RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 CCZ1BP86790 482 aa28.71■■■□□ 2.19
TMEM55B-201ENST00000250489 CCZ1P86791 482 aaPredicted RBP28.71■■■□□ 2.19
TMEM55B-201ENST00000250489 WWC2Q6AWC2 1192 aa28.71■■■□□ 2.19
TMEM55B-201ENST00000250489 SH3RF1Q7Z6J0 888 aa28.71■■■□□ 2.19
TMEM55B-201ENST00000250489 CCDC34Q96HJ3 373 aa28.71■■■□□ 2.19
TMEM55B-201ENST00000250489 ZC3H12CQ9C0D7 883 aaKnown RBP28.71■■■□□ 2.19
TMEM55B-201ENST00000250489 M0R2N6 131 aa28.7■■■□□ 2.19
TMEM55B-201ENST00000250489 TMC6Q7Z403 805 aa28.7■■■□□ 2.19
TMEM55B-201ENST00000250489 COL11A2P13942 1736 aaPredicted RBP28.7■■■□□ 2.19
TMEM55B-201ENST00000250489 MCM7P33993 719 aa28.7■■■□□ 2.18
TMEM55B-201ENST00000250489 CERS5Q8N5B7 392 aa28.7■■■□□ 2.18
TMEM55B-201ENST00000250489 DAGLBQ8NCG7 672 aa28.7■■■□□ 2.18
TMEM55B-201ENST00000250489 CCDC148Q8NFR7 591 aa28.7■■■□□ 2.18
TMEM55B-201ENST00000250489 DACH1Q9UI36 760 aa28.7■■■□□ 2.18
TMEM55B-201ENST00000250489 SKILP12757 684 aa28.69■■■□□ 2.18
TMEM55B-201ENST00000250489 NOVP48745 357 aa28.69■■■□□ 2.18
TMEM55B-201ENST00000250489 SPZ1Q9BXG8 430 aa28.69■■■□□ 2.18
TMEM55B-201ENST00000250489 FANCLQ9NW38 375 aa28.69■■■□□ 2.18
TMEM55B-201ENST00000250489 BARHL2Q9NY43 387 aa28.69■■■□□ 2.18
TMEM55B-201ENST00000250489 KLRF2D3W0D1 207 aa28.68■■■□□ 2.18
TMEM55B-201ENST00000250489 STXBP3O00186 592 aa28.68■■■□□ 2.18
TMEM55B-201ENST00000250489 GOLGA8HP0CJ92 632 aa28.68■■■□□ 2.18
TMEM55B-201ENST00000250489 ALDH1B1P30837 517 aa28.68■■■□□ 2.18
TMEM55B-201ENST00000250489 PDE6BP35913 854 aa28.68■■■□□ 2.18
TMEM55B-201ENST00000250489 MYRIPQ8NFW9 859 aa28.68■■■□□ 2.18
TMEM55B-201ENST00000250489 PAGE5Q96GU1 130 aa28.68■■■□□ 2.18
TMEM55B-201ENST00000250489 APBA3O96018 575 aa28.68■■■□□ 2.18
TMEM55B-201ENST00000250489 TOP1P11387 765 aaKnown RBP28.68■■■□□ 2.18
TMEM55B-201ENST00000250489 GALNT17Q6IS24 598 aa28.68■■■□□ 2.18
TMEM55B-201ENST00000250489 DPP8Q6V1X1 898 aaPredicted RBP28.68■■■□□ 2.18
TMEM55B-201ENST00000250489 RASGRP2Q7LDG7 609 aa28.68■■■□□ 2.18
TMEM55B-201ENST00000250489 HEATR3Q7Z4Q2 680 aa28.68■■■□□ 2.18
TMEM55B-201ENST00000250489 CEP95Q96GE4 821 aa28.68■■■□□ 2.18
TMEM55B-201ENST00000250489 CBFA2T2O43439 604 aa28.67■■■□□ 2.18
TMEM55B-201ENST00000250489 IL17AQ16552 155 aa28.67■■■□□ 2.18
TMEM55B-201ENST00000250489 FAM177A1Q8N128 213 aaPredicted RBP28.67■■■□□ 2.18
TMEM55B-201ENST00000250489 RASGRP4Q8TDF6 673 aa28.67■■■□□ 2.18
TMEM55B-201ENST00000250489 F8W031 263 aaPredicted RBP28.66■■■□□ 2.18
TMEM55B-201ENST00000250489 MMP10P09238 476 aa28.66■■■□□ 2.18
TMEM55B-201ENST00000250489 PARP1P09874 1014 aaKnown RBP28.66■■■□□ 2.18
TMEM55B-201ENST00000250489 C4orf32Q8N8J7 132 aa28.66■■■□□ 2.18
TMEM55B-201ENST00000250489 CCDC150Q8NCX0 1101 aa28.66■■■□□ 2.18
TMEM55B-201ENST00000250489 FLAD1Q8NFF5 587 aa28.66■■■□□ 2.18
TMEM55B-201ENST00000250489 DPF2Q92785 391 aa28.66■■■□□ 2.18
TMEM55B-201ENST00000250489 PCDHA6Q9UN73 950 aa28.66■■■□□ 2.18
TMEM55B-201ENST00000250489 PCDHA8Q9Y5H6 950 aa28.66■■■□□ 2.18
TMEM55B-201ENST00000250489 SERPINC1P01008 464 aa28.66■■■□□ 2.18
TMEM55B-201ENST00000250489 AFMP43652 599 aa28.66■■■□□ 2.18
TMEM55B-201ENST00000250489 UBASH3AP57075 661 aa28.66■■■□□ 2.18
TMEM55B-201ENST00000250489 FMR1Q06787 632 aaKnown RBP eCLIP28.66■■■□□ 2.18
TMEM55B-201ENST00000250489 PICALMQ13492 652 aa28.66■■■□□ 2.18
TMEM55B-201ENST00000250489 ARL6IP4Q66PJ3 421 aaKnown RBP28.66■■■□□ 2.18
TMEM55B-201ENST00000250489 TTF2Q9UNY4 1162 aaKnown RBP28.66■■■□□ 2.18
TMEM55B-201ENST00000250489 PARP3Q9Y6F1 533 aa28.66■■■□□ 2.18
TMEM55B-201ENST00000250489 PLIN4Q96Q06 1357 aa28.66■■■□□ 2.18
TMEM55B-201ENST00000250489 DOK7Q18PE1 504 aa28.65■■■□□ 2.18
TMEM55B-201ENST00000250489 ENOX1Q8TC92 643 aaKnown RBP28.65■■■□□ 2.18
TMEM55B-201ENST00000250489 MASTLQ96GX5 879 aa28.65■■■□□ 2.18
TMEM55B-201ENST00000250489 CCDC194A0A1B0GVG4 234 aa28.64■■■□□ 2.18
TMEM55B-201ENST00000250489 GABPAQ06546 454 aa28.64■■■□□ 2.18
TMEM55B-201ENST00000250489 E2F4Q16254 413 aa28.64■■■□□ 2.18
TMEM55B-201ENST00000250489 ARMCX5Q6P1M9 558 aa28.64■■■□□ 2.18
TMEM55B-201ENST00000250489 DYNC1I1O14576 645 aa28.64■■■□□ 2.17
TMEM55B-201ENST00000250489 DPYDQ12882 1025 aa28.64■■■□□ 2.17
TMEM55B-201ENST00000250489 DHX8Q14562 1220 aaKnown RBP28.64■■■□□ 2.17
TMEM55B-201ENST00000250489 USP17L2Q6R6M4 530 aa28.64■■■□□ 2.17
TMEM55B-201ENST00000250489 MXD3Q9BW11 206 aa28.64■■■□□ 2.17
TMEM55B-201ENST00000250489 CPVLQ9H3G5 476 aa28.64■■■□□ 2.17
TMEM55B-201ENST00000250489 DDX4Q9NQI0 724 aaKnown RBP28.63■■■□□ 2.17
TMEM55B-201ENST00000250489 SMARCA1P28370 1054 aa28.62■■■□□ 2.17
TMEM55B-201ENST00000250489 C16orf45Q96MC5 204 aaPredicted RBP28.62■■■□□ 2.17
TMEM55B-201ENST00000250489 PYM1Q9BRP8 204 aaKnown RBP28.62■■■□□ 2.17
TMEM55B-201ENST00000250489 NFE2L3Q9Y4A8 694 aa28.62■■■□□ 2.17
TMEM55B-201ENST00000250489 ERCC5P28715 1186 aaPredicted RBP28.62■■■□□ 2.17
TMEM55B-201ENST00000250489 LONP1P36776 959 aaKnown RBP28.62■■■□□ 2.17
TMEM55B-201ENST00000250489 CFAP100Q494V2 611 aa28.62■■■□□ 2.17
TMEM55B-201ENST00000250489 IQUBQ8NA54 791 aa28.62■■■□□ 2.17
TMEM55B-201ENST00000250489 MED15Q96RN5 788 aa28.62■■■□□ 2.17
TMEM55B-201ENST00000250489 ZNF18P17022 549 aa28.61■■■□□ 2.17
TMEM55B-201ENST00000250489 CASP1P29466 404 aa28.61■■■□□ 2.17
TMEM55B-201ENST00000250489 TPD52L1Q16890 204 aaPredicted RBP28.61■■■□□ 2.17
TMEM55B-201ENST00000250489 CT47A1Q5JQC4 288 aaPredicted RBP28.61■■■□□ 2.17
TMEM55B-201ENST00000250489 GSDMAQ96QA5 445 aa28.61■■■□□ 2.17
TMEM55B-201ENST00000250489 ZMYND12Q9H0C1 365 aa28.61■■■□□ 2.17
TMEM55B-201ENST00000250489 TRMT44Q8IYL2 757 aaKnown RBP28.61■■■□□ 2.17
TMEM55B-201ENST00000250489 TMX4Q9H1E5 349 aaPredicted RBP28.61■■■□□ 2.17
TMEM55B-201ENST00000250489 USP40Q9NVE5 1235 aa28.61■■■□□ 2.17
TMEM55B-201ENST00000250489 ADAMTSL1Q8N6G6 1762 aa28.6■■■□□ 2.17
TMEM55B-201ENST00000250489 SFPQP23246 707 aaKnown RBP eCLIP28.6■■■□□ 2.17
TMEM55B-201ENST00000250489 ZNF772Q68DY9 489 aaPredicted RBP28.6■■■□□ 2.17
TMEM55B-201ENST00000250489 PDXDC2PQ6P474 469 aa28.6■■■□□ 2.17
TMEM55B-201ENST00000250489 CCDC12Q8WUD4 166 aaPredicted RBP28.6■■■□□ 2.17
TMEM55B-201ENST00000250489 RRP36Q96EU6 259 aaKnown RBP28.6■■■□□ 2.17
TMEM55B-201ENST00000250489 KCND1Q9NSA2 647 aa28.6■■■□□ 2.17
TMEM55B-201ENST00000250489 MTMR4Q9NYA4 1195 aa28.6■■■□□ 2.17
TMEM55B-201ENST00000250489 IGKV6D-41A0A0C4DH26 115 aa28.59■■■□□ 2.17
TMEM55B-201ENST00000250489 GTF2F1P35269 517 aaKnown RBP eCLIP28.59■■■□□ 2.17
TMEM55B-201ENST00000250489 SCNN1DP51172 638 aa28.59■■■□□ 2.17
TMEM55B-201ENST00000250489 NAPAP54920 295 aa28.59■■■□□ 2.17
TMEM55B-201ENST00000250489 INF2Q27J81 1249 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms