RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 TMEM132BQ14DG7 1078 aa22.73■■□□□ 1.23
TM6SF1-201ENST00000258909 FAM83BQ5T0W9 1011 aa22.73■■□□□ 1.23
TM6SF1-201ENST00000258909 SHCBP1Q8NEM2 672 aa22.73■■□□□ 1.23
TM6SF1-201ENST00000258909 NUP88Q99567 741 aaPredicted RBP22.73■■□□□ 1.23
TM6SF1-201ENST00000258909 PCDH10Q9P2E7 1040 aa22.73■■□□□ 1.23
TM6SF1-201ENST00000258909 STAP2Q9UGK3 403 aa22.73■■□□□ 1.23
TM6SF1-201ENST00000258909 ZMYND8Q9ULU4 1186 aaPredicted RBP22.73■■□□□ 1.23
TM6SF1-201ENST00000258909 STRNO43815 780 aa22.73■■□□□ 1.23
TM6SF1-201ENST00000258909 COBLO75128 1261 aa22.73■■□□□ 1.23
TM6SF1-201ENST00000258909 GNAT2P19087 354 aa22.73■■□□□ 1.23
TM6SF1-201ENST00000258909 ANKRD45Q5TZF3 282 aa22.73■■□□□ 1.23
TM6SF1-201ENST00000258909 IFNL3Q8IZI9 196 aa22.73■■□□□ 1.23
TM6SF1-201ENST00000258909 TRPV1Q8NER1 839 aa22.73■■□□□ 1.23
TM6SF1-201ENST00000258909 ROBO3Q96MS0 1386 aa22.72■■□□□ 1.23
TM6SF1-201ENST00000258909 ZNFX1Q9P2E3 1918 aaKnown RBP22.72■■□□□ 1.23
TM6SF1-201ENST00000258909 PATL2C9JE40 543 aaKnown RBP22.72■■□□□ 1.23
TM6SF1-201ENST00000258909 LRRFIP1Q32MZ4 808 aaKnown RBP22.72■■□□□ 1.23
TM6SF1-201ENST00000258909 MROH8Q9H579 483 aa22.72■■□□□ 1.23
TM6SF1-201ENST00000258909 ZNF236Q9UL36 1845 aa22.71■■□□□ 1.23
TM6SF1-201ENST00000258909 SYN1P17600 705 aa22.71■■□□□ 1.23
TM6SF1-201ENST00000258909 DDX20Q9UHI6 824 aaKnown RBP22.71■■□□□ 1.23
TM6SF1-201ENST00000258909 ADAMTS5Q9UNA0 930 aa22.71■■□□□ 1.23
TM6SF1-201ENST00000258909 MYH4Q9Y623 1939 aa22.7■■□□□ 1.22
TM6SF1-201ENST00000258909 IGHA2P01877 340 aa22.7■■□□□ 1.22
TM6SF1-201ENST00000258909 COL6A1P12109 1028 aa22.7■■□□□ 1.22
TM6SF1-201ENST00000258909 ZNF444Q8N0Y2 327 aaPredicted RBP22.7■■□□□ 1.22
TM6SF1-201ENST00000258909 CLIP2Q9UDT6 1046 aa22.7■■□□□ 1.22
TM6SF1-201ENST00000258909 PPP1R9AQ9ULJ8 1098 aa22.7■■□□□ 1.22
TM6SF1-201ENST00000258909 LAMA3Q16787 3333 aa22.69■■□□□ 1.22
TM6SF1-201ENST00000258909 SALL3Q9BXA9 1300 aa22.69■■□□□ 1.22
TM6SF1-201ENST00000258909 F5H6K3 240 aa22.69■■□□□ 1.22
TM6SF1-201ENST00000258909 VWA5AO00534 786 aa22.69■■□□□ 1.22
TM6SF1-201ENST00000258909 KLRC3Q07444 240 aa22.69■■□□□ 1.22
TM6SF1-201ENST00000258909 ZMYM1Q5SVZ6 1142 aa22.69■■□□□ 1.22
TM6SF1-201ENST00000258909 ANO1Q5XXA6 986 aa22.69■■□□□ 1.22
TM6SF1-201ENST00000258909 NYAP2Q9P242 653 aa22.69■■□□□ 1.22
TM6SF1-201ENST00000258909 ZBTB47Q9UFB7 747 aaPredicted RBP22.69■■□□□ 1.22
TM6SF1-201ENST00000258909 FCER1AP12319 257 aa22.68■■□□□ 1.22
TM6SF1-201ENST00000258909 CYBAP13498 195 aa22.68■■□□□ 1.22
TM6SF1-201ENST00000258909 PRAMEF19Q5SWL8 479 aa22.68■■□□□ 1.22
TM6SF1-201ENST00000258909 OLFML2BQ68BL8 750 aa22.68■■□□□ 1.22
TM6SF1-201ENST00000258909 CCDC129Q6ZRS4 1044 aa22.68■■□□□ 1.22
TM6SF1-201ENST00000258909 NACAP1Q9BZK3 213 aa22.68■■□□□ 1.22
TM6SF1-201ENST00000258909 IGKV6D-41A0A0C4DH26 115 aa22.67■■□□□ 1.22
TM6SF1-201ENST00000258909 SLC25A27O95847 323 aa22.67■■□□□ 1.22
TM6SF1-201ENST00000258909 NDUFB10O96000 172 aa22.67■■□□□ 1.22
TM6SF1-201ENST00000258909 STAT3P40763 770 aa22.67■■□□□ 1.22
TM6SF1-201ENST00000258909 LRRC26Q2I0M4 334 aa22.67■■□□□ 1.22
TM6SF1-201ENST00000258909 CEP95Q96GE4 821 aa22.67■■□□□ 1.22
TM6SF1-201ENST00000258909 PGK2P07205 417 aa22.66■■□□□ 1.22
TM6SF1-201ENST00000258909 RIOX2Q8IUF8 465 aa22.66■■□□□ 1.22
TM6SF1-201ENST00000258909 ABRAQ8N0Z2 381 aa22.66■■□□□ 1.22
TM6SF1-201ENST00000258909 REPS2Q8NFH8 660 aa22.66■■□□□ 1.22
TM6SF1-201ENST00000258909 MMP19Q99542 508 aa22.66■■□□□ 1.22
TM6SF1-201ENST00000258909 SENP6Q9GZR1 1112 aaPredicted RBP22.66■■□□□ 1.22
TM6SF1-201ENST00000258909 NAPBQ9H115 298 aa22.66■■□□□ 1.22
TM6SF1-201ENST00000258909 SLC5A4Q9NY91 659 aa22.66■■□□□ 1.22
TM6SF1-201ENST00000258909 ZNF214Q9UL59 606 aaPredicted RBP22.66■■□□□ 1.22
TM6SF1-201ENST00000258909 FAM47AQ5JRC9 791 aa22.66■■□□□ 1.22
TM6SF1-201ENST00000258909 MAML3Q96JK9 1138 aa22.66■■□□□ 1.22
TM6SF1-201ENST00000258909 SLF1Q9BQI6 1058 aa22.66■■□□□ 1.22
TM6SF1-201ENST00000258909 ZNF287Q9HBT7 754 aa22.66■■□□□ 1.22
TM6SF1-201ENST00000258909 MSCO60682 206 aa22.65■■□□□ 1.22
TM6SF1-201ENST00000258909 SLC4A3P48751 1232 aa22.65■■□□□ 1.22
TM6SF1-201ENST00000258909 PPARAQ07869 468 aa22.65■■□□□ 1.22
TM6SF1-201ENST00000258909 LRRC47Q8N1G4 583 aaKnown RBP22.65■■□□□ 1.22
TM6SF1-201ENST00000258909 GDF15Q99988 308 aa22.65■■□□□ 1.22
TM6SF1-201ENST00000258909 MTMR4Q9NYA4 1195 aa22.65■■□□□ 1.22
TM6SF1-201ENST00000258909 PLXNA1Q9UIW2 1896 aa22.64■■□□□ 1.22
TM6SF1-201ENST00000258909 FOXP2O15409 715 aa22.64■■□□□ 1.21
TM6SF1-201ENST00000258909 MYCNP04198 464 aaPredicted RBP22.64■■□□□ 1.21
TM6SF1-201ENST00000258909 TSPY3P0CV98 308 aa22.64■■□□□ 1.21
TM6SF1-201ENST00000258909 TSPY8P0CW00 308 aa22.64■■□□□ 1.21
TM6SF1-201ENST00000258909 HDAC1Q13547 482 aaPredicted RBP22.64■■□□□ 1.21
TM6SF1-201ENST00000258909 KCTD2Q14681 263 aa22.64■■□□□ 1.21
TM6SF1-201ENST00000258909 GJC2Q5T442 439 aaPredicted RBP22.64■■□□□ 1.21
TM6SF1-201ENST00000258909 CHMP4CQ96CF2 233 aa22.64■■□□□ 1.21
TM6SF1-201ENST00000258909 INCENPQ9NQS7 918 aa22.64■■□□□ 1.21
TM6SF1-201ENST00000258909 SMCHD1A6NHR9 2005 aa22.63■■□□□ 1.21
TM6SF1-201ENST00000258909 ATN1P54259 1190 aaPredicted RBP22.63■■□□□ 1.21
TM6SF1-201ENST00000258909 PDE1AP54750 535 aa22.63■■□□□ 1.21
TM6SF1-201ENST00000258909 TFAP4Q01664 338 aa22.63■■□□□ 1.21
TM6SF1-201ENST00000258909 PDE4BQ07343 736 aa22.63■■□□□ 1.21
TM6SF1-201ENST00000258909 RIPK3Q9Y572 518 aa22.63■■□□□ 1.21
TM6SF1-201ENST00000258909 TTLL1O95922 423 aa22.62■■□□□ 1.21
TM6SF1-201ENST00000258909 SLC3A2P08195 630 aaKnown RBP22.62■■□□□ 1.21
TM6SF1-201ENST00000258909 MAGEA10P43363 369 aaPredicted RBP22.62■■□□□ 1.21
TM6SF1-201ENST00000258909 CTDSPL2Q05D32 466 aa22.62■■□□□ 1.21
TM6SF1-201ENST00000258909 VPS53Q5VIR6 699 aa22.62■■□□□ 1.21
TM6SF1-201ENST00000258909 SNRNP48Q6IEG0 339 aaKnown RBP22.62■■□□□ 1.21
TM6SF1-201ENST00000258909 CPXCR1Q8N123 301 aa22.62■■□□□ 1.21
TM6SF1-201ENST00000258909 NEDD1Q8NHV4 660 aa22.62■■□□□ 1.21
TM6SF1-201ENST00000258909 MKL1Q969V6 931 aa22.62■■□□□ 1.21
TM6SF1-201ENST00000258909 KIFC2Q96AC6 838 aa22.62■■□□□ 1.21
TM6SF1-201ENST00000258909 DNM1LO00429 736 aa22.61■■□□□ 1.21
TM6SF1-201ENST00000258909 SOX1O00570 391 aaPredicted RBP22.61■■□□□ 1.21
TM6SF1-201ENST00000258909 SEPT4O43236 478 aa22.61■■□□□ 1.21
TM6SF1-201ENST00000258909 PRPF38AQ8NAV1 312 aaKnown RBP22.61■■□□□ 1.21
TM6SF1-201ENST00000258909 EVI5LQ96CN4 794 aa22.61■■□□□ 1.21
TM6SF1-201ENST00000258909 TEX13BQ9BXU2 312 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms