RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 SNHG28P0DPA3 235 aa25.72■■□□□ 1.71
SIX3-201ENST00000260653 TYW1BQ6NUM6 668 aa25.72■■□□□ 1.71
SIX3-201ENST00000260653 TNFRSF25Q93038 417 aa25.72■■□□□ 1.71
SIX3-201ENST00000260653 TSPY26PQ9H489 355 aa25.72■■□□□ 1.71
SIX3-201ENST00000260653 NBPF9Q3BBW0 867 aa25.71■■□□□ 1.71
SIX3-201ENST00000260653 NOM1Q5C9Z4 860 aaKnown RBP25.71■■□□□ 1.71
SIX3-201ENST00000260653 AXDND1Q5T1B0 1012 aaPredicted RBP25.71■■□□□ 1.71
SIX3-201ENST00000260653 WWC2Q6AWC2 1192 aa25.71■■□□□ 1.71
SIX3-201ENST00000260653 CCDC73Q6ZRK6 1079 aa25.71■■□□□ 1.71
SIX3-201ENST00000260653 FAM151AQ8WW52 585 aa25.71■■□□□ 1.71
SIX3-201ENST00000260653 ZBED3Q96IU2 234 aaPredicted RBP25.71■■□□□ 1.71
SIX3-201ENST00000260653 UBA5Q9GZZ9 404 aa25.71■■□□□ 1.71
SIX3-201ENST00000260653 A0A1W2PQ27 194 aa25.71■■□□□ 1.71
SIX3-201ENST00000260653 A0A1W2PQ64 194 aa25.71■■□□□ 1.71
SIX3-201ENST00000260653 A0A1W2PQD8 194 aa25.71■■□□□ 1.71
SIX3-201ENST00000260653 WNT10BO00744 389 aa25.71■■□□□ 1.71
SIX3-201ENST00000260653 ADAMTS3O15072 1205 aa25.71■■□□□ 1.71
SIX3-201ENST00000260653 MRPS27Q92552 414 aaKnown RBP25.71■■□□□ 1.71
SIX3-201ENST00000260653 CLSTN2Q9H4D0 955 aa25.71■■□□□ 1.71
SIX3-201ENST00000260653 MYOZ2Q9NPC6 264 aa25.71■■□□□ 1.71
SIX3-201ENST00000260653 PDE4CQ08493 712 aa25.7■■□□□ 1.71
SIX3-201ENST00000260653 SNW1Q13573 536 aaKnown RBP25.7■■□□□ 1.71
SIX3-201ENST00000260653 SEPT2Q15019 361 aa25.7■■□□□ 1.71
SIX3-201ENST00000260653 HEATR3Q7Z4Q2 680 aa25.7■■□□□ 1.71
SIX3-201ENST00000260653 TNMDQ9H2S6 317 aa25.7■■□□□ 1.71
SIX3-201ENST00000260653 PCDHB6Q9Y5E3 794 aa25.7■■□□□ 1.71
SIX3-201ENST00000260653 ATP2B1P20020 1258 aa25.7■■□□□ 1.7
SIX3-201ENST00000260653 ASPRV1Q53RT3 343 aa25.7■■□□□ 1.7
SIX3-201ENST00000260653 HOMER1Q86YM7 354 aa25.7■■□□□ 1.7
SIX3-201ENST00000260653 CDAN1Q8IWY9 1227 aa25.7■■□□□ 1.7
SIX3-201ENST00000260653 ENGASEQ8NFI3 743 aa25.7■■□□□ 1.7
SIX3-201ENST00000260653 SH3GLB2Q9NR46 395 aa25.7■■□□□ 1.7
SIX3-201ENST00000260653 PPP6R2O75170 966 aa25.69■■□□□ 1.7
SIX3-201ENST00000260653 EEF2P13639 858 aaKnown RBP25.69■■□□□ 1.7
SIX3-201ENST00000260653 FAM160A1Q05DH4 1040 aa25.69■■□□□ 1.7
SIX3-201ENST00000260653 RRP1BQ14684 758 aaKnown RBP25.69■■□□□ 1.7
SIX3-201ENST00000260653 VAT1LQ9HCJ6 419 aa25.69■■□□□ 1.7
SIX3-201ENST00000260653 A0A1B0GVL5 298 aa25.69■■□□□ 1.7
SIX3-201ENST00000260653 JAG1P78504 1218 aa25.69■■□□□ 1.7
SIX3-201ENST00000260653 ABCB5Q2M3G0 1257 aa25.69■■□□□ 1.7
SIX3-201ENST00000260653 TMEM39BQ9GZU3 492 aa25.69■■□□□ 1.7
SIX3-201ENST00000260653 KANSL2Q9H9L4 492 aa25.69■■□□□ 1.7
SIX3-201ENST00000260653 MYO1BO43795 1136 aa25.68■■□□□ 1.7
SIX3-201ENST00000260653 EGFRP00533 1210 aa25.68■■□□□ 1.7
SIX3-201ENST00000260653 MAP3K11Q16584 847 aa25.68■■□□□ 1.7
SIX3-201ENST00000260653 TMEM179Q6ZVK1 233 aa25.68■■□□□ 1.7
SIX3-201ENST00000260653 SPON1Q9HCB6 807 aa25.68■■□□□ 1.7
SIX3-201ENST00000260653 GPCPD1Q9NPB8 672 aa25.68■■□□□ 1.7
SIX3-201ENST00000260653 BARHL2Q9NY43 387 aa25.68■■□□□ 1.7
SIX3-201ENST00000260653 SMARCA1P28370 1054 aa25.68■■□□□ 1.7
SIX3-201ENST00000260653 ZNF543Q08ER8 600 aa25.68■■□□□ 1.7
SIX3-201ENST00000260653 PPP4R3BQ5MIZ7 849 aa25.68■■□□□ 1.7
SIX3-201ENST00000260653 FKBP1CQ5VVH2 108 aa25.68■■□□□ 1.7
SIX3-201ENST00000260653 JMYQ8N9B5 988 aa25.68■■□□□ 1.7
SIX3-201ENST00000260653 RRP36Q96EU6 259 aaKnown RBP25.68■■□□□ 1.7
SIX3-201ENST00000260653 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.68■■□□□ 1.7
SIX3-201ENST00000260653 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.68■■□□□ 1.7
SIX3-201ENST00000260653 HERC5Q9UII4 1024 aaKnown RBP25.68■■□□□ 1.7
SIX3-201ENST00000260653 STXBP3O00186 592 aa25.67■■□□□ 1.7
SIX3-201ENST00000260653 CKAP2LQ8IYA6 745 aa25.67■■□□□ 1.7
SIX3-201ENST00000260653 PIGSQ96S52 555 aa25.67■■□□□ 1.7
SIX3-201ENST00000260653 FUCA2Q9BTY2 467 aa25.67■■□□□ 1.7
SIX3-201ENST00000260653 FZD9O00144 591 aa25.67■■□□□ 1.7
SIX3-201ENST00000260653 CALML3P27482 149 aa25.67■■□□□ 1.7
SIX3-201ENST00000260653 NDUFA8P51970 172 aa25.67■■□□□ 1.7
SIX3-201ENST00000260653 ICA1Q05084 483 aa25.67■■□□□ 1.7
SIX3-201ENST00000260653 SIAH1Q8IUQ4 282 aa25.67■■□□□ 1.7
SIX3-201ENST00000260653 RIOX1Q9H6W3 641 aa25.67■■□□□ 1.7
SIX3-201ENST00000260653 NYAP2Q9P242 653 aa25.67■■□□□ 1.7
SIX3-201ENST00000260653 GH2P01242 217 aa25.66■■□□□ 1.7
SIX3-201ENST00000260653 GMPSP49915 693 aaPredicted RBP25.66■■□□□ 1.7
SIX3-201ENST00000260653 RNF214Q8ND24 703 aa25.66■■□□□ 1.7
SIX3-201ENST00000260653 GJA3Q9Y6H8 435 aa25.66■■□□□ 1.7
SIX3-201ENST00000260653 RPS12P25398 132 aaKnown RBP25.66■■□□□ 1.7
SIX3-201ENST00000260653 ZNF280AP59817 542 aaPredicted RBP25.66■■□□□ 1.7
SIX3-201ENST00000260653 RBM26Q5T8P6 1007 aaKnown RBP25.66■■□□□ 1.7
SIX3-201ENST00000260653 FMR1NBQ8N0W7 255 aaPredicted RBP25.66■■□□□ 1.7
SIX3-201ENST00000260653 CLIC6Q96NY7 704 aa25.66■■□□□ 1.7
SIX3-201ENST00000260653 SEC63Q9UGP8 760 aaKnown RBP25.66■■□□□ 1.7
SIX3-201ENST00000260653 SCAF8Q9UPN6 1271 aaKnown RBP25.66■■□□□ 1.7
SIX3-201ENST00000260653 WNT7AO00755 349 aa25.65■■□□□ 1.7
SIX3-201ENST00000260653 PIK3AP1Q6ZUJ8 805 aa25.65■■□□□ 1.7
SIX3-201ENST00000260653 BLIDQ8IZY5 108 aa25.65■■□□□ 1.7
SIX3-201ENST00000260653 MKL1Q969V6 931 aa25.65■■□□□ 1.7
SIX3-201ENST00000260653 PCDHA4Q9UN74 947 aa25.65■■□□□ 1.7
SIX3-201ENST00000260653 CCDC96Q2M329 555 aa25.65■■□□□ 1.7
SIX3-201ENST00000260653 RBM43Q6ZSC3 357 aaKnown RBP25.65■■□□□ 1.7
SIX3-201ENST00000260653 FAM83AQ86UY5 434 aa25.65■■□□□ 1.7
SIX3-201ENST00000260653 CCDC148Q8NFR7 591 aa25.65■■□□□ 1.7
SIX3-201ENST00000260653 RAD21O60216 631 aa25.64■■□□□ 1.7
SIX3-201ENST00000260653 CMA1P23946 247 aa25.64■■□□□ 1.7
SIX3-201ENST00000260653 TTBK2Q6IQ55 1244 aa25.64■■□□□ 1.7
SIX3-201ENST00000260653 KCTD1Q719H9 257 aa25.64■■□□□ 1.7
SIX3-201ENST00000260653 MICALL2Q8IY33 904 aa25.64■■□□□ 1.7
SIX3-201ENST00000260653 RASGRP4Q8TDF6 673 aa25.64■■□□□ 1.7
SIX3-201ENST00000260653 TRIM75PA6NK02 468 aa25.64■■□□□ 1.69
SIX3-201ENST00000260653 KINO60870 393 aaKnown RBP25.64■■□□□ 1.69
SIX3-201ENST00000260653 SHC4Q6S5L8 630 aa25.64■■□□□ 1.69
SIX3-201ENST00000260653 ZNF541Q9H0D2 1346 aa25.64■■□□□ 1.69
SIX3-201ENST00000260653 PFKFB1P16118 471 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms