RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 TNNT1P13805 278 aa21.35■■□□□ 1.01
PDLIM4-201ENST00000253754 CASP1P29466 404 aa21.35■■□□□ 1.01
PDLIM4-201ENST00000253754 FMR1Q06787 632 aaKnown RBP eCLIP21.35■■□□□ 1.01
PDLIM4-201ENST00000253754 ELOA2Q8IYF1 753 aaPredicted RBP21.35■■□□□ 1.01
PDLIM4-201ENST00000253754 HOOK1Q9UJC3 728 aaKnown RBP21.35■■□□□ 1.01
PDLIM4-201ENST00000253754 FAM205AQ6ZU69 1335 aa21.35■■□□□ 1.01
PDLIM4-201ENST00000253754 RRP9O43818 475 aaKnown RBP21.34■■□□□ 1.01
PDLIM4-201ENST00000253754 SERPINC1P01008 464 aa21.34■■□□□ 1.01
PDLIM4-201ENST00000253754 BTDP43251 543 aa21.34■■□□□ 1.01
PDLIM4-201ENST00000253754 GSDMDP57764 484 aa21.34■■□□□ 1.01
PDLIM4-201ENST00000253754 C10orf71Q711Q0 1435 aa21.34■■□□□ 1.01
PDLIM4-201ENST00000253754 RASGRP2Q7LDG7 609 aa21.34■■□□□ 1.01
PDLIM4-201ENST00000253754 C7orf43Q8WVR3 580 aa21.34■■□□□ 1.01
PDLIM4-201ENST00000253754 SMARCE1Q969G3 411 aa21.34■■□□□ 1.01
PDLIM4-201ENST00000253754 TRMT1Q9NXH9 659 aaKnown RBP21.34■■□□□ 1.01
PDLIM4-201ENST00000253754 IMPACTQ9P2X3 320 aa21.34■■□□□ 1.01
PDLIM4-201ENST00000253754 IGSF3O75054 1194 aa21.34■■□□□ 1.01
PDLIM4-201ENST00000253754 TSPY3P0CV98 308 aa21.34■■□□□ 1.01
PDLIM4-201ENST00000253754 TSPY8P0CW00 308 aa21.34■■□□□ 1.01
PDLIM4-201ENST00000253754 SARSP49591 514 aaKnown RBP21.34■■□□□ 1.01
PDLIM4-201ENST00000253754 NT5DC1Q5TFE4 455 aa21.34■■□□□ 1.01
PDLIM4-201ENST00000253754 TRMT44Q8IYL2 757 aaKnown RBP21.34■■□□□ 1.01
PDLIM4-201ENST00000253754 ROBO3Q96MS0 1386 aa21.33■■□□□ 1.01
PDLIM4-201ENST00000253754 VWA3AA6NCI4 1184 aa21.33■■□□□ 1.01
PDLIM4-201ENST00000253754 LDHCP07864 332 aa21.33■■□□□ 1.01
PDLIM4-201ENST00000253754 GTF2F1P35269 517 aaKnown RBP eCLIP21.33■■□□□ 1.01
PDLIM4-201ENST00000253754 AFMP43652 599 aa21.33■■□□□ 1.01
PDLIM4-201ENST00000253754 UBASH3AP57075 661 aa21.33■■□□□ 1.01
PDLIM4-201ENST00000253754 PPP4CP60510 307 aa21.33■■□□□ 1.01
PDLIM4-201ENST00000253754 PTGDRQ13258 359 aa21.33■■□□□ 1.01
PDLIM4-201ENST00000253754 SLC35G1Q2M3R5 365 aa21.33■■□□□ 1.01
PDLIM4-201ENST00000253754 DGKHQ86XP1 1220 aa21.33■■□□□ 1.01
PDLIM4-201ENST00000253754 NOL10Q9BSC4 688 aaKnown RBP21.33■■□□□ 1.01
PDLIM4-201ENST00000253754 DBNDD1Q9H9R9 158 aa21.33■■□□□ 1.01
PDLIM4-201ENST00000253754 TMEM232C9JQI7 657 aa21.32■■□□□ 1
PDLIM4-201ENST00000253754 C21orf2O43822 256 aa21.32■■□□□ 1
PDLIM4-201ENST00000253754 KIF5BP33176 963 aa21.32■■□□□ 1
PDLIM4-201ENST00000253754 MORC3Q14149 939 aa21.32■■□□□ 1
PDLIM4-201ENST00000253754 TYW1BQ6NUM6 668 aa21.32■■□□□ 1
PDLIM4-201ENST00000253754 RASGRP4Q8TDF6 673 aa21.32■■□□□ 1
PDLIM4-201ENST00000253754 MAD2L2Q9UI95 211 aa21.32■■□□□ 1
PDLIM4-201ENST00000253754 STX8Q9UNK0 236 aa21.32■■□□□ 1
PDLIM4-201ENST00000253754 MCM7P33993 719 aa21.31■■□□□ 1
PDLIM4-201ENST00000253754 CFAP100Q494V2 611 aa21.31■■□□□ 1
PDLIM4-201ENST00000253754 MED15Q96RN5 788 aa21.31■■□□□ 1
PDLIM4-201ENST00000253754 RASA1P20936 1047 aa21.31■■□□□ 1
PDLIM4-201ENST00000253754 ZNF444Q8N0Y2 327 aaPredicted RBP21.31■■□□□ 1
PDLIM4-201ENST00000253754 TTLL6Q8N841 843 aa21.31■■□□□ 1
PDLIM4-201ENST00000253754 MXD3Q9BW11 206 aa21.31■■□□□ 1
PDLIM4-201ENST00000253754 F8W031 263 aaPredicted RBP21.3■■□□□ 1
PDLIM4-201ENST00000253754 DPEP1P16444 411 aa21.3■■□□□ 1
PDLIM4-201ENST00000253754 ATP2C1P98194 919 aaPredicted RBP21.3■■□□□ 1
PDLIM4-201ENST00000253754 IL17AQ16552 155 aa21.3■■□□□ 1
PDLIM4-201ENST00000253754 AMOTL1Q8IY63 956 aa21.3■■□□□ 1
PDLIM4-201ENST00000253754 FERMT2Q96AC1 680 aa21.3■■□□□ 1
PDLIM4-201ENST00000253754 KCNQ5Q9NR82 932 aa21.3■■□□□ 1
PDLIM4-201ENST00000253754 INTS13Q9NVM9 706 aa21.3■■□□□ 1
PDLIM4-201ENST00000253754 GOLGA8HP0CJ92 632 aa21.3■■□□□ 1
PDLIM4-201ENST00000253754 SFPQP23246 707 aaKnown RBP eCLIP21.3■■□□□ 1
PDLIM4-201ENST00000253754 GOLGA8FQ08AF8 430 aa21.3■■□□□ 1
PDLIM4-201ENST00000253754 GOLGA8DPQ0D2H9 430 aa21.3■■□□□ 1
PDLIM4-201ENST00000253754 GRM4Q14833 912 aa21.3■■□□□ 1
PDLIM4-201ENST00000253754 TEX11Q8IYF3 940 aa21.3■■□□□ 1
PDLIM4-201ENST00000253754 CCAR2Q8N163 923 aaKnown RBP21.3■■□□□ 1
PDLIM4-201ENST00000253754 CERS5Q8N5B7 392 aa21.3■■□□□ 1
PDLIM4-201ENST00000253754 ZNF592Q92610 1267 aa21.3■■□□□ 1
PDLIM4-201ENST00000253754 PAGE5Q96GU1 130 aa21.3■■□□□ 1
PDLIM4-201ENST00000253754 TMEM47Q9BQJ4 181 aa21.3■■□□□ 1
PDLIM4-201ENST00000253754 CPVLQ9H3G5 476 aa21.3■■□□□ 1
PDLIM4-201ENST00000253754 MORC2Q9Y6X9 1032 aaPredicted RBP21.3■■□□□ 1
PDLIM4-201ENST00000253754 NAV1Q8NEY1 1877 aa21.29■■□□□ 1
PDLIM4-201ENST00000253754 CYTH3O43739 400 aa21.29■■□□□ 1
PDLIM4-201ENST00000253754 ZNF710Q8N1W2 664 aa21.29■■□□□ 1
PDLIM4-201ENST00000253754 CCDC150Q8NCX0 1101 aa21.29■■□□□ 1
PDLIM4-201ENST00000253754 SPATA20Q8TB22 786 aa21.29■■□□□ 1
PDLIM4-201ENST00000253754 ANKS1AQ92625 1134 aa21.29■■□□□ 1
PDLIM4-201ENST00000253754 STAMQ92783 540 aa21.29■■□□□ 1
PDLIM4-201ENST00000253754 MTFR1LQ9H019 292 aa21.29■■□□□ 1
PDLIM4-201ENST00000253754 NFE2L3Q9Y4A8 694 aa21.29■■□□□ 1
PDLIM4-201ENST00000253754 FLT1P17948 1338 aa21.29■■□□□ 1
PDLIM4-201ENST00000253754 SLFN14P0C7P3 912 aa21.29■■□□□ 1
PDLIM4-201ENST00000253754 KCNA3P22001 575 aa21.29■■□□□ 1
PDLIM4-201ENST00000253754 KANK3Q6NY19 840 aa21.29■■□□□ 1
PDLIM4-201ENST00000253754 PODNQ7Z5L7 613 aa21.29■■□□□ 1
PDLIM4-201ENST00000253754 MLKLQ8NB16 471 aa21.29■■□□□ 1
PDLIM4-201ENST00000253754 GPR75-ASB3A0A0A6YYF3 556 aa21.28■■□□□ 1
PDLIM4-201ENST00000253754 BMP15O95972 392 aa21.28■■□□□ 1
PDLIM4-201ENST00000253754 AOC3Q16853 763 aa21.28■■□□□ 1
PDLIM4-201ENST00000253754 SLF2Q8IX21 1173 aa21.28■■□□□ 1
PDLIM4-201ENST00000253754 BLIDQ8IZY5 108 aa21.28■■□□□ 1
PDLIM4-201ENST00000253754 SNED1Q8TER0 1413 aa21.28■■□□□ 1
PDLIM4-201ENST00000253754 RHBDL3P58872 404 aa21.27■■□□□ 1
PDLIM4-201ENST00000253754 CEP135Q66GS9 1140 aa21.27■■□□□ 1
PDLIM4-201ENST00000253754 E4F1Q66K89 784 aaPredicted RBP21.27■■□□□ 1
PDLIM4-201ENST00000253754 WWC2Q6AWC2 1192 aa21.27■■□□□ 1
PDLIM4-201ENST00000253754 CC2D2BQ6DHV5 1058 aa21.27■■□□□ 1
PDLIM4-201ENST00000253754 NYAP1Q6ZVC0 841 aa21.27■■□□□ 1
PDLIM4-201ENST00000253754 CDK8P49336 464 aa21.27■■□□□ 1
PDLIM4-201ENST00000253754 SH3RF1Q7Z6J0 888 aa21.27■■□□□ 1
PDLIM4-201ENST00000253754 SMYD4Q8IYR2 804 aaPredicted RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms