RNA–Protein interactions for RNA: ENST00000261644.8

CDRT1-201, CMT1A duplicated region transcript 1, humanhuman

TSL 5

Gene CDRT1, Length 902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-201ENST00000261644 PRPF40AO75400 957 aaKnown RBP5.06□□□□□ -1.6
CDRT1-201ENST00000261644 LDHBP07195 334 aaKnown RBP5.06□□□□□ -1.6
CDRT1-201ENST00000261644 LMNB1P20700 586 aa5.06□□□□□ -1.6
CDRT1-201ENST00000261644 SEPT6Q14141 434 aa5.06□□□□□ -1.6
CDRT1-201ENST00000261644 TMEM201Q5SNT2 666 aa5.06□□□□□ -1.6
CDRT1-201ENST00000261644 SLFN12Q8IYM2 578 aa5.06□□□□□ -1.6
CDRT1-201ENST00000261644 BAHD1Q8TBE0 780 aaPredicted RBP5.06□□□□□ -1.6
CDRT1-201ENST00000261644 XAGE3Q8WTP9 111 aa5.06□□□□□ -1.6
CDRT1-201ENST00000261644 RNF141Q8WVD5 230 aa5.06□□□□□ -1.6
CDRT1-201ENST00000261644 KCNN1Q92952 543 aa5.06□□□□□ -1.6
CDRT1-201ENST00000261644 ACSF2Q96CM8 615 aaPredicted RBP5.06□□□□□ -1.6
CDRT1-201ENST00000261644 MCOLN1Q9GZU1 580 aa5.06□□□□□ -1.6
CDRT1-201ENST00000261644 MIR1-1HGQ9H1L0 117 aa5.06□□□□□ -1.6
CDRT1-201ENST00000261644 USP35Q9P2H5 1018 aa5.06□□□□□ -1.6
CDRT1-201ENST00000261644 YBX2Q9Y2T7 364 aaKnown RBP5.06□□□□□ -1.6
CDRT1-201ENST00000261644 ZNF281Q9Y2X9 895 aa5.06□□□□□ -1.6
CDRT1-201ENST00000261644 PCDHB5Q9Y5E4 795 aa5.06□□□□□ -1.6
CDRT1-201ENST00000261644 AK5Q9Y6K8 562 aa5.06□□□□□ -1.6
CDRT1-201ENST00000261644 SAMD9Q5K651 1589 aa5.06□□□□□ -1.6
CDRT1-201ENST00000261644 MYOM3Q5VTT5 1437 aa5.06□□□□□ -1.6
CDRT1-201ENST00000261644 SMG6Q86US8 1419 aaKnown RBP5.06□□□□□ -1.6
CDRT1-201ENST00000261644 PRR36Q9H6K5 1346 aa5.05□□□□□ -1.6
CDRT1-201ENST00000261644 TEX51A0A1B0GUA7 166 aa5.05□□□□□ -1.6
CDRT1-201ENST00000261644 RBM47A0AV96 593 aaKnown RBP5.05□□□□□ -1.6
CDRT1-201ENST00000261644 ERCC3P19447 782 aa5.05□□□□□ -1.6
CDRT1-201ENST00000261644 MFAP1P55081 439 aaKnown RBP5.05□□□□□ -1.6
CDRT1-201ENST00000261644 CTSWP56202 376 aa5.05□□□□□ -1.6
CDRT1-201ENST00000261644 DLG4P78352 724 aa5.05□□□□□ -1.6
CDRT1-201ENST00000261644 EGR3Q06889 387 aa5.05□□□□□ -1.6
CDRT1-201ENST00000261644 SPPL2CQ8IUH8 684 aa5.05□□□□□ -1.6
CDRT1-201ENST00000261644 ANKS4BQ8N8V4 417 aa5.05□□□□□ -1.6
CDRT1-201ENST00000261644 RGS22Q8NE09 1264 aa5.05□□□□□ -1.6
CDRT1-201ENST00000261644 INTS4Q96HW7 963 aaKnown RBP5.05□□□□□ -1.6
CDRT1-201ENST00000261644 DPH2Q9BQC3 489 aaPredicted RBP5.05□□□□□ -1.6
CDRT1-201ENST00000261644 NOC4LQ9BVI4 516 aaKnown RBP5.05□□□□□ -1.6
CDRT1-201ENST00000261644 ZNF552Q9H707 407 aaPredicted RBP5.05□□□□□ -1.6
CDRT1-201ENST00000261644 PRKRIP1Q9H875 184 aaPredicted RBP5.05□□□□□ -1.6
CDRT1-201ENST00000261644 GRIN2BQ13224 1484 aa5.05□□□□□ -1.6
CDRT1-201ENST00000261644 PTPRKQ15262 1439 aa5.05□□□□□ -1.6
CDRT1-201ENST00000261644 CNTLNQ9NXG0 1405 aa5.05□□□□□ -1.6
CDRT1-201ENST00000261644 PCF11O94913 1555 aaKnown RBP5.04□□□□□ -1.6
CDRT1-201ENST00000261644 DNMBPQ6XZF7 1577 aa5.04□□□□□ -1.6
CDRT1-201ENST00000261644 WASHC2AQ641Q2 1341 aa5.04□□□□□ -1.6
CDRT1-201ENST00000261644 ZMYM4Q5VZL5 1548 aa5.04□□□□□ -1.6
CDRT1-201ENST00000261644 UGGT2Q9NYU1 1516 aa5.04□□□□□ -1.6
CDRT1-201ENST00000261644 POLR1AO95602 1720 aaPredicted RBP5.04□□□□□ -1.6
CDRT1-201ENST00000261644 MYOCOSA0A1B0GUC4 107 aa5.04□□□□□ -1.6
CDRT1-201ENST00000261644 TFE3P19532 575 aaPredicted RBP5.04□□□□□ -1.6
CDRT1-201ENST00000261644 HOXA5P20719 270 aa5.04□□□□□ -1.6
CDRT1-201ENST00000261644 BUD31P41223 144 aaPredicted RBP5.04□□□□□ -1.6
CDRT1-201ENST00000261644 ST13P50502 369 aaKnown RBP5.04□□□□□ -1.6
CDRT1-201ENST00000261644 YARSP54577 528 aaKnown RBP5.04□□□□□ -1.6
CDRT1-201ENST00000261644 ASPNQ9BXN1 380 aa5.04□□□□□ -1.6
CDRT1-201ENST00000261644 KCNK12Q9HB15 430 aa5.04□□□□□ -1.6
CDRT1-201ENST00000261644 PARD6AQ9NPB6 346 aa5.04□□□□□ -1.6
CDRT1-201ENST00000261644 KIF21AQ7Z4S6 1674 aa5.04□□□□□ -1.6
CDRT1-201ENST00000261644 HECW1Q76N89 1606 aa5.04□□□□□ -1.6
CDRT1-201ENST00000261644 EHBP1L1Q8N3D4 1523 aa5.03□□□□□ -1.6
CDRT1-201ENST00000261644 GCC2Q8IWJ2 1684 aa5.03□□□□□ -1.6
CDRT1-201ENST00000261644 DENND4BO75064 1496 aaPredicted RBP5.03□□□□□ -1.6
CDRT1-201ENST00000261644 RPRD2Q5VT52 1461 aaKnown RBP5.03□□□□□ -1.6
CDRT1-201ENST00000261644 WASH4PA8MWX3 477 aa5.03□□□□□ -1.6
CDRT1-201ENST00000261644 CDK11BP21127 795 aaKnown RBP5.03□□□□□ -1.6
CDRT1-201ENST00000261644 DUSP4Q13115 394 aa5.03□□□□□ -1.6
CDRT1-201ENST00000261644 CCDC27Q2M243 656 aa5.03□□□□□ -1.6
CDRT1-201ENST00000261644 LINC01599Q8WXQ3 324 aa5.03□□□□□ -1.6
CDRT1-201ENST00000261644 SHISA4Q96DD7 197 aa5.03□□□□□ -1.6
CDRT1-201ENST00000261644 C20orf173Q96LM9 149 aa5.03□□□□□ -1.6
CDRT1-201ENST00000261644 KCNC2Q96PR1 638 aa5.03□□□□□ -1.6
CDRT1-201ENST00000261644 GCM1Q9NP62 436 aa5.03□□□□□ -1.6
CDRT1-201ENST00000261644 PCDHA11Q9Y5I1 949 aa5.03□□□□□ -1.6
CDRT1-201ENST00000261644 SUPT6HQ7KZ85 1726 aaKnown RBP5.03□□□□□ -1.6
CDRT1-201ENST00000261644 ROCK2O75116 1388 aaKnown RBP5.03□□□□□ -1.6
CDRT1-201ENST00000261644 CCDC7Q96M83 1385 aa5.03□□□□□ -1.6
CDRT1-201ENST00000261644 ANKRD30BQ9BXX2 1392 aa5.03□□□□□ -1.6
CDRT1-201ENST00000261644 CTTNBP2Q8WZ74 1663 aa5.02□□□□□ -1.61
CDRT1-201ENST00000261644 CILPO75339 1184 aa5.02□□□□□ -1.61
CDRT1-201ENST00000261644 LTKP29376 864 aa5.02□□□□□ -1.61
CDRT1-201ENST00000261644 TRHRP34981 398 aaPredicted RBP5.02□□□□□ -1.61
CDRT1-201ENST00000261644 TEKQ02763 1124 aa5.02□□□□□ -1.61
CDRT1-201ENST00000261644 TIGD5Q53EQ6 642 aa5.02□□□□□ -1.61
CDRT1-201ENST00000261644 TMEM151BQ8IW70 566 aa5.02□□□□□ -1.61
CDRT1-201ENST00000261644 ENOX1Q8TC92 643 aaKnown RBP5.02□□□□□ -1.61
CDRT1-201ENST00000261644 SYTL4Q96C24 671 aaPredicted RBP5.02□□□□□ -1.61
CDRT1-201ENST00000261644 WASHC2CQ9Y4E1 1318 aa5.01□□□□□ -1.61
CDRT1-201ENST00000261644 UHRF1BP1Q6BDS2 1440 aa5.01□□□□□ -1.61
CDRT1-201ENST00000261644 EIF5BO60841 1220 aaKnown RBP5.01□□□□□ -1.61
CDRT1-201ENST00000261644 FAM50AQ14320 339 aaKnown RBP5.01□□□□□ -1.61
CDRT1-201ENST00000261644 ZNF385BQ569K4 471 aa5.01□□□□□ -1.61
CDRT1-201ENST00000261644 PHC3Q8NDX5 983 aa5.01□□□□□ -1.61
CDRT1-201ENST00000261644 IPO9Q96P70 1041 aaKnown RBP5.01□□□□□ -1.61
CDRT1-201ENST00000261644 G6PC3Q9BUM1 346 aa5.01□□□□□ -1.61
CDRT1-201ENST00000261644 C19orf44Q9H6X5 657 aa5.01□□□□□ -1.61
CDRT1-201ENST00000261644 MTUS2Q5JR59 1369 aa5.01□□□□□ -1.61
CDRT1-201ENST00000261644 FAM221AA4D161 298 aa5□□□□□ -1.61
CDRT1-201ENST00000261644 RFXAPO00287 272 aa5□□□□□ -1.61
CDRT1-201ENST00000261644 HSPA5P11021 654 aaKnown RBP5□□□□□ -1.61
CDRT1-201ENST00000261644 TCERG1LQ5VWI1 586 aa5□□□□□ -1.61
CDRT1-201ENST00000261644 FAM13CQ8NE31 585 aa5□□□□□ -1.61
CDRT1-201ENST00000261644 RELTQ969Z4 430 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms