RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 CCDC129Q6ZRS4 1044 aa19.3■□□□□ 0.68
CLPP-201ENST00000245816 AMOTL1Q8IY63 956 aa19.3■□□□□ 0.68
CLPP-201ENST00000245816 IFNL3Q8IZI9 196 aa19.3■□□□□ 0.68
CLPP-201ENST00000245816 ANKLE1Q8NAG6 615 aa19.3■□□□□ 0.68
CLPP-201ENST00000245816 NUP88Q99567 741 aaPredicted RBP19.3■□□□□ 0.68
CLPP-201ENST00000245816 ARHGEF10LQ9HCE6 1279 aa19.3■□□□□ 0.68
CLPP-201ENST00000245816 INCENPQ9NQS7 918 aa19.3■□□□□ 0.68
CLPP-201ENST00000245816 DNAH12Q6ZR08 3092 aa19.3■□□□□ 0.68
CLPP-201ENST00000245816 FLOT1O75955 427 aa19.29■□□□□ 0.68
CLPP-201ENST00000245816 ADORA2AP29274 412 aa19.29■□□□□ 0.68
CLPP-201ENST00000245816 CCNA1P78396 465 aa19.29■□□□□ 0.68
CLPP-201ENST00000245816 B4GALNT3Q6L9W6 998 aa19.29■□□□□ 0.68
CLPP-201ENST00000245816 NECAB2Q7Z6G3 386 aa19.29■□□□□ 0.68
CLPP-201ENST00000245816 LPAR1Q92633 364 aa19.29■□□□□ 0.68
CLPP-201ENST00000245816 FSD1Q9BTV5 496 aa19.29■□□□□ 0.68
CLPP-201ENST00000245816 KANSL2Q9H9L4 492 aa19.29■□□□□ 0.68
CLPP-201ENST00000245816 FRMPD3Q5JV73 1810 aa19.29■□□□□ 0.68
CLPP-201ENST00000245816 ZNF236Q9UL36 1845 aa19.29■□□□□ 0.68
CLPP-201ENST00000245816 PATL2C9JE40 543 aaKnown RBP19.28■□□□□ 0.68
CLPP-201ENST00000245816 WDR46O15213 610 aaKnown RBP19.28■□□□□ 0.68
CLPP-201ENST00000245816 ATP2B2Q01814 1243 aa19.28■□□□□ 0.68
CLPP-201ENST00000245816 FAM83BQ5T0W9 1011 aa19.28■□□□□ 0.68
CLPP-201ENST00000245816 CCAR1Q8IX12 1150 aaKnown RBP19.28■□□□□ 0.68
CLPP-201ENST00000245816 TRMT44Q8IYL2 757 aaKnown RBP19.28■□□□□ 0.68
CLPP-201ENST00000245816 SHCBP1Q8NEM2 672 aa19.28■□□□□ 0.68
CLPP-201ENST00000245816 CAPN2P17655 700 aa19.27■□□□□ 0.68
CLPP-201ENST00000245816 VPS53Q5VIR6 699 aa19.27■□□□□ 0.68
CLPP-201ENST00000245816 PLEKHM2Q8IWE5 1019 aa19.27■□□□□ 0.68
CLPP-201ENST00000245816 ZNF214Q9UL59 606 aaPredicted RBP19.27■□□□□ 0.68
CLPP-201ENST00000245816 EVI5O60447 810 aa19.26■□□□□ 0.67
CLPP-201ENST00000245816 CYBAP13498 195 aa19.26■□□□□ 0.67
CLPP-201ENST00000245816 PRAMEF19Q5SWL8 479 aa19.26■□□□□ 0.67
CLPP-201ENST00000245816 SAMD1Q6SPF0 538 aaPredicted RBP19.26■□□□□ 0.67
CLPP-201ENST00000245816 NBPF3Q9H094 633 aa19.26■□□□□ 0.67
CLPP-201ENST00000245816 C11orf49Q9H6J7 331 aa19.26■□□□□ 0.67
CLPP-201ENST00000245816 NYAP2Q9P242 653 aa19.26■□□□□ 0.67
CLPP-201ENST00000245816 PPP1R9AQ9ULJ8 1098 aa19.26■□□□□ 0.67
CLPP-201ENST00000245816 ZNFX1Q9P2E3 1918 aaKnown RBP19.25■□□□□ 0.67
CLPP-201ENST00000245816 VWA5AO00534 786 aa19.25■□□□□ 0.67
CLPP-201ENST00000245816 NDUFB10O96000 172 aa19.25■□□□□ 0.67
CLPP-201ENST00000245816 CEP95Q96GE4 821 aa19.25■□□□□ 0.67
CLPP-201ENST00000245816 ZMYND8Q9ULU4 1186 aaPredicted RBP19.25■□□□□ 0.67
CLPP-201ENST00000245816 RIPK3Q9Y572 518 aa19.25■□□□□ 0.67
CLPP-201ENST00000245816 F5H6K3 240 aa19.24■□□□□ 0.67
CLPP-201ENST00000245816 KLRC3Q07444 240 aa19.24■□□□□ 0.67
CLPP-201ENST00000245816 PLS1Q14651 629 aa19.24■□□□□ 0.67
CLPP-201ENST00000245816 LRRC26Q2I0M4 334 aa19.24■□□□□ 0.67
CLPP-201ENST00000245816 FAM47AQ5JRC9 791 aa19.24■□□□□ 0.67
CLPP-201ENST00000245816 NCAPG2Q86XI2 1143 aa19.24■□□□□ 0.67
CLPP-201ENST00000245816 C7orf61Q8IZ16 206 aa19.24■□□□□ 0.67
CLPP-201ENST00000245816 MB21D1Q8N884 522 aa19.24■□□□□ 0.67
CLPP-201ENST00000245816 MKL1Q969V6 931 aa19.24■□□□□ 0.67
CLPP-201ENST00000245816 GDF15Q99988 308 aa19.24■□□□□ 0.67
CLPP-201ENST00000245816 NACAP1Q9BZK3 213 aa19.24■□□□□ 0.67
CLPP-201ENST00000245816 MKNK2Q9HBH9 465 aa19.24■□□□□ 0.67
CLPP-201ENST00000245816 CWC22Q9HCG8 908 aaKnown RBP19.24■□□□□ 0.67
CLPP-201ENST00000245816 HELLSQ9NRZ9 838 aa19.24■□□□□ 0.67
CLPP-201ENST00000245816 CLIP2Q9UDT6 1046 aa19.24■□□□□ 0.67
CLPP-201ENST00000245816 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.24■□□□□ 0.67
CLPP-201ENST00000245816 NR2E3Q9Y5X4 410 aa19.24■□□□□ 0.67
CLPP-201ENST00000245816 SOX1O00570 391 aaPredicted RBP19.23■□□□□ 0.67
CLPP-201ENST00000245816 STRNO43815 780 aa19.23■□□□□ 0.67
CLPP-201ENST00000245816 PGK2P07205 417 aa19.23■□□□□ 0.67
CLPP-201ENST00000245816 SYN1P17600 705 aa19.23■□□□□ 0.67
CLPP-201ENST00000245816 TDO2P48775 406 aa19.23■□□□□ 0.67
CLPP-201ENST00000245816 ANO1Q5XXA6 986 aa19.23■□□□□ 0.67
CLPP-201ENST00000245816 OLFML2BQ68BL8 750 aa19.23■□□□□ 0.67
CLPP-201ENST00000245816 RIOX2Q8IUF8 465 aa19.23■□□□□ 0.67
CLPP-201ENST00000245816 MAML3Q96JK9 1138 aa19.23■□□□□ 0.67
CLPP-201ENST00000245816 SH2D4AQ9H788 454 aa19.23■□□□□ 0.67
CLPP-201ENST00000245816 MTMR4Q9NYA4 1195 aa19.23■□□□□ 0.67
CLPP-201ENST00000245816 DDX20Q9UHI6 824 aaKnown RBP19.23■□□□□ 0.67
CLPP-201ENST00000245816 IVNS1ABPQ9Y6Y0 642 aa19.23■□□□□ 0.67
CLPP-201ENST00000245816 APPP05067 770 aa19.22■□□□□ 0.67
CLPP-201ENST00000245816 TAL1P17542 331 aaPredicted RBP19.22■□□□□ 0.67
CLPP-201ENST00000245816 PPARAQ07869 468 aa19.22■□□□□ 0.67
CLPP-201ENST00000245816 MFSD14CQ5VZR4 134 aa19.22■□□□□ 0.67
CLPP-201ENST00000245816 ERICH6BQ5W0A0 696 aa19.22■□□□□ 0.67
CLPP-201ENST00000245816 RASGRP2Q7LDG7 609 aa19.22■□□□□ 0.67
CLPP-201ENST00000245816 DPP9Q86TI2 863 aa19.22■□□□□ 0.67
CLPP-201ENST00000245816 FAM227BQ96M60 508 aa19.22■□□□□ 0.67
CLPP-201ENST00000245816 MROH8Q9H579 483 aa19.22■□□□□ 0.67
CLPP-201ENST00000245816 MYH4Q9Y623 1939 aa19.21■□□□□ 0.67
CLPP-201ENST00000245816 STAT3P40763 770 aa19.21■□□□□ 0.67
CLPP-201ENST00000245816 CTDSPL2Q05D32 466 aa19.21■□□□□ 0.67
CLPP-201ENST00000245816 ZNF792Q3KQV3 632 aa19.21■□□□□ 0.67
CLPP-201ENST00000245816 ABRAQ8N0Z2 381 aa19.21■□□□□ 0.67
CLPP-201ENST00000245816 LRRC47Q8N1G4 583 aaKnown RBP19.21■□□□□ 0.67
CLPP-201ENST00000245816 NEDD1Q8NHV4 660 aa19.21■□□□□ 0.67
CLPP-201ENST00000245816 ZNF287Q9HBT7 754 aa19.21■□□□□ 0.67
CLPP-201ENST00000245816 GOPCQ9HD26 462 aa19.21■□□□□ 0.67
CLPP-201ENST00000245816 IL17RBQ9NRM6 502 aa19.21■□□□□ 0.67
CLPP-201ENST00000245816 PLIN4Q96Q06 1357 aa19.2■□□□□ 0.66
CLPP-201ENST00000245816 A0A0D9SFI3 127 aa19.2■□□□□ 0.66
CLPP-201ENST00000245816 TRIM6-TRIM34B2RNG4 842 aa19.2■□□□□ 0.66
CLPP-201ENST00000245816 RAD21O60216 631 aa19.2■□□□□ 0.66
CLPP-201ENST00000245816 MCMDC2Q4G0Z9 681 aa19.2■□□□□ 0.66
CLPP-201ENST00000245816 SMCHD1A6NHR9 2005 aa19.2■□□□□ 0.66
CLPP-201ENST00000245816 HIP1O00291 1037 aa19.19■□□□□ 0.66
CLPP-201ENST00000245816 NMT2O60551 498 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms