RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 CDC25CP30307 473 aa17.78■□□□□ 0.44
PRPF40B-201ENST00000261897 CUL4BQ13620 913 aa17.78■□□□□ 0.44
PRPF40B-201ENST00000261897 NEDD9Q14511 834 aa17.78■□□□□ 0.44
PRPF40B-201ENST00000261897 CSGALNACT2Q8N6G5 542 aa17.78■□□□□ 0.44
PRPF40B-201ENST00000261897 TCP11Q8WWU5 503 aa17.78■□□□□ 0.44
PRPF40B-201ENST00000261897 MS4A14Q96JA4 679 aa17.78■□□□□ 0.44
PRPF40B-201ENST00000261897 AGPAT5Q9NUQ2 364 aa17.78■□□□□ 0.44
PRPF40B-201ENST00000261897 ZSWIM5Q9P217 1185 aa17.78■□□□□ 0.44
PRPF40B-201ENST00000261897 EIF3HO15372 352 aaKnown RBP eCLIP17.77■□□□□ 0.44
PRPF40B-201ENST00000261897 TUBB2AQ13885 445 aa17.77■□□□□ 0.44
PRPF40B-201ENST00000261897 CCDC40Q4G0X9 1142 aa17.77■□□□□ 0.44
PRPF40B-201ENST00000261897 EHBP1Q8NDI1 1231 aa17.77■□□□□ 0.44
PRPF40B-201ENST00000261897 TUBB2BQ9BVA1 445 aa17.77■□□□□ 0.44
PRPF40B-201ENST00000261897 HPSEQ9Y251 543 aa17.77■□□□□ 0.44
PRPF40B-201ENST00000261897 UBA7P41226 1012 aa17.77■□□□□ 0.44
PRPF40B-201ENST00000261897 SPAG1Q07617 926 aa17.77■□□□□ 0.44
PRPF40B-201ENST00000261897 PTGDRQ13258 359 aa17.77■□□□□ 0.44
PRPF40B-201ENST00000261897 PRPF4BQ13523 1007 aaKnown RBP17.77■□□□□ 0.44
PRPF40B-201ENST00000261897 NBPF14Q5TI25 921 aa17.77■□□□□ 0.44
PRPF40B-201ENST00000261897 MICAL1Q8TDZ2 1067 aa17.77■□□□□ 0.44
PRPF40B-201ENST00000261897 FAM184BQ9ULE4 1060 aa17.77■□□□□ 0.44
PRPF40B-201ENST00000261897 PRKAB2O43741 272 aa17.77■□□□□ 0.43
PRPF40B-201ENST00000261897 TATP17735 454 aaPredicted RBP17.77■□□□□ 0.43
PRPF40B-201ENST00000261897 PTPREP23469 700 aa17.77■□□□□ 0.43
PRPF40B-201ENST00000261897 TUBB4BP68371 445 aa17.77■□□□□ 0.43
PRPF40B-201ENST00000261897 PPP1R7Q15435 360 aa17.77■□□□□ 0.43
PRPF40B-201ENST00000261897 CCNI2Q6ZMN8 369 aaPredicted RBP17.77■□□□□ 0.43
PRPF40B-201ENST00000261897 IP6K1Q92551 441 aa17.77■□□□□ 0.43
PRPF40B-201ENST00000261897 PACSIN2Q9UNF0 486 aaPredicted RBP17.77■□□□□ 0.43
PRPF40B-201ENST00000261897 MARCH6O60337 910 aa17.76■□□□□ 0.43
PRPF40B-201ENST00000261897 ERCC5P28715 1186 aaPredicted RBP17.76■□□□□ 0.43
PRPF40B-201ENST00000261897 USP5P45974 858 aa17.76■□□□□ 0.43
PRPF40B-201ENST00000261897 TMC4Q7Z404 712 aa17.76■□□□□ 0.43
PRPF40B-201ENST00000261897 SELENOSQ9BQE4 189 aa17.76■□□□□ 0.43
PRPF40B-201ENST00000261897 SALL1Q9NSC2 1324 aa17.76■□□□□ 0.43
PRPF40B-201ENST00000261897 PDE2AO00408 941 aaPredicted RBP17.76■□□□□ 0.43
PRPF40B-201ENST00000261897 PARP1P09874 1014 aaKnown RBP17.76■□□□□ 0.43
PRPF40B-201ENST00000261897 PDHBP11177 359 aa17.76■□□□□ 0.43
PRPF40B-201ENST00000261897 OR2W6PQ8NHA6 318 aa17.76■□□□□ 0.43
PRPF40B-201ENST00000261897 NOC4LQ9BVI4 516 aaKnown RBP17.76■□□□□ 0.43
PRPF40B-201ENST00000261897 ZNF18P17022 549 aa17.76■□□□□ 0.43
PRPF40B-201ENST00000261897 PAX7P23759 505 aa17.76■□□□□ 0.43
PRPF40B-201ENST00000261897 ARHGAP25P42331 645 aa17.76■□□□□ 0.43
PRPF40B-201ENST00000261897 CCDC47Q96A33 483 aaKnown RBP17.76■□□□□ 0.43
PRPF40B-201ENST00000261897 HDLBPQ00341 1268 aaKnown RBP17.75■□□□□ 0.43
PRPF40B-201ENST00000261897 IQCA1Q86XH1 822 aa17.75■□□□□ 0.43
PRPF40B-201ENST00000261897 SYNE4Q8N205 404 aa17.75■□□□□ 0.43
PRPF40B-201ENST00000261897 KRT12Q99456 494 aa17.75■□□□□ 0.43
PRPF40B-201ENST00000261897 NACAP1Q9BZK3 213 aa17.75■□□□□ 0.43
PRPF40B-201ENST00000261897 BABAM1Q9NWV8 329 aa17.75■□□□□ 0.43
PRPF40B-201ENST00000261897 NEDD4P46934 1319 aa17.75■□□□□ 0.43
PRPF40B-201ENST00000261897 BUB1BO60566 1050 aaPredicted RBP17.75■□□□□ 0.43
PRPF40B-201ENST00000261897 FTCDO95954 541 aa17.75■□□□□ 0.43
PRPF40B-201ENST00000261897 ZFYP08048 801 aaPredicted RBP17.75■□□□□ 0.43
PRPF40B-201ENST00000261897 NKX2-3Q8TAU0 364 aa17.75■□□□□ 0.43
PRPF40B-201ENST00000261897 MED15Q96RN5 788 aa17.75■□□□□ 0.43
PRPF40B-201ENST00000261897 FBXO2Q9UK22 296 aaPredicted RBP17.75■□□□□ 0.43
PRPF40B-201ENST00000261897 MROH1Q8NDA8 1641 aa17.74■□□□□ 0.43
PRPF40B-201ENST00000261897 CCDC196A0A1B0GTZ2 297 aa17.74■□□□□ 0.43
PRPF40B-201ENST00000261897 PSMA7O14818 248 aa17.74■□□□□ 0.43
PRPF40B-201ENST00000261897 HEXIM1O94992 359 aaKnown RBP17.74■□□□□ 0.43
PRPF40B-201ENST00000261897 MYBL1P10243 752 aa17.74■□□□□ 0.43
PRPF40B-201ENST00000261897 RASGRP4Q8TDF6 673 aa17.74■□□□□ 0.43
PRPF40B-201ENST00000261897 TAF4BQ92750 862 aa17.74■□□□□ 0.43
PRPF40B-201ENST00000261897 CEP89Q96ST8 783 aa17.74■□□□□ 0.43
PRPF40B-201ENST00000261897 GGT7Q9UJ14 662 aa17.74■□□□□ 0.43
PRPF40B-201ENST00000261897 MMP1P03956 469 aa17.74■□□□□ 0.43
PRPF40B-201ENST00000261897 PLEKP08567 350 aaPredicted RBP17.74■□□□□ 0.43
PRPF40B-201ENST00000261897 NR1D1P20393 614 aa17.74■□□□□ 0.43
PRPF40B-201ENST00000261897 ASIC1P78348 528 aa17.74■□□□□ 0.43
PRPF40B-201ENST00000261897 THOC1Q96FV9 657 aaKnown RBP17.74■□□□□ 0.43
PRPF40B-201ENST00000261897 KLC4Q9NSK0 619 aa17.74■□□□□ 0.43
PRPF40B-201ENST00000261897 SH2B2O14492 632 aaPredicted RBP17.74■□□□□ 0.43
PRPF40B-201ENST00000261897 MAGEA1P43355 309 aa17.74■□□□□ 0.43
PRPF40B-201ENST00000261897 RASSF7Q02833 373 aa17.74■□□□□ 0.43
PRPF40B-201ENST00000261897 RRAGAQ7L523 313 aa17.74■□□□□ 0.43
PRPF40B-201ENST00000261897 ADAT2Q7Z6V5 191 aaKnown RBP17.74■□□□□ 0.43
PRPF40B-201ENST00000261897 RNPC3Q96LT9 517 aaKnown RBP17.74■□□□□ 0.43
PRPF40B-201ENST00000261897 NHEJ1Q9H9Q4 299 aaPredicted RBP17.74■□□□□ 0.43
PRPF40B-201ENST00000261897 STRN4Q9NRL3 753 aa17.74■□□□□ 0.43
PRPF40B-201ENST00000261897 HAUS2Q9NVX0 235 aa17.74■□□□□ 0.43
PRPF40B-201ENST00000261897 GOLGA8KD6RF30 607 aa17.73■□□□□ 0.43
PRPF40B-201ENST00000261897 EPS15P42566 896 aa17.73■□□□□ 0.43
PRPF40B-201ENST00000261897 TOB1P50616 345 aaPredicted RBP17.73■□□□□ 0.43
PRPF40B-201ENST00000261897 MAP3K14Q99558 947 aa17.73■□□□□ 0.43
PRPF40B-201ENST00000261897 A0A1B0GUA9 196 aa17.73■□□□□ 0.43
PRPF40B-201ENST00000261897 MEFVO15553 781 aaPredicted RBP17.73■□□□□ 0.43
PRPF40B-201ENST00000261897 KRT2P35908 639 aa17.73■□□□□ 0.43
PRPF40B-201ENST00000261897 BIRC2Q13490 618 aa17.73■□□□□ 0.43
PRPF40B-201ENST00000261897 TCP11X2Q5H9J9 407 aa17.73■□□□□ 0.43
PRPF40B-201ENST00000261897 TTC38Q5R3I4 469 aa17.73■□□□□ 0.43
PRPF40B-201ENST00000261897 HIBCHQ6NVY1 386 aaPredicted RBP17.73■□□□□ 0.43
PRPF40B-201ENST00000261897 A0A087X0B3 334 aa17.73■□□□□ 0.43
PRPF40B-201ENST00000261897 KCNA6P17658 529 aa17.73■□□□□ 0.43
PRPF40B-201ENST00000261897 TMOD1P28289 359 aa17.73■□□□□ 0.43
PRPF40B-201ENST00000261897 ELF1P32519 619 aa17.73■□□□□ 0.43
PRPF40B-201ENST00000261897 DPYDQ12882 1025 aa17.73■□□□□ 0.43
PRPF40B-201ENST00000261897 TSEN2Q8NCE0 465 aaKnown RBP17.73■□□□□ 0.43
PRPF40B-201ENST00000261897 CABLES1Q8TDN4 633 aa17.73■□□□□ 0.43
PRPF40B-201ENST00000261897 CCDC51Q96ER9 411 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms