RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 MMRN2Q9H8L6 949 aa12.94□□□□□ -0.34
SOX9-201ENST00000245479 CNNM2Q9H8M5 875 aa12.94□□□□□ -0.34
SOX9-201ENST00000245479 TTF2Q9UNY4 1162 aaKnown RBP12.94□□□□□ -0.34
SOX9-201ENST00000245479 C3P01024 1663 aa12.93□□□□□ -0.34
SOX9-201ENST00000245479 TEX33O43247 280 aa12.93□□□□□ -0.34
SOX9-201ENST00000245479 KRT86O43790 486 aa12.93□□□□□ -0.34
SOX9-201ENST00000245479 PLA2G4AP47712 749 aa12.93□□□□□ -0.34
SOX9-201ENST00000245479 TUBB2AQ13885 445 aa12.93□□□□□ -0.34
SOX9-201ENST00000245479 TRIM47Q96LD4 638 aa12.93□□□□□ -0.34
SOX9-201ENST00000245479 TUBB2BQ9BVA1 445 aa12.93□□□□□ -0.34
SOX9-201ENST00000245479 MED4Q9NPJ6 270 aa12.93□□□□□ -0.34
SOX9-201ENST00000245479 CDC23Q9UJX2 597 aa12.93□□□□□ -0.34
SOX9-201ENST00000245479 SPTY2D1Q68D10 685 aaPredicted RBP12.93□□□□□ -0.34
SOX9-201ENST00000245479 ARMCX5Q6P1M9 558 aa12.93□□□□□ -0.34
SOX9-201ENST00000245479 NYAP1Q6ZVC0 841 aa12.93□□□□□ -0.34
SOX9-201ENST00000245479 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.93□□□□□ -0.34
SOX9-201ENST00000245479 PIK3C2AO00443 1686 aa12.93□□□□□ -0.34
SOX9-201ENST00000245479 A0A087WUV0 522 aaPredicted RBP12.93□□□□□ -0.34
SOX9-201ENST00000245479 STX10O60499 249 aa12.93□□□□□ -0.34
SOX9-201ENST00000245479 DEXIO95424 95 aa12.93□□□□□ -0.34
SOX9-201ENST00000245479 KRT18P05783 430 aaKnown RBP12.93□□□□□ -0.34
SOX9-201ENST00000245479 CYLC1P35663 651 aaPredicted RBP12.93□□□□□ -0.34
SOX9-201ENST00000245479 IL6STP40189 918 aaPredicted RBP12.93□□□□□ -0.34
SOX9-201ENST00000245479 NAPAP54920 295 aa12.93□□□□□ -0.34
SOX9-201ENST00000245479 UBE3CQ15386 1083 aa12.93□□□□□ -0.34
SOX9-201ENST00000245479 TBC1D9BQ66K14 1250 aa12.93□□□□□ -0.34
SOX9-201ENST00000245479 TAF4BQ92750 862 aa12.93□□□□□ -0.34
SOX9-201ENST00000245479 GJA10Q969M2 543 aa12.93□□□□□ -0.34
SOX9-201ENST00000245479 SLF1Q9BQI6 1058 aa12.93□□□□□ -0.34
SOX9-201ENST00000245479 OSBPL5Q9H0X9 879 aaPredicted RBP12.93□□□□□ -0.34
SOX9-201ENST00000245479 TXKP42681 527 aa12.92□□□□□ -0.34
SOX9-201ENST00000245479 CACNB3P54284 484 aa12.92□□□□□ -0.34
SOX9-201ENST00000245479 EARS2Q5JPH6 523 aaKnown RBP12.92□□□□□ -0.34
SOX9-201ENST00000245479 HPS3Q969F9 1004 aa12.92□□□□□ -0.34
SOX9-201ENST00000245479 LMTK3Q96Q04 1460 aa12.92□□□□□ -0.34
SOX9-201ENST00000245479 RNF40O75150 1001 aa12.92□□□□□ -0.34
SOX9-201ENST00000245479 TADA3O75528 432 aa12.92□□□□□ -0.34
SOX9-201ENST00000245479 TNNI2P48788 182 aa12.92□□□□□ -0.34
SOX9-201ENST00000245479 TTC38Q5R3I4 469 aa12.92□□□□□ -0.34
SOX9-201ENST00000245479 SND1Q7KZF4 910 aaKnown RBP eCLIP12.92□□□□□ -0.34
SOX9-201ENST00000245479 ZSCAN10Q96SZ4 725 aaPredicted RBP12.92□□□□□ -0.34
SOX9-201ENST00000245479 TMX4Q9H1E5 349 aaPredicted RBP12.92□□□□□ -0.34
SOX9-201ENST00000245479 SOWAHDA6NJG2 315 aa12.92□□□□□ -0.34
SOX9-201ENST00000245479 UFL1O94874 794 aa12.92□□□□□ -0.34
SOX9-201ENST00000245479 CCDC172P0C7W6 258 aa12.92□□□□□ -0.34
SOX9-201ENST00000245479 GNGT1P63211 74 aa12.92□□□□□ -0.34
SOX9-201ENST00000245479 UBXN1Q04323 297 aa12.92□□□□□ -0.34
SOX9-201ENST00000245479 FMR1Q06787 632 aaKnown RBP eCLIP12.92□□□□□ -0.34
SOX9-201ENST00000245479 DOK7Q18PE1 504 aa12.92□□□□□ -0.34
SOX9-201ENST00000245479 TPTE2Q6XPS3 522 aa12.92□□□□□ -0.34
SOX9-201ENST00000245479 LRRC47Q8N1G4 583 aaKnown RBP12.92□□□□□ -0.34
SOX9-201ENST00000245479 IGDCC4Q8TDY8 1250 aa12.92□□□□□ -0.34
SOX9-201ENST00000245479 ALS2CR12Q96Q35 445 aa12.92□□□□□ -0.34
SOX9-201ENST00000245479 ABCB6Q9NP58 842 aa12.92□□□□□ -0.34
SOX9-201ENST00000245479 BIN2Q9UBW5 565 aaPredicted RBP12.92□□□□□ -0.34
SOX9-201ENST00000245479 MYO6Q9UM54 1294 aa12.92□□□□□ -0.34
SOX9-201ENST00000245479 FHOD1Q9Y613 1164 aa12.92□□□□□ -0.34
SOX9-201ENST00000245479 ENC1O14682 589 aa12.91□□□□□ -0.34
SOX9-201ENST00000245479 FOXP2O15409 715 aa12.91□□□□□ -0.34
SOX9-201ENST00000245479 AKR1B10O60218 316 aa12.91□□□□□ -0.34
SOX9-201ENST00000245479 LDHBP07195 334 aaKnown RBP12.91□□□□□ -0.34
SOX9-201ENST00000245479 IFFO1Q0D2I5 559 aa12.91□□□□□ -0.34
SOX9-201ENST00000245479 TSGA10IPQ3SY00 556 aa12.91□□□□□ -0.34
SOX9-201ENST00000245479 TDRD12Q587J7 1177 aaKnown RBP12.91□□□□□ -0.34
SOX9-201ENST00000245479 METTL16Q86W50 562 aaKnown RBP12.91□□□□□ -0.34
SOX9-201ENST00000245479 FCHSD1Q86WN1 690 aa12.91□□□□□ -0.34
SOX9-201ENST00000245479 NBPF3Q9H094 633 aa12.91□□□□□ -0.34
SOX9-201ENST00000245479 CCDC113Q9H0I3 377 aa12.91□□□□□ -0.34
SOX9-201ENST00000245479 POLR3EQ9NVU0 708 aa12.91□□□□□ -0.34
SOX9-201ENST00000245479 SCAF8Q9UPN6 1271 aaKnown RBP12.91□□□□□ -0.34
SOX9-201ENST00000245479 RTCBQ9Y3I0 505 aaKnown RBP12.91□□□□□ -0.34
SOX9-201ENST00000245479 ZMYND10O75800 440 aa12.91□□□□□ -0.34
SOX9-201ENST00000245479 CACNB1Q02641 598 aaPredicted RBP12.91□□□□□ -0.34
SOX9-201ENST00000245479 MECOMQ03112 1051 aa12.91□□□□□ -0.34
SOX9-201ENST00000245479 CASP8Q14790 479 aa12.91□□□□□ -0.34
SOX9-201ENST00000245479 USP17L2Q6R6M4 530 aa12.91□□□□□ -0.34
SOX9-201ENST00000245479 FOXP4Q8IVH2 680 aaPredicted RBP12.91□□□□□ -0.34
SOX9-201ENST00000245479 STAG2Q8N3U4 1231 aa12.91□□□□□ -0.34
SOX9-201ENST00000245479 ENAHQ8N8S7 591 aaPredicted RBP12.91□□□□□ -0.34
SOX9-201ENST00000245479 MARCH10Q8NA82 808 aaPredicted RBP12.91□□□□□ -0.34
SOX9-201ENST00000245479 GPR108Q9NPR9 543 aa12.91□□□□□ -0.34
SOX9-201ENST00000245479 MROH5Q6ZUA9 1318 aa12.91□□□□□ -0.34
SOX9-201ENST00000245479 A0A1B0GUA9 196 aa12.91□□□□□ -0.34
SOX9-201ENST00000245479 MTIF2P46199 727 aaKnown RBP12.91□□□□□ -0.34
SOX9-201ENST00000245479 SNAP25P60880 206 aa12.91□□□□□ -0.34
SOX9-201ENST00000245479 ASIC1P78348 528 aa12.91□□□□□ -0.34
SOX9-201ENST00000245479 SPAG1Q07617 926 aa12.91□□□□□ -0.34
SOX9-201ENST00000245479 KIF5AQ12840 1032 aa12.91□□□□□ -0.34
SOX9-201ENST00000245479 ANKRD13CQ8N6S4 541 aa12.91□□□□□ -0.34
SOX9-201ENST00000245479 KANSL2Q9H9L4 492 aa12.91□□□□□ -0.34
SOX9-201ENST00000245479 MAN1B1Q9UKM7 699 aa12.91□□□□□ -0.34
SOX9-201ENST00000245479 TRIM49BA6NDI0 452 aa12.9□□□□□ -0.34
SOX9-201ENST00000245479 KRT9P35527 623 aa12.9□□□□□ -0.34
SOX9-201ENST00000245479 CFAP58Q5T655 872 aa12.9□□□□□ -0.34
SOX9-201ENST00000245479 TTC19Q6DKK2 380 aaPredicted RBP12.9□□□□□ -0.34
SOX9-201ENST00000245479 MCTP2Q6DN12 878 aa12.9□□□□□ -0.34
SOX9-201ENST00000245479 MMS22LQ6ZRQ5 1243 aa12.9□□□□□ -0.34
SOX9-201ENST00000245479 CRACR2BQ8N4Y2 399 aaPredicted RBP12.9□□□□□ -0.34
SOX9-201ENST00000245479 ENGASEQ8NFI3 743 aa12.9□□□□□ -0.34
SOX9-201ENST00000245479 IFT81Q8WYA0 676 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms