXL1Q6ZNB6 911 aa21.46■■□□□ 1.03
SDF4-201ENST00000263741 CFHR5Q9BXR6 569 aa21.46■■□□□ 1.03
SDF4-201ENST00000263741 HMGB1P09429 215 aaKnown RBP21.46■■□□□ 1.03
SDF4-201ENST00000263741 PSMA5P28066 241 aa21.46■■□□□ 1.03
SDF4-201ENST00000263741 SLC16A2P36021 539 aa21.46■■□□□ 1.03
SDF4-201ENST00000263741 IKQ13123 557 aaPredicted RBP21.46■■□□□ 1.03
SDF4-201ENST00000263741 Q6ZUG5 572 aa21.46■■□□□ 1.03
SDF4-201ENST00000263741 DCAF4Q8WV16 495 aa21.46■■□□□ 1.03
SDF4-201ENST00000263741 KIFC2Q96AC6 838 aa21.46■■□□□ 1.03
SDF4-201ENST00000263741 C22orf23Q9BZE7 217 aa21.46■■□□□ 1.03
SDF4-201ENST00000263741 ZSWIM6Q9HCJ5 1215 aa21.46■■□□□ 1.03
SDF4-201ENST00000263741 GPR25O00155 361 aa21.45■■□□□ 1.02
SDF4-201ENST00000263741 COG2Q14746 738 aa21.45■■□□□ 1.02
SDF4-201ENST00000263741 C17orf99Q6UX52 265 aa21.45■■□□□ 1.02
SDF4-201ENST00000263741 RUFY3Q7L099 469 aa21.45■■□□□ 1.02
SDF4-201ENST00000263741 ZNF654Q8IZM8 581 aa21.45■■□□□ 1.02
SDF4-201ENST00000263741 SLF1Q9BQI6 1058 aa21.45■■□□□ 1.02
SDF4-201ENST00000263741 WDR19Q8NEZ3 1342 aa21.45■■□□□ 1.02
SDF4-201ENST00000263741 SNHG28P0DPA3 235 aa21.44■■□□□ 1.02
SDF4-201ENST00000263741 ANAPC15P60006 121 aa21.44■■□□□ 1.02
SDF4-201ENST00000263741 SNAP25P60880 206 aa21.44■■□□□ 1.02
SDF4-201ENST00000263741 FGD1P98174 961 aa21.44■■□□□ 1.02
SDF4-201ENST00000263741 CAP1Q01518 475 aa21.44■■□□□ 1.02
SDF4-201ENST00000263741 ZNF543Q08ER8 600 aa21.44■■□□□ 1.02
SDF4-201ENST00000263741 CCDC144CPQ8IYA2 1237 aa21.44■■□□□ 1.02
SDF4-201ENST00000263741 NUP133Q8WUM0 1156 aa21.44■■□□□ 1.02
SDF4-201ENST00000263741 ZNF296Q8WUU4 475 aaPredicted RBP21.44■■□□□ 1.02
SDF4-201ENST00000263741 LARP6Q9BRS8 491 aaKnown RBP21.44■■□□□ 1.02
SDF4-201ENST00000263741 PPP1R9AQ9ULJ8 1098 aa21.44■■□□□ 1.02
SDF4-201ENST00000263741 BCRP11274 1271 aa21.44■■□□□ 1.02
SDF4-201ENST00000263741 DSG3P32926 999 aa21.44■■□□□ 1.02
SDF4-201ENST00000263741 STAG2Q8N3U4 1231 aa21.44■■□□□ 1.02
SDF4-201ENST00000263741 BTBD7Q9P203 1132 aa21.44■■□□□ 1.02
SDF4-201ENST00000263741 RBPJLQ9UBG7 517 aa21.44■■□□□ 1.02
SDF4-201ENST00000263741 BRPF3Q9ULD4 1205 aa21.44■■□□□ 1.02
SDF4-201ENST00000263741 CYP46A1Q9Y6A2 500 aa21.44■■□□□ 1.02
SDF4-201ENST00000263741 PLXNB2O15031 1838 aa21.43■■□□□ 1.02
SDF4-201ENST00000263741 CCDC69A6NI79 296 aa21.43■■□□□ 1.02
SDF4-201ENST00000263741 STAT2P52630 851 aa21.43■■□□□ 1.02
SDF4-201ENST00000263741 BRF1Q92994 677 aa21.43■■□□□ 1.02
SDF4-201ENST00000263741 CNMDO75829 334 aa21.43■■□□□ 1.02
SDF4-201ENST00000263741 CTCFP49711 727 aaPredicted RBP21.43■■□□□ 1.02
SDF4-201ENST00000263741 APOBRQ0VD83 1088 aa21.43■■□□□ 1.02
SDF4-201ENST00000263741 TROAPQ12815 778 aa21.43■■□□□ 1.02
SDF4-201ENST00000263741 CATIPQ7Z7H3 387 aa21.43■■□□□ 1.02
SDF4-201ENST00000263741 MICU3Q86XE3 530 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms