RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 APOBRQ0VD83 1088 aa15.01□□□□□ -0.01
PRPF38A-201ENST00000257181 TMX3Q96JJ7 454 aa15.01□□□□□ -0.01
PRPF38A-201ENST00000257181 MRVI1Q9Y6F6 885 aa15.01□□□□□ -0.01
PRPF38A-201ENST00000257181 MROH7-TTC4A0A0A0MT08 1334 aa15□□□□□ -0.01
PRPF38A-201ENST00000257181 PSAPP07602 524 aa15□□□□□ -0.01
PRPF38A-201ENST00000257181 SRGAP2BP0DMP2 458 aa15□□□□□ -0.01
PRPF38A-201ENST00000257181 KYAT1Q16773 422 aa15□□□□□ -0.01
PRPF38A-201ENST00000257181 AOC3Q16853 763 aa15□□□□□ -0.01
PRPF38A-201ENST00000257181 USH1GQ495M9 461 aa15□□□□□ -0.01
PRPF38A-201ENST00000257181 GCNAQ96QF7 691 aa15□□□□□ -0.01
PRPF38A-201ENST00000257181 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15□□□□□ -0.01
PRPF38A-201ENST00000257181 MINPP1Q9UNW1 487 aa15□□□□□ -0.01
PRPF38A-201ENST00000257181 ADD2P35612 726 aa15□□□□□ -0.01
PRPF38A-201ENST00000257181 TEX2Q8IWB9 1127 aa15□□□□□ -0.01
PRPF38A-201ENST00000257181 AXIN2Q9Y2T1 843 aa15□□□□□ -0.01
PRPF38A-201ENST00000257181 CETN3O15182 167 aa15□□□□□ -0.01
PRPF38A-201ENST00000257181 JAK3P52333 1124 aa15□□□□□ -0.01
PRPF38A-201ENST00000257181 PCDHA1Q9Y5I3 950 aa15□□□□□ -0.01
PRPF38A-201ENST00000257181 KLRF2D3W0D1 207 aa15□□□□□ -0.01
PRPF38A-201ENST00000257181 FCGRTP55899 365 aa15□□□□□ -0.01
PRPF38A-201ENST00000257181 PLA2G4DQ86XP0 818 aa15□□□□□ -0.01
PRPF38A-201ENST00000257181 NACA2Q9H009 215 aa15□□□□□ -0.01
PRPF38A-201ENST00000257181 ZMYM6O95789 1325 aa14.99□□□□□ -0.01
PRPF38A-201ENST00000257181 ZNF157P51786 506 aaPredicted RBP14.99□□□□□ -0.01
PRPF38A-201ENST00000257181 SP4Q02446 784 aa14.99□□□□□ -0.01
PRPF38A-201ENST00000257181 BIRC3Q13489 604 aa14.99□□□□□ -0.01
PRPF38A-201ENST00000257181 MAP9Q49MG5 647 aa14.99□□□□□ -0.01
PRPF38A-201ENST00000257181 ZMYM1Q5SVZ6 1142 aa14.99□□□□□ -0.01
PRPF38A-201ENST00000257181 SAMD3Q8N6K7 520 aa14.99□□□□□ -0.01
PRPF38A-201ENST00000257181 C20orf194Q5TEA3 1177 aa14.99□□□□□ -0.01
PRPF38A-201ENST00000257181 DGKHQ86XP1 1220 aa14.99□□□□□ -0.01
PRPF38A-201ENST00000257181 WRNIP1Q96S55 665 aa14.99□□□□□ -0.01
PRPF38A-201ENST00000257181 STAP2Q9UGK3 403 aa14.99□□□□□ -0.01
PRPF38A-201ENST00000257181 EIF3JO75822 258 aaKnown RBP14.99□□□□□ -0.01
PRPF38A-201ENST00000257181 GAP43P17677 238 aa14.99□□□□□ -0.01
PRPF38A-201ENST00000257181 NEDD9Q14511 834 aa14.99□□□□□ -0.01
PRPF38A-201ENST00000257181 PRR5LQ6MZQ0 368 aa14.99□□□□□ -0.01
PRPF38A-201ENST00000257181 ANKRD13AQ8IZ07 590 aa14.99□□□□□ -0.01
PRPF38A-201ENST00000257181 FAM212AQ96EL1 285 aa14.99□□□□□ -0.01
PRPF38A-201ENST00000257181 CSRNP2Q9H175 543 aa14.99□□□□□ -0.01
PRPF38A-201ENST00000257181 NUCKS1Q9H1E3 243 aaKnown RBP14.99□□□□□ -0.01
PRPF38A-201ENST00000257181 SH3GLB2Q9NR46 395 aa14.99□□□□□ -0.01
PRPF38A-201ENST00000257181 MYZAPP0CAP1 466 aa14.99□□□□□ -0.01
PRPF38A-201ENST00000257181 FCER1AP12319 257 aa14.99□□□□□ -0.01
PRPF38A-201ENST00000257181 LMAN1P49257 510 aa14.99□□□□□ -0.01
PRPF38A-201ENST00000257181 ZNF354CQ86Y25 554 aa14.99□□□□□ -0.01
PRPF38A-201ENST00000257181 CNOT7Q9UIV1 285 aaKnown RBP14.99□□□□□ -0.01
PRPF38A-201ENST00000257181 STK10O94804 968 aaKnown RBP14.98□□□□□ -0.01
PRPF38A-201ENST00000257181 BLIDQ8IZY5 108 aa14.98□□□□□ -0.01
PRPF38A-201ENST00000257181 NEK11Q8NG66 645 aa14.98□□□□□ -0.01
PRPF38A-201ENST00000257181 NEK9Q8TD19 979 aa14.98□□□□□ -0.01
PRPF38A-201ENST00000257181 SNX29Q8TEQ0 813 aa14.98□□□□□ -0.01
PRPF38A-201ENST00000257181 TBC1D32Q96NH3 1257 aa14.98□□□□□ -0.01
PRPF38A-201ENST00000257181 SELENOOQ9BVL4 669 aa14.98□□□□□ -0.01
PRPF38A-201ENST00000257181 SERPINA10Q9UK55 444 aa14.98□□□□□ -0.01
PRPF38A-201ENST00000257181 PHKA1P46020 1223 aa14.98□□□□□ -0.01
PRPF38A-201ENST00000257181 TBC1D10BQ4KMP7 808 aaPredicted RBP14.98□□□□□ -0.01
PRPF38A-201ENST00000257181 NEK8Q86SG6 692 aa14.98□□□□□ -0.01
PRPF38A-201ENST00000257181 CACTINQ8WUQ7 758 aaKnown RBP14.98□□□□□ -0.01
PRPF38A-201ENST00000257181 TSHZ2Q9NRE2 1034 aa14.98□□□□□ -0.01
PRPF38A-201ENST00000257181 ZNF277Q9NRM2 450 aaPredicted RBP14.98□□□□□ -0.01
PRPF38A-201ENST00000257181 ZHX1Q9UKY1 873 aaPredicted RBP14.98□□□□□ -0.01
PRPF38A-201ENST00000257181 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.98□□□□□ -0.01
PRPF38A-201ENST00000257181 PTPREP23469 700 aa14.98□□□□□ -0.01
PRPF38A-201ENST00000257181 TUBB4BP68371 445 aa14.98□□□□□ -0.01
PRPF38A-201ENST00000257181 TTLL4Q14679 1199 aa14.98□□□□□ -0.01
PRPF38A-201ENST00000257181 MICALL2Q8IY33 904 aa14.98□□□□□ -0.01
PRPF38A-201ENST00000257181 ZNF34Q8IZ26 560 aa14.98□□□□□ -0.01
PRPF38A-201ENST00000257181 LARSQ9P2J5 1176 aaKnown RBP14.98□□□□□ -0.01
PRPF38A-201ENST00000257181 N4BP3O15049 544 aa14.98□□□□□ -0.01
PRPF38A-201ENST00000257181 CYP2E1P05181 493 aaPredicted RBP14.98□□□□□ -0.01
PRPF38A-201ENST00000257181 RASAL2Q9UJF2 1139 aa14.98□□□□□ -0.01
PRPF38A-201ENST00000257181 PXDNLA1KZ92 1463 aa14.97□□□□□ -0.01
PRPF38A-201ENST00000257181 ZNF233A6NK53 670 aa14.97□□□□□ -0.01
PRPF38A-201ENST00000257181 KIF28PB7ZC32 967 aa14.97□□□□□ -0.01
PRPF38A-201ENST00000257181 TYW5A2RUC4 315 aaKnown RBP14.97□□□□□ -0.01
PRPF38A-201ENST00000257181 F13A1P00488 732 aa14.97□□□□□ -0.01
PRPF38A-201ENST00000257181 SCG2P13521 617 aa14.97□□□□□ -0.01
PRPF38A-201ENST00000257181 POLR2BP30876 1174 aaKnown RBP14.97□□□□□ -0.01
PRPF38A-201ENST00000257181 CTDSPL2Q05D32 466 aa14.97□□□□□ -0.01
PRPF38A-201ENST00000257181 DMP1Q13316 513 aaPredicted RBP14.97□□□□□ -0.01
PRPF38A-201ENST00000257181 MTX1Q13505 466 aa14.97□□□□□ -0.01
PRPF38A-201ENST00000257181 STXBP2Q15833 593 aa14.97□□□□□ -0.01
PRPF38A-201ENST00000257181 AK8Q96MA6 479 aa14.97□□□□□ -0.01
PRPF38A-201ENST00000257181 COMMD10Q9Y6G5 202 aa14.97□□□□□ -0.01
PRPF38A-201ENST00000257181 SLC7A3Q8WY07 619 aa14.97□□□□□ -0.01
PRPF38A-201ENST00000257181 PCDHB15Q9Y5E8 787 aa14.97□□□□□ -0.01
PRPF38A-201ENST00000257181 KRT10P13645 584 aa14.97□□□□□ -0.01
PRPF38A-201ENST00000257181 NFKBIAP25963 317 aa14.97□□□□□ -0.01
PRPF38A-201ENST00000257181 TAF1CQ15572 869 aaPredicted RBP14.97□□□□□ -0.01
PRPF38A-201ENST00000257181 LRRC24Q50LG9 513 aa14.97□□□□□ -0.01
PRPF38A-201ENST00000257181 IFT122Q9HBG6 1241 aa14.97□□□□□ -0.01
PRPF38A-201ENST00000257181 ATP2A1O14983 1001 aa14.96□□□□□ -0.01
PRPF38A-201ENST00000257181 HSPD1P10809 573 aaKnown RBP14.96□□□□□ -0.01
PRPF38A-201ENST00000257181 POLGP54098 1239 aaPredicted RBP14.96□□□□□ -0.01
PRPF38A-201ENST00000257181 KRT83P78385 493 aa14.96□□□□□ -0.01
PRPF38A-201ENST00000257181 BBXQ8WY36 941 aaPredicted RBP14.96□□□□□ -0.01
PRPF38A-201ENST00000257181 SEC31BQ9NQW1 1179 aa14.96□□□□□ -0.01
PRPF38A-201ENST00000257181 WDR19Q8NEZ3 1342 aa14.96□□□□□ -0.01
PRPF38A-201ENST00000257181 E7EWF7 191 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms